Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is 83718625

Identifier: 83718625

GI number: 83718625

Start: 3671318

End: 3674098

Strand: Direct

Name: 83718625

Synonym: BTH_I3225

Alternate gene names: NA

Gene position: 3671318-3674098 (Clockwise)

Preceding gene: 83719866

Following gene: 83719543

Centisome position: 96.38

GC content: 67.46

Gene sequence:

>2781_bases
GTGACCAATTTGAACGATACGCTACGCAATTTTGCGTCGGGGGCGGTCGACTGGAATAAACGTCCGGTCGCGTTGCACTT
TGGCGCCGCGCAAGGCGCGCTGGGCCACCTCCTCGCGTTGCAACACGCCAGTGTTCAGGAAGGTCTGATGACCGGGATTG
GCGGGCGATTGACCTGTGTTTCGACCCGTCGCGACATCCCACCCGGCGTGTTTCTCGGCATGCCGGTCTCGATCCGGCTC
ATTACCGATCGCGGACAGCCGCACATGGTGAACGCGATCATCAGCGACGTCCAGATCGGCCAAAGCGACGGCGAGCTCTG
TGTGTACCAGCTGACGGTCTGCGACGCGCTGTCGCTGATGGACAAGCGCACCAATTCGCGGGTCTTCCGAAAGCGCAGCG
TCATCGATGTGCTCGCCACGCTGTTCAACGAATGGCAGCAGCGCAGCCCGGCCCTCGCGCGCGCATTCGAATTCGATCTG
TCCGGCTTGCGCGCCGATCGCTATCCGCCCCGCGAACTGACCCGGCAAGTCAACGAATCGGATGCGCATTTCGTGCGCCG
TCTGCTGCGCCGCGAAGGGATCACCGTGTTCGCGAAGGCGGGGCCGGCGAAGGGCGAACAGCCGTTGCAGGGCGATGCGA
CCGTGCACACGCTCGTGTGCTGTGACGAGCCGATGTCGCTGCCGCAAGCGCCGGCCGGCACGGTTCGCTTGCATCCGCGC
GACGCCGGCACCGAGCAGCGCGACACGGTCACGCTGTTCGCGCTGCGTCGGCAATTGGTGCCCGGCAAGGCCGGACGCCC
GTCGTGGGACTACAAGAAGGCGCGGATCGACGAATCGAGCGTCGCTTCGAGCCTCGATCAGGGCGAGGCGGGCAACGATC
TGGCGAAGCTGCTGACCGACATCGCGATCGACATTCCGCACGCGGGCGATTCATGGAGCGATCACGAGCGGCTCACCCGC
GCGCGCATGCTCGCGCACGAGTTCGAGGCCGAGCGCTACGACGGCGTTAGCAGCGTGCGGGATCTGGCCGTGGGCGCGTG
GATCACGCTGACGGGCGATCCGGACTGGGACAGGCAACTCGCCGACAAGCGCCAGTTCGTGATCACGTCGATCGATCATG
ACATCTGGAACAACCTGCCGAAGGGGCTCAATGACCGCGTGCACGCGCTGTTCGCCGCGAGCCGCAATCTCGTGAACGCG
CCCGGCGCGCTGCCGGCCGCGCTTGCGAACGACGCGGATACGCGCTACGAGAACACGTTCACCTGCGTGCGCCGCGGCGT
GCCGCTTGCGCCCGCGTACGATCCGCAAGCCGATTTGCCGCCCGTGCATCTGCTCACGGGCACGATCGTCGGCGCGGAGG
GCGAGGAAGTGTTCTGCGACGAAAACGGCCGGGTGCGCGTGCGGGTGCACGGCCTCGACCCGGCGGACCACGCGCACGCG
CAGGGCGCGGGCACCAACGACAACGCGGGCGACAGCGCGCCGATCCGCGTGGCGTCGAGCCTCGCCGGCGCCCATTTCGG
CGCATCGTTTCTGCCGCGAGTCGGCATGGAAGTCCTCCTCGGCTGTCTCGGCGGCGATCCGGACCGGTTGGTGATCATCG
GCGTGCTCGGTAACGGCGCGAATCCGCCGGCGACGTTCAGCCATGCGGGCGGCTTGCCGGGCAACCGCTACCTGTCCGGC
ATCAAGACGAAGGAGATCAAGGGGCAGCGGTACAACCAGCTGCGTCTCGACGACACGCCGAACCAGATCAGCGCGCAACT
GGCGAGCGAGCATGCGCATTCGCAGCTCAATCTCGGATACCTGACCCAACCGCGCGAGAACGGTCATGGCAACGACCGCG
GCGAGGGCGCGGAGCTGCGTACCGACGCGGCGGCGGCGCTGCGGGCGGCGCAAGGCATTCTGCTGACGACCTACGCGCGC
ACGCAGGCGAGCGGCGGGCAACTGGACCGTGACGAGCTGATTCGGTTGCTCGGCGAGTGCTCGGAGCTGTTCAAGGCGCT
GGGCGACTACGCGGGGCAGCACGGCGGGCAGGCTGCGGATACGGCCGGCCAGCACGCGGTGGCCGCCGCCTTCAGGAACT
GGACGCCGGGCGCGGGCGGCGCCGATGCGCCGCCCGACGGCGGAGATCGCGCGCTGATGGCGTTCGGCGCGCAGGCCGGC
TCGGTGAACGTCACGCCGAAGACGCACGTGACGTATGCCGGAGAGAACATCGATCAGGTTGCGCAGCAGCACCTGCAACT
GATGAGCGGCCAGCGGCTGAACGCGACGGCCGGGCAGGGCATGCAACTCTTCGCGCGGGGCGCGGGCGTGCAGGCCGTGG
CGGGCGAAGGGCCGATGCTGCTGCAGGCGCAAGCCGATACGTTGACGGCGAATGCGCAGAAGGGCGTCAAGATCACGACG
AACGAGCACGAGGTGTTCGTGAGCGCGCCGAGGATTCGGCTCGTCGCCGAGGACGGCAGCTACCTCGAGATCGGCAACGG
CATCACGCTCGGCACGAACGGCGACATCAAGCTGCTGTCGGCGTCGCACCAGTGGGGCGGGCCGTCGACGGCGCAGGCGG
CGAAGACCGCGTTCGACAACCAGCCGACGGATCAGCGTTTCAAGCTGCACTATCCGGGCGAGGACGGCGATTTGCCGGCT
GCGGCGAACAAGCCATTCCGGATCACGCTGAACGACGGGCGCGTCATCGAGGGCAAGACCGATGCGAGCGGCCTGACGGA
TCTGGTCAAGGACGACGCGATGCGTATCGCGAAGATCGACTATCTGAAACCGAAGCTTTGA

Upstream 100 bases:

>100_bases
TCAGCGTTGATAAAATCTACGCGCCGTGGGGAGGGCATCATTTACATCGAGAATCAATACTCCTCGGATTCGAATCCAAG
CAGAAACCTGAGAGTCTGCC

Downstream 100 bases:

>100_bases
ACCCGGGCGAACGATGAACGGTATCAACGATCAGTGTTTCACCGCCGCCCACGGGGCGGGCGTGACGATGGCGAATCGGC
CGGGCGACCGGCCCGTGCCG

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VgrG Protein; VGR-Like Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Rhs-Family Protein; Replication/Virulence Associated Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Rhs Protein; Rhs Element Vgr-Related Protein; Vgr Protein; VgrG Family T6SS G

Number of amino acids: Translated: 926; Mature: 925

Protein sequence:

>926_residues
MTNLNDTLRNFASGAVDWNKRPVALHFGAAQGALGHLLALQHASVQEGLMTGIGGRLTCVSTRRDIPPGVFLGMPVSIRL
ITDRGQPHMVNAIISDVQIGQSDGELCVYQLTVCDALSLMDKRTNSRVFRKRSVIDVLATLFNEWQQRSPALARAFEFDL
SGLRADRYPPRELTRQVNESDAHFVRRLLRREGITVFAKAGPAKGEQPLQGDATVHTLVCCDEPMSLPQAPAGTVRLHPR
DAGTEQRDTVTLFALRRQLVPGKAGRPSWDYKKARIDESSVASSLDQGEAGNDLAKLLTDIAIDIPHAGDSWSDHERLTR
ARMLAHEFEAERYDGVSSVRDLAVGAWITLTGDPDWDRQLADKRQFVITSIDHDIWNNLPKGLNDRVHALFAASRNLVNA
PGALPAALANDADTRYENTFTCVRRGVPLAPAYDPQADLPPVHLLTGTIVGAEGEEVFCDENGRVRVRVHGLDPADHAHA
QGAGTNDNAGDSAPIRVASSLAGAHFGASFLPRVGMEVLLGCLGGDPDRLVIIGVLGNGANPPATFSHAGGLPGNRYLSG
IKTKEIKGQRYNQLRLDDTPNQISAQLASEHAHSQLNLGYLTQPRENGHGNDRGEGAELRTDAAAALRAAQGILLTTYAR
TQASGGQLDRDELIRLLGECSELFKALGDYAGQHGGQAADTAGQHAVAAAFRNWTPGAGGADAPPDGGDRALMAFGAQAG
SVNVTPKTHVTYAGENIDQVAQQHLQLMSGQRLNATAGQGMQLFARGAGVQAVAGEGPMLLQAQADTLTANAQKGVKITT
NEHEVFVSAPRIRLVAEDGSYLEIGNGITLGTNGDIKLLSASHQWGGPSTAQAAKTAFDNQPTDQRFKLHYPGEDGDLPA
AANKPFRITLNDGRVIEGKTDASGLTDLVKDDAMRIAKIDYLKPKL

Sequences:

>Translated_926_residues
MTNLNDTLRNFASGAVDWNKRPVALHFGAAQGALGHLLALQHASVQEGLMTGIGGRLTCVSTRRDIPPGVFLGMPVSIRL
ITDRGQPHMVNAIISDVQIGQSDGELCVYQLTVCDALSLMDKRTNSRVFRKRSVIDVLATLFNEWQQRSPALARAFEFDL
SGLRADRYPPRELTRQVNESDAHFVRRLLRREGITVFAKAGPAKGEQPLQGDATVHTLVCCDEPMSLPQAPAGTVRLHPR
DAGTEQRDTVTLFALRRQLVPGKAGRPSWDYKKARIDESSVASSLDQGEAGNDLAKLLTDIAIDIPHAGDSWSDHERLTR
ARMLAHEFEAERYDGVSSVRDLAVGAWITLTGDPDWDRQLADKRQFVITSIDHDIWNNLPKGLNDRVHALFAASRNLVNA
PGALPAALANDADTRYENTFTCVRRGVPLAPAYDPQADLPPVHLLTGTIVGAEGEEVFCDENGRVRVRVHGLDPADHAHA
QGAGTNDNAGDSAPIRVASSLAGAHFGASFLPRVGMEVLLGCLGGDPDRLVIIGVLGNGANPPATFSHAGGLPGNRYLSG
IKTKEIKGQRYNQLRLDDTPNQISAQLASEHAHSQLNLGYLTQPRENGHGNDRGEGAELRTDAAAALRAAQGILLTTYAR
TQASGGQLDRDELIRLLGECSELFKALGDYAGQHGGQAADTAGQHAVAAAFRNWTPGAGGADAPPDGGDRALMAFGAQAG
SVNVTPKTHVTYAGENIDQVAQQHLQLMSGQRLNATAGQGMQLFARGAGVQAVAGEGPMLLQAQADTLTANAQKGVKITT
NEHEVFVSAPRIRLVAEDGSYLEIGNGITLGTNGDIKLLSASHQWGGPSTAQAAKTAFDNQPTDQRFKLHYPGEDGDLPA
AANKPFRITLNDGRVIEGKTDASGLTDLVKDDAMRIAKIDYLKPKL
>Mature_925_residues
TNLNDTLRNFASGAVDWNKRPVALHFGAAQGALGHLLALQHASVQEGLMTGIGGRLTCVSTRRDIPPGVFLGMPVSIRLI
TDRGQPHMVNAIISDVQIGQSDGELCVYQLTVCDALSLMDKRTNSRVFRKRSVIDVLATLFNEWQQRSPALARAFEFDLS
GLRADRYPPRELTRQVNESDAHFVRRLLRREGITVFAKAGPAKGEQPLQGDATVHTLVCCDEPMSLPQAPAGTVRLHPRD
AGTEQRDTVTLFALRRQLVPGKAGRPSWDYKKARIDESSVASSLDQGEAGNDLAKLLTDIAIDIPHAGDSWSDHERLTRA
RMLAHEFEAERYDGVSSVRDLAVGAWITLTGDPDWDRQLADKRQFVITSIDHDIWNNLPKGLNDRVHALFAASRNLVNAP
GALPAALANDADTRYENTFTCVRRGVPLAPAYDPQADLPPVHLLTGTIVGAEGEEVFCDENGRVRVRVHGLDPADHAHAQ
GAGTNDNAGDSAPIRVASSLAGAHFGASFLPRVGMEVLLGCLGGDPDRLVIIGVLGNGANPPATFSHAGGLPGNRYLSGI
KTKEIKGQRYNQLRLDDTPNQISAQLASEHAHSQLNLGYLTQPRENGHGNDRGEGAELRTDAAAALRAAQGILLTTYART
QASGGQLDRDELIRLLGECSELFKALGDYAGQHGGQAADTAGQHAVAAAFRNWTPGAGGADAPPDGGDRALMAFGAQAGS
VNVTPKTHVTYAGENIDQVAQQHLQLMSGQRLNATAGQGMQLFARGAGVQAVAGEGPMLLQAQADTLTANAQKGVKITTN
EHEVFVSAPRIRLVAEDGSYLEIGNGITLGTNGDIKLLSASHQWGGPSTAQAAKTAFDNQPTDQRFKLHYPGEDGDLPAA
ANKPFRITLNDGRVIEGKTDASGLTDLVKDDAMRIAKIDYLKPKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99156; Mature: 99025

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLNDTLRNFASGAVDWNKRPVALHFGAAQGALGHLLALQHASVQEGLMTGIGGRLTCV
CCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
STRRDIPPGVFLGMPVSIRLITDRGQPHMVNAIISDVQIGQSDGELCVYQLTVCDALSLM
ECCCCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH
DKRTNSRVFRKRSVIDVLATLFNEWQQRSPALARAFEFDLSGLRADRYPPRELTRQVNES
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
DAHFVRRLLRREGITVFAKAGPAKGEQPLQGDATVHTLVCCDEPMSLPQAPAGTVRLHPR
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCC
DAGTEQRDTVTLFALRRQLVPGKAGRPSWDYKKARIDESSVASSLDQGEAGNDLAKLLTD
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHH
IAIDIPHAGDSWSDHERLTRARMLAHEFEAERYDGVSSVRDLAVGAWITLTGDPDWDRQL
HEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCHHHHH
ADKRQFVITSIDHDIWNNLPKGLNDRVHALFAASRNLVNAPGALPAALANDADTRYENTF
HCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHH
TCVRRGVPLAPAYDPQADLPPVHLLTGTIVGAEGEEVFCDENGRVRVRVHGLDPADHAHA
HHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCC
QGAGTNDNAGDSAPIRVASSLAGAHFGASFLPRVGMEVLLGCLGGDPDRLVIIGVLGNGA
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
NPPATFSHAGGLPGNRYLSGIKTKEIKGQRYNQLRLDDTPNQISAQLASEHAHSQLNLGY
CCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCE
LTQPRENGHGNDRGEGAELRTDAAAALRAAQGILLTTYARTQASGGQLDRDELIRLLGEC
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
SELFKALGDYAGQHGGQAADTAGQHAVAAAFRNWTPGAGGADAPPDGGDRALMAFGAQAG
HHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC
SVNVTPKTHVTYAGENIDQVAQQHLQLMSGQRLNATAGQGMQLFARGAGVQAVAGEGPML
EEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEECCCCCEE
LQAQADTLTANAQKGVKITTNEHEVFVSAPRIRLVAEDGSYLEIGNGITLGTNGDIKLLS
EEECCCEEECCCCCCEEEECCCCEEEEECCEEEEEECCCCEEEECCCEEECCCCCEEEEE
ASHQWGGPSTAQAAKTAFDNQPTDQRFKLHYPGEDGDLPAAANKPFRITLNDGRVIEGKT
CCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEECCC
DASGLTDLVKDDAMRIAKIDYLKPKL
CCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TNLNDTLRNFASGAVDWNKRPVALHFGAAQGALGHLLALQHASVQEGLMTGIGGRLTCV
CCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
STRRDIPPGVFLGMPVSIRLITDRGQPHMVNAIISDVQIGQSDGELCVYQLTVCDALSLM
ECCCCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH
DKRTNSRVFRKRSVIDVLATLFNEWQQRSPALARAFEFDLSGLRADRYPPRELTRQVNES
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
DAHFVRRLLRREGITVFAKAGPAKGEQPLQGDATVHTLVCCDEPMSLPQAPAGTVRLHPR
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCC
DAGTEQRDTVTLFALRRQLVPGKAGRPSWDYKKARIDESSVASSLDQGEAGNDLAKLLTD
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHH
IAIDIPHAGDSWSDHERLTRARMLAHEFEAERYDGVSSVRDLAVGAWITLTGDPDWDRQL
HEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCHHHHH
ADKRQFVITSIDHDIWNNLPKGLNDRVHALFAASRNLVNAPGALPAALANDADTRYENTF
HCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHH
TCVRRGVPLAPAYDPQADLPPVHLLTGTIVGAEGEEVFCDENGRVRVRVHGLDPADHAHA
HHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCC
QGAGTNDNAGDSAPIRVASSLAGAHFGASFLPRVGMEVLLGCLGGDPDRLVIIGVLGNGA
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
NPPATFSHAGGLPGNRYLSGIKTKEIKGQRYNQLRLDDTPNQISAQLASEHAHSQLNLGY
CCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCE
LTQPRENGHGNDRGEGAELRTDAAAALRAAQGILLTTYARTQASGGQLDRDELIRLLGEC
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
SELFKALGDYAGQHGGQAADTAGQHAVAAAFRNWTPGAGGADAPPDGGDRALMAFGAQAG
HHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC
SVNVTPKTHVTYAGENIDQVAQQHLQLMSGQRLNATAGQGMQLFARGAGVQAVAGEGPML
EEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEECCCCCEE
LQAQADTLTANAQKGVKITTNEHEVFVSAPRIRLVAEDGSYLEIGNGITLGTNGDIKLLS
EEECCCEEECCCCCCEEEECCCCEEEEECCEEEEEECCCCEEEECCCEEECCCCCEEEEE
ASHQWGGPSTAQAAKTAFDNQPTDQRFKLHYPGEDGDLPAAANKPFRITLNDGRVIEGKT
CCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEEECCC
DASGLTDLVKDDAMRIAKIDYLKPKL
CCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA