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The map label for this gene is yqaJ [H]

Identifier: 83718709

GI number: 83718709

Start: 127713

End: 128789

Strand: Reverse

Name: yqaJ [H]

Synonym: BTH_I0110

Alternate gene names: 83718709

Gene position: 128789-127713 (Counterclockwise)

Preceding gene: 83721065

Following gene: 83719939

Centisome position: 3.38

GC content: 62.21

Gene sequence:

>1077_bases
GTGAGTCACGTTTCTCCCGTTTTTTCTCACCCTCGGCCCGGTCAGGTTCGCCTGTCGGGCCGCATTGTTTTGAGAGGCAC
TATGAGTGCAGTGCAACCCGATGGGCCGGATACACGCCGGCCGGCGCTTAAGCTCGTCAAGACACAAGAACTGAGCCGTG
ACGATTGGCTCGCCGTGCGCCGCACTGGCATTGGTGGATCGGATGCCGCAGCGGCAGCGGGTCTCAATCCGTACATGAGC
ACCTTGGAGCTCTGGATGGATAAGACGGGACGTGCGGAGGGCCTGGCCGGACCCGATCCGAACGACACGACTTCTCCTAC
ATACTGGGGCACGCTGCTCGAGCCCATCGTCGCTGCGTCCTACACCAAGCAAACCGGCAATCGTGTCCGGCGCATCAATG
CGGTCCTGCGTCACCCGACTATCCCGTTCATGCTCGCCAACATCGATCGGGAGGTCGTGGGATGCCGGGAGGTGCAATTG
CTCGAATGCAAGACCGCTGGCGAGTACGGCGCACGGCTTTGGCGAGCGGGCGTGCCCGAATATGTCGAATTGCAGGTACA
GCACCAGCTCGCCGTCACGGGCAAGCAGGCAGCACACGTTGCCGTGCTGCTGTGCGGACAGGCGTTGGAGGTCTATCGGA
TCGAACGAGACGACGCACTGATCGGCCGGCTCGTCGAACTCGAAGCGCGCTTCTGGCGGTACGTCGAATCCGATACACCT
CCACCTGCGGACGGGTCAGAGTCAGCCGATCGAGCGCTGCGCCACCTCTATCCCGGCAACGGCGGCACGGTCGACTTCAC
GGACGATCGGCAGCTCTCATCGGTGTTCGCCGATCTCGTTGCCGTACGCGCGCAGATTGAGACGCACCAGGCGATCGAAG
CCCAGTTGAAACAGGCAATCCAGCAGGCTATGGGCGAAGCAACGCGCGCCGTTTTCGAAACCGGAGCAGTTTCGTTCAAA
CGCAGCCGAGATTCGTCAACGGTCGATCTGGCGCGGCTGCTCGCCGACCACCCTGAGTTGGAACAGCAATACGCCGGATC
GAAACCCGGTACCCGGCGCTTCCTGATCTCCGCTTGA

Upstream 100 bases:

>100_bases
GCCGTGCGCGCAGCGATGACCACCGGCGCGATGCTGCGTGGTTCGGACAGGGCGCGACCATCAAGCAGCGTGCGTGGGAT
GAAGCGCTCAAGCTCGTTGT

Downstream 100 bases:

>100_bases
TTCCGTTCCCCACTTTCATTTCCGAGGACCACCATGCTCAAGGGTCTTTCCATCACGCCGCCTGTTGTCGGGCGGATTTC
GATTGGGCGCATCGTCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSHVSPVFSHPRPGQVRLSGRIVLRGTMSAVQPDGPDTRRPALKLVKTQELSRDDWLAVRRTGIGGSDAAAAAGLNPYMS
TLELWMDKTGRAEGLAGPDPNDTTSPTYWGTLLEPIVAASYTKQTGNRVRRINAVLRHPTIPFMLANIDREVVGCREVQL
LECKTAGEYGARLWRAGVPEYVELQVQHQLAVTGKQAAHVAVLLCGQALEVYRIERDDALIGRLVELEARFWRYVESDTP
PPADGSESADRALRHLYPGNGGTVDFTDDRQLSSVFADLVAVRAQIETHQAIEAQLKQAIQQAMGEATRAVFETGAVSFK
RSRDSSTVDLARLLADHPELEQQYAGSKPGTRRFLISA

Sequences:

>Translated_358_residues
MSHVSPVFSHPRPGQVRLSGRIVLRGTMSAVQPDGPDTRRPALKLVKTQELSRDDWLAVRRTGIGGSDAAAAAGLNPYMS
TLELWMDKTGRAEGLAGPDPNDTTSPTYWGTLLEPIVAASYTKQTGNRVRRINAVLRHPTIPFMLANIDREVVGCREVQL
LECKTAGEYGARLWRAGVPEYVELQVQHQLAVTGKQAAHVAVLLCGQALEVYRIERDDALIGRLVELEARFWRYVESDTP
PPADGSESADRALRHLYPGNGGTVDFTDDRQLSSVFADLVAVRAQIETHQAIEAQLKQAIQQAMGEATRAVFETGAVSFK
RSRDSSTVDLARLLADHPELEQQYAGSKPGTRRFLISA
>Mature_357_residues
SHVSPVFSHPRPGQVRLSGRIVLRGTMSAVQPDGPDTRRPALKLVKTQELSRDDWLAVRRTGIGGSDAAAAAGLNPYMST
LELWMDKTGRAEGLAGPDPNDTTSPTYWGTLLEPIVAASYTKQTGNRVRRINAVLRHPTIPFMLANIDREVVGCREVQLL
ECKTAGEYGARLWRAGVPEYVELQVQHQLAVTGKQAAHVAVLLCGQALEVYRIERDDALIGRLVELEARFWRYVESDTPP
PADGSESADRALRHLYPGNGGTVDFTDDRQLSSVFADLVAVRAQIETHQAIEAQLKQAIQQAMGEATRAVFETGAVSFKR
SRDSSTVDLARLLADHPELEQQYAGSKPGTRRFLISA

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 39275; Mature: 39144

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHVSPVFSHPRPGQVRLSGRIVLRGTMSAVQPDGPDTRRPALKLVKTQELSRDDWLAVR
CCCCCCCCCCCCCCEEEEEEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
RTGIGGSDAAAAAGLNPYMSTLELWMDKTGRAEGLAGPDPNDTTSPTYWGTLLEPIVAAS
ECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YTKQTGNRVRRINAVLRHPTIPFMLANIDREVVGCREVQLLECKTAGEYGARLWRAGVPE
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCEEEEEECCCCHHHHHHHHCCCCH
YVELQVQHQLAVTGKQAAHVAVLLCGQALEVYRIERDDALIGRLVELEARFWRYVESDTP
HHEEEEHHHHHHCCCHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCC
PPADGSESADRALRHLYPGNGGTVDFTDDRQLSSVFADLVAVRAQIETHQAIEAQLKQAI
CCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQAMGEATRAVFETGAVSFKRSRDSSTVDLARLLADHPELEQQYAGSKPGTRRFLISA
HHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure 
SHVSPVFSHPRPGQVRLSGRIVLRGTMSAVQPDGPDTRRPALKLVKTQELSRDDWLAVR
CCCCCCCCCCCCCEEEEEEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
RTGIGGSDAAAAAGLNPYMSTLELWMDKTGRAEGLAGPDPNDTTSPTYWGTLLEPIVAAS
ECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YTKQTGNRVRRINAVLRHPTIPFMLANIDREVVGCREVQLLECKTAGEYGARLWRAGVPE
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCEEEEEECCCCHHHHHHHHCCCCH
YVELQVQHQLAVTGKQAAHVAVLLCGQALEVYRIERDDALIGRLVELEARFWRYVESDTP
HHEEEEHHHHHHCCCHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCC
PPADGSESADRALRHLYPGNGGTVDFTDDRQLSSVFADLVAVRAQIETHQAIEAQLKQAI
CCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQAMGEATRAVFETGAVSFKRSRDSSTVDLARLLADHPELEQQYAGSKPGTRRFLISA
HHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]