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The map label for this gene is oprB [H]

Identifier: 83718616

GI number: 83718616

Start: 299336

End: 300880

Strand: Reverse

Name: oprB [H]

Synonym: BTH_I0267

Alternate gene names: 83718616

Gene position: 300880-299336 (Counterclockwise)

Preceding gene: 83721189

Following gene: 83719518

Centisome position: 7.9

GC content: 69.77

Gene sequence:

>1545_bases
ATGAAGAAAACCGTTCATCACATGCTCGTCACATCCGGCGTCGCCTCCGGCCTGCCGCTGCTGCTGTCGCTCGGCGTCCC
GCATGCCGCACTCGCGCAAGCCGCGTCAGCGAGCGCCGCCGCCTCCGCGTCCGAAAGCGCCGCGCAGGCATCGCCCGCTG
CCGCCGCCACCTCCGCGGCGCTCGCCATCGACGGCGTGCAGACGCGATCCGCCGCGCCGGCCCCCGATGCCGCCGCCACG
CCCGCTCCCACCGGCTTCTGGGAACGCTCGAACCTGTTCGGCGACATGGGCGGCCTGCGCAGCAAGCTCGGCGATCACGG
GATCACGCTGAACCTGCAGGAAACGAGCGAATACCTGCGCAACCTGTCGGGCGGCACGAGCCGCGGCGGCGCATACGGCG
GCCTCACGCAATTCGGCTTCAGCGTCGACACCGAAAAGGCCATCGGGCTGCCCGGCGGCACGTTCAACGTGTCGGGCCTG
CAGATTCACGGCACGAGCCTCACGTCGCGCAACCTGCAACTGCTGCAGACGGCGAGCGGCATCGAGGCAGAGGGGACGAC
GCGCCTCTGGGAACTTTGGTATCAGCAGTCGTTCGCGAACGGCCGCGCCGACGTGAAGATCGGCCAGCAAAGCCTCGATC
AGGAATTCATGGTGAGCCAGTACGCGAGCACGTTCATCAACGCGACGTTCGGCTGGCCCGTGCTGCCGGCCGTCGACATG
CCGGCGGGCGGCCCCGCGTATCCGCTGTCGTCGCTCGGCGTGCGGCTGCGCGCGAAGCCCTCCGATGCGTGGACGGTGAT
GGCGGGCGTGTTCGACGGCAATCCGGCGGGCGGCGTCGGCGACGCGCAGCAGCTCAATCGCCACGGCACGAACTTCAACC
TGCGCAACGGCGCGCTCTTCATCGGCGAGCTCCAGTACGCGCTGAACGCGCCGCCCGCCGACCCGAAGGCGCCGCAGCCG
GCGGGCCTGCCGGGCATGTACAAGCTCGGCGTCTGGTACAACTCGGAGCGTTTCGCCGATCCGCGCTACGACACGAACGG
CGTCGCGCTCGCCGATCCGGCAAGCAACGGCATCGCGGCGACGCATCGCGGCAACTACGGCTTCTACGCGGTCGCGGACC
AGATGGTATGGCGCCCGGGCGCGGACAGCCCGCGCTCGCTGAACGTGTTCGCACGCGTGATGGGCGCACCCGGCGATCGC
AACACGGTCGACTTCACGCTGAATGCCGGCGTCACGCTGAGGGCGCCGTTCGCCGGACGCGACAACGACACGGCGGGGCT
CGCCGTCAGCTACGCGAAAGTCGGCTCGCACGCGCGCGGCGCCGACGGCGACGCCGGCGTGTTCCAGACGCCCGGCTATC
CGGTGCGCCGCGCGGAAACGCTGCTCGAGGCGACCTACCAGTATCAGATGACGCCGTGGTGGCAATTGCAGGCGGACTTC
CAGTACGCATTCCGGCCGGGCGGCGGCATCCCGAACCCGAACGAGCCGGGCACGCGAATCGGCAATGAAGCGATCGTCGG
CGTACGCACGACGATCGCGTTCTGA

Upstream 100 bases:

>100_bases
AAGCACCCGGCAAGCCCGGCGGTTCGCCGTGTCCGCCGGGCAACCTCAAGCGGCGAGCGGGCGATATTCTCGCCCGCATT
CATCCAAGCAACGATTCGTC

Downstream 100 bases:

>100_bases
CCCGTTTCGCTTTCCTCATCTGTCACACCTTTCATTTCCTGCGCCGCGCGCGCCGTTCACGGCGGCGCCGCGCGCCCGCC
GCCCGCGCGCCGTCGAATCG

Product: carbohydrate porin

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MKKTVHHMLVTSGVASGLPLLLSLGVPHAALAQAASASAAASASESAAQASPAAAATSAALAIDGVQTRSAAPAPDAAAT
PAPTGFWERSNLFGDMGGLRSKLGDHGITLNLQETSEYLRNLSGGTSRGGAYGGLTQFGFSVDTEKAIGLPGGTFNVSGL
QIHGTSLTSRNLQLLQTASGIEAEGTTRLWELWYQQSFANGRADVKIGQQSLDQEFMVSQYASTFINATFGWPVLPAVDM
PAGGPAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALFIGELQYALNAPPADPKAPQP
AGLPGMYKLGVWYNSERFADPRYDTNGVALADPASNGIAATHRGNYGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDR
NTVDFTLNAGVTLRAPFAGRDNDTAGLAVSYAKVGSHARGADGDAGVFQTPGYPVRRAETLLEATYQYQMTPWWQLQADF
QYAFRPGGGIPNPNEPGTRIGNEAIVGVRTTIAF

Sequences:

>Translated_514_residues
MKKTVHHMLVTSGVASGLPLLLSLGVPHAALAQAASASAAASASESAAQASPAAAATSAALAIDGVQTRSAAPAPDAAAT
PAPTGFWERSNLFGDMGGLRSKLGDHGITLNLQETSEYLRNLSGGTSRGGAYGGLTQFGFSVDTEKAIGLPGGTFNVSGL
QIHGTSLTSRNLQLLQTASGIEAEGTTRLWELWYQQSFANGRADVKIGQQSLDQEFMVSQYASTFINATFGWPVLPAVDM
PAGGPAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALFIGELQYALNAPPADPKAPQP
AGLPGMYKLGVWYNSERFADPRYDTNGVALADPASNGIAATHRGNYGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDR
NTVDFTLNAGVTLRAPFAGRDNDTAGLAVSYAKVGSHARGADGDAGVFQTPGYPVRRAETLLEATYQYQMTPWWQLQADF
QYAFRPGGGIPNPNEPGTRIGNEAIVGVRTTIAF
>Mature_514_residues
MKKTVHHMLVTSGVASGLPLLLSLGVPHAALAQAASASAAASASESAAQASPAAAATSAALAIDGVQTRSAAPAPDAAAT
PAPTGFWERSNLFGDMGGLRSKLGDHGITLNLQETSEYLRNLSGGTSRGGAYGGLTQFGFSVDTEKAIGLPGGTFNVSGL
QIHGTSLTSRNLQLLQTASGIEAEGTTRLWELWYQQSFANGRADVKIGQQSLDQEFMVSQYASTFINATFGWPVLPAVDM
PAGGPAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALFIGELQYALNAPPADPKAPQP
AGLPGMYKLGVWYNSERFADPRYDTNGVALADPASNGIAATHRGNYGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDR
NTVDFTLNAGVTLRAPFAGRDNDTAGLAVSYAKVGSHARGADGDAGVFQTPGYPVRRAETLLEATYQYQMTPWWQLQADF
QYAFRPGGGIPNPNEPGTRIGNEAIVGVRTTIAF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 53781; Mature: 53781

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVHHMLVTSGVASGLPLLLSLGVPHAALAQAASASAAASASESAAQASPAAAATSAA
CCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHE
LAIDGVQTRSAAPAPDAAATPAPTGFWERSNLFGDMGGLRSKLGDHGITLNLQETSEYLR
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHH
NLSGGTSRGGAYGGLTQFGFSVDTEKAIGLPGGTFNVSGLQIHGTSLTSRNLQLLQTASG
HCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECEEEEECCCCCCCCEEEEECCCC
IEAEGTTRLWELWYQQSFANGRADVKIGQQSLDQEFMVSQYASTFINATFGWPVLPAVDM
CCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAGGPAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALF
CCCCCCCCHHHCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCEEECCCEEE
IGELQYALNAPPADPKAPQPAGLPGMYKLGVWYNSERFADPRYDTNGVALADPASNGIAA
EEEEHEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEE
THRGNYGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDRNTVDFTLNAGVTLRAPFAGR
EECCCCCEEEEECHHEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCEEEECCCCCC
DNDTAGLAVSYAKVGSHARGADGDAGVFQTPGYPVRRAETLLEATYQYQMTPWWQLQADF
CCCCCCEEEEHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHEECCCEEEEEECE
QYAFRPGGGIPNPNEPGTRIGNEAIVGVRTTIAF
EEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKTVHHMLVTSGVASGLPLLLSLGVPHAALAQAASASAAASASESAAQASPAAAATSAA
CCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHE
LAIDGVQTRSAAPAPDAAATPAPTGFWERSNLFGDMGGLRSKLGDHGITLNLQETSEYLR
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHH
NLSGGTSRGGAYGGLTQFGFSVDTEKAIGLPGGTFNVSGLQIHGTSLTSRNLQLLQTASG
HCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECEEEEECCCCCCCCEEEEECCCC
IEAEGTTRLWELWYQQSFANGRADVKIGQQSLDQEFMVSQYASTFINATFGWPVLPAVDM
CCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAGGPAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALF
CCCCCCCCHHHCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCEEECCCEEE
IGELQYALNAPPADPKAPQPAGLPGMYKLGVWYNSERFADPRYDTNGVALADPASNGIAA
EEEEHEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEE
THRGNYGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDRNTVDFTLNAGVTLRAPFAGR
EECCCCCEEEEECHHEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCEEEECCCCCC
DNDTAGLAVSYAKVGSHARGADGDAGVFQTPGYPVRRAETLLEATYQYQMTPWWQLQADF
CCCCCCEEEEHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHEECCCEEEEEECE
QYAFRPGGGIPNPNEPGTRIGNEAIVGVRTTIAF
EEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]