Click here to switch to the map view.

The map label for this gene is ycjO [C]

Identifier: 83718626

GI number: 83718626

Start: 801290

End: 802399

Strand: Direct

Name: ycjO [C]

Synonym: BTH_I0696

Alternate gene names: 83718626

Gene position: 801290-802399 (Clockwise)

Preceding gene: 83720816

Following gene: 83720775

Centisome position: 21.04

GC content: 68.29

Gene sequence:

>1110_bases
TTGCAGCGGGGCAGGCGGCGGCCGATCGCGCGGTGCGCCAGGCCGGCTACCGGAAGTGAAGCGCCGCGCGCGCCGCGCCC
GCACGAGGCGCGGCGCGCGCGGCATCGCCGTCACGCGGGCGCAAGCGCTGCACGCGCCCGCGCATCGAAAGAGGTGGTCC
CGATCATGCGTCACTTACGTCTTCCTCTCGCTCACTCGGCGCCGCTCAGCGACGCGGGGCGCGCCGCGGGCGGGCGCGCG
CGCGGCAAGCCGGCGCGCTGGCTCGCGACGCCGTCCGTCGCCGTGCTGTTCCTGTGGATGGCGATTCCGCTCGCGATGAC
GATCTGGTTCTCGCTCACGCGCTACAACCTGCTGAATCCGGACGTCAAGGGCTTCGCCGGCCTCGACAACTACCGCTTCC
TCGCGACCGACCCGTCGTTCCTGCCGGCGATCTGGCACACGCTCGCGCTGATCGGCGCGGTGCTCGCGATCACGGTCGCG
GGCGGCGTGCTGATGGCCGTGCTGTTCGACCGCAAGTTCTACGGGCAGGGCATCGCGCGCCTCATCGCGATCGCGCCGTT
CTTCGTGATGCCGACGGTGTCGGCGCTCATCTGGAAGAACATGATCCTGCATCCGGTGTACGGGCTCGTCGCGCGCGCGA
TGCTCGCGCTCGGGATGCAGCCGATCGACTGGTTCGCGCAGTATCCGCTCGCCTCGATCGTGATGATCGTCGCGTGGCAG
TGGCTGCCGTTCGCGTTCCTGATTCTGTTCACCGCGATCCAGTCGCTCGACCAGGAGCAGAAGGAAGCCGCGCGGATCGA
CGGCGCGGGCCCGTTCGCGATGTTCTTCTACATCACGCTGCCGCATCTGAGGCGCGCGATCGCGGTCGTCGTGATGATGG
AGACGATCTTCCTGCTGTCGATCTTCGCCGAAATCTACACGACGACGGGCGGCGGCCCGGGCGACGCGACGACGAACCTG
TCGTACCTGATCTACGCGCTCGGGCTGCAGCAGTTCGACGTCGGGCTCGCGTCGGCGGGCGGCATTCTCGCCGTCGTGCT
CGCGAACGTCGTGTCGTTCTTCCTCGTGAGAATGCTCGCGCGAAATCTGAAAGGGGAGTACGAAGCATGA

Upstream 100 bases:

>100_bases
ATCCAGTATGTCGGGATTCCTGAATTCCAGTCGTTCGGCACGGTGGTCGGCCAGGCGATCGCGGGCGCGGTCGCGGGGCA
GATGAGCGTCGATCAGGCGC

Downstream 100 bases:

>100_bases
GCGATCTGACCGTATCGGCTTCAAGCGGCGGGCTGCCCGCCGCGCTCGGCGCGGTGAGGCGCGCGCTGCCGGGCCTGCTT
GCGTGGCTCGTCGCGCTCGC

Product: mannitol ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MQRGRRRPIARCARPATGSEAPRAPRPHEARRARHRRHAGASAARARASKEVVPIMRHLRLPLAHSAPLSDAGRAAGGRA
RGKPARWLATPSVAVLFLWMAIPLAMTIWFSLTRYNLLNPDVKGFAGLDNYRFLATDPSFLPAIWHTLALIGAVLAITVA
GGVLMAVLFDRKFYGQGIARLIAIAPFFVMPTVSALIWKNMILHPVYGLVARAMLALGMQPIDWFAQYPLASIVMIVAWQ
WLPFAFLILFTAIQSLDQEQKEAARIDGAGPFAMFFYITLPHLRRAIAVVVMMETIFLLSIFAEIYTTTGGGPGDATTNL
SYLIYALGLQQFDVGLASAGGILAVVLANVVSFFLVRMLARNLKGEYEA

Sequences:

>Translated_369_residues
MQRGRRRPIARCARPATGSEAPRAPRPHEARRARHRRHAGASAARARASKEVVPIMRHLRLPLAHSAPLSDAGRAAGGRA
RGKPARWLATPSVAVLFLWMAIPLAMTIWFSLTRYNLLNPDVKGFAGLDNYRFLATDPSFLPAIWHTLALIGAVLAITVA
GGVLMAVLFDRKFYGQGIARLIAIAPFFVMPTVSALIWKNMILHPVYGLVARAMLALGMQPIDWFAQYPLASIVMIVAWQ
WLPFAFLILFTAIQSLDQEQKEAARIDGAGPFAMFFYITLPHLRRAIAVVVMMETIFLLSIFAEIYTTTGGGPGDATTNL
SYLIYALGLQQFDVGLASAGGILAVVLANVVSFFLVRMLARNLKGEYEA
>Mature_369_residues
MQRGRRRPIARCARPATGSEAPRAPRPHEARRARHRRHAGASAARARASKEVVPIMRHLRLPLAHSAPLSDAGRAAGGRA
RGKPARWLATPSVAVLFLWMAIPLAMTIWFSLTRYNLLNPDVKGFAGLDNYRFLATDPSFLPAIWHTLALIGAVLAITVA
GGVLMAVLFDRKFYGQGIARLIAIAPFFVMPTVSALIWKNMILHPVYGLVARAMLALGMQPIDWFAQYPLASIVMIVAWQ
WLPFAFLILFTAIQSLDQEQKEAARIDGAGPFAMFFYITLPHLRRAIAVVVMMETIFLLSIFAEIYTTTGGGPGDATTNL
SYLIYALGLQQFDVGLASAGGILAVVLANVVSFFLVRMLARNLKGEYEA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=31.1538461538462, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=26.8707482993197, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790465, Length=266, Percent_Identity=27.4436090225564, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40478; Mature: 40478

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRGRRRPIARCARPATGSEAPRAPRPHEARRARHRRHAGASAARARASKEVVPIMRHLR
CCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
LPLAHSAPLSDAGRAAGGRARGKPARWLATPSVAVLFLWMAIPLAMTIWFSLTRYNLLNP
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVKGFAGLDNYRFLATDPSFLPAIWHTLALIGAVLAITVAGGVLMAVLFDRKFYGQGIAR
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAIAPFFVMPTVSALIWKNMILHPVYGLVARAMLALGMQPIDWFAQYPLASIVMIVAWQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHH
WLPFAFLILFTAIQSLDQEQKEAARIDGAGPFAMFFYITLPHLRRAIAVVVMMETIFLLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFAEIYTTTGGGPGDATTNLSYLIYALGLQQFDVGLASAGGILAVVLANVVSFFLVRMLA
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHH
RNLKGEYEA
HHCCCCCCC
>Mature Secondary Structure
MQRGRRRPIARCARPATGSEAPRAPRPHEARRARHRRHAGASAARARASKEVVPIMRHLR
CCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
LPLAHSAPLSDAGRAAGGRARGKPARWLATPSVAVLFLWMAIPLAMTIWFSLTRYNLLNP
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVKGFAGLDNYRFLATDPSFLPAIWHTLALIGAVLAITVAGGVLMAVLFDRKFYGQGIAR
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAIAPFFVMPTVSALIWKNMILHPVYGLVARAMLALGMQPIDWFAQYPLASIVMIVAWQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHH
WLPFAFLILFTAIQSLDQEQKEAARIDGAGPFAMFFYITLPHLRRAIAVVVMMETIFLLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFAEIYTTTGGGPGDATTNLSYLIYALGLQQFDVGLASAGGILAVVLANVVSFFLVRMLA
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHH
RNLKGEYEA
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]