Click here to switch to the map view.

The map label for this gene is yecS [H]

Identifier: 83718672

GI number: 83718672

Start: 2865948

End: 2866772

Strand: Direct

Name: yecS [H]

Synonym: BTH_I2513

Alternate gene names: 83718672

Gene position: 2865948-2866772 (Clockwise)

Preceding gene: 83719983

Following gene: 83720308

Centisome position: 75.24

GC content: 66.18

Gene sequence:

>825_bases
GTGGTTCGGCATCGACGTGACGAAGCCCGTCAAGTAAGCGCGTCATCCGTAGTCCCGCCGCGCCATCCGGCGGCAAACGA
GGGCGGCATCCGCAACGGTGCCGCCCTTTGCGTTGCGCGCCCGGTTTATGATTGCGCTTTCGCGTACGCCTCGTCCCCGC
TTCAGATGCCGATCACTTCCCTCCTCGCCCAATCACTCCCGGTCTTGCTCCAGGGTGCGCTTCTGACCGTCAAGTTTGCC
GTGCTGTCGATGCTGTTCGGGCTCGTCGGCGCCGTCGTGCTCGCGCTGATGGGCATCGGCGGCAGCCGGGTGCTGGCCGG
CCTCGCGCGCGCGTACGTGAGCGTGATGCGCGGCACGCCGCTTCTCGTGCAGATCTTCGTCATCTATTACGGACTGCCAA
GCCTCGGCGTGTCGCTCGATCCGACGCCCGCCGGCGTGATCGCGCTGTCCGCGAACGTCGCCGCTTACATGTCCGAAAGC
ATGCGCGGCGCGATCAACGGGATCGAGAAAGGACAATGGCTCGCCGCATACAGCCTCGGGCTGTCGTGGCGGCAGACGCT
GCGCTACGTGATCGGCCCGCAGGCGCTGCGCATCGCGGTGCCGAGCCTGTCGAACAGTCTCATCAGCCTGATCAAGGACA
CGTCGCTCGTGTCGGTGATCACCGTCACCGAGCTCTTGCGCAGCGCACAGGAGATCATCGCATCGACCTATCAGCCGCTG
CCGCTCTATCTCGCCGCGGCGGGGGTCTACTGGGTGCTGTGCCAGATCCTCGAATGGGTGCAGCGCTGGTACGAGCGCCG
GCTCGCGCTGCCGAGCCGGCATTGA

Upstream 100 bases:

>100_bases
GCATTCCGTTCAGGAAGGGCAATCCGAAGTTCGCGAAAGCGATCGCCGACGCGATGACGCAGCTCGAGGCCGACGGCACG
TTCACGAAGATCTCCGACAA

Downstream 100 bases:

>100_bases
GCGGAATCGCGCGTCGCCCGGTGCGACCGGCGTGGCGCCATGCGCCGACCGCCGGCTCGCTCGGCGGCGGGCAAGCCGCG
CGGCCTATGCCCCATGACCC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MVRHRRDEARQVSASSVVPPRHPAANEGGIRNGAALCVARPVYDCAFAYASSPLQMPITSLLAQSLPVLLQGALLTVKFA
VLSMLFGLVGAVVLALMGIGGSRVLAGLARAYVSVMRGTPLLVQIFVIYYGLPSLGVSLDPTPAGVIALSANVAAYMSES
MRGAINGIEKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPL
PLYLAAAGVYWVLCQILEWVQRWYERRLALPSRH

Sequences:

>Translated_274_residues
MVRHRRDEARQVSASSVVPPRHPAANEGGIRNGAALCVARPVYDCAFAYASSPLQMPITSLLAQSLPVLLQGALLTVKFA
VLSMLFGLVGAVVLALMGIGGSRVLAGLARAYVSVMRGTPLLVQIFVIYYGLPSLGVSLDPTPAGVIALSANVAAYMSES
MRGAINGIEKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPL
PLYLAAAGVYWVLCQILEWVQRWYERRLALPSRH
>Mature_274_residues
MVRHRRDEARQVSASSVVPPRHPAANEGGIRNGAALCVARPVYDCAFAYASSPLQMPITSLLAQSLPVLLQGALLTVKFA
VLSMLFGLVGAVVLALMGIGGSRVLAGLARAYVSVMRGTPLLVQIFVIYYGLPSLGVSLDPTPAGVIALSANVAAYMSES
MRGAINGIEKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPL
PLYLAAAGVYWVLCQILEWVQRWYERRLALPSRH

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=47.6635514018692, Blast_Score=198, Evalue=3e-52,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=39.906103286385, Blast_Score=134, Evalue=9e-33,
Organism=Escherichia coli, GI1787086, Length=222, Percent_Identity=33.7837837837838, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788646, Length=222, Percent_Identity=30.1801801801802, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787087, Length=217, Percent_Identity=31.3364055299539, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=32.7014218009479, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=32.8638497652582, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082239, Length=170, Percent_Identity=33.5294117647059, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786874, Length=185, Percent_Identity=28.1081081081081, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI48994930, Length=168, Percent_Identity=30.952380952381, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29487; Mature: 29487

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]