| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is outE [H]
Identifier: 83718589
GI number: 83718589
Start: 10582
End: 12075
Strand: Direct
Name: outE [H]
Synonym: BTH_I0008
Alternate gene names: 83718589
Gene position: 10582-12075 (Clockwise)
Preceding gene: 83720377
Following gene: 83721515
Centisome position: 0.28
GC content: 69.48
Gene sequence:
>1494_bases GTGACGCAGGCGCTCGCGCAAGGCGCTCAGGATCAGCCTGCCGCGAGCGCGCCGTCGCCGCTCGCCGCGCGGCTGTTGCC GTACGGCTTCGCGAAGGCCGGCCAGATCCTGATCGCGCATCAGCACGCGGACACGCTCGAAGTGTGGATCAGCGAGCGCA CGAGCTCGGCCGCGCTTGCCGAAGTCGCGCGCAACTTCGGCGCGATCTCGTTGCTGCGCCTGCCGGCCGACGAACTCGCG CAGGCGATCAACCACGCGTACGCGCGCCAGGACGGCAGCGCCGCGCAGATCGTCGGCGAGGTCGAGGGCGAAGTCGACCT GTCGCGGCTGATGCAGGACATTCCCGAAGTCGAGGACTTGCTCGAATCGGAAGACGACGCGCCGATCATCCGGATGATCA ACGCGCTCTTGACGCAAGCGGCGCGCGAGCAGGCGTCGGACATCCACATCGAGCCGTTCGAGAACGCATCGGTCGTGCGC TTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGGCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGATCAAGAT CATGGCGCAGCTCGACATCGCGGAGAAGCGCCTGCCGCAGGACGGCCGGATCACGCTGCGCGTGGGCGGGCGGCCCGTCG ACGTGCGGGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTGCGTCTGCTGGAGAAGGACGCGCAGCGGCTG AACCTCGAAGCGCTCGGCATGGGCCGCGACACGCTCGTGCAGTTCGACAAGCTGATCTCGCGCCCGCACGGCATCGTGCT CGTCACGGGGCCGACCGGCTCGGGCAAGACGACGACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGACCAACA TCATGACGGTCGAGGACCCGATCGAATACGACCTCTCCGGCATCGGCCAGACGCAGGTGAACGAGCGGATCGGGATGACG TTCGCGCGCGCGCTGCGCTCGATCCTGCGTCAGGACCCGGACATCATCATGATCGGCGAAATCCGCGATCTCGAGACCGC GCAGATCGCGGTGCAGGCGTCGCTGACGGGCCACCTGGTGCTCGCGACGCTGCACACGAACGATGCGGCGTCGGCCGTCA CGCGTCTGACGGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGGCTCGTGCGC CAGCTCTGCCCGGTGTGCAAGGAGGAGCGGCACGAGGACGGCCGCGCGGTCTGGCATCCGGTCGGCTGCGACAAGTGCGG GCATTCGGGTTACACGGGGCGCCGCGGCGTTTATGAGCTGCTCGTCATCGACGATTCGATCCGCTCGCTGATCCACCGCA ACGCAGCCGACGCGGAGATTCTCGCGACGGGCCGCGCGAACGGGATGCGCACGCTGCGCGACGATGCCGAACGCTGGCTC GCGGCGGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCGTAG
Upstream 100 bases:
>100_bases ACATCGACAAGATGCGGCGCCAGCAGCTCGTTGCGCCCGCGCCCGCCAGCGCGCCCGCGGCGGCGAGCGACGCCGGCGCC GCATCGTCGGGAGCCCGTCC
Downstream 100 bases:
>100_bases CGTCATGCCGGCCTTCCGTTTCGAAGCGATCGACGCGTCGGGGCGCGCGCAAAAGGGCGTCATCGAGGCCGACAGCGCAC GCAACGCGCGCGGCCAGCTG
Product: general secretion pathway protein E
Products: NA
Alternate protein names: Pectic enzymes secretion protein outE; Type II traffic warden ATPase [H]
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MTQALAQGAQDQPAASAPSPLAARLLPYGFAKAGQILIAHQHADTLEVWISERTSSAALAEVARNFGAISLLRLPADELA QAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVR FRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRL NLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGMT FARALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVR QLCPVCKEERHEDGRAVWHPVGCDKCGHSGYTGRRGVYELLVIDDSIRSLIHRNAADAEILATGRANGMRTLRDDAERWL AAGATSLEEVLRVTGGA
Sequences:
>Translated_497_residues MTQALAQGAQDQPAASAPSPLAARLLPYGFAKAGQILIAHQHADTLEVWISERTSSAALAEVARNFGAISLLRLPADELA QAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVR FRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRL NLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGMT FARALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVR QLCPVCKEERHEDGRAVWHPVGCDKCGHSGYTGRRGVYELLVIDDSIRSLIHRNAADAEILATGRANGMRTLRDDAERWL AAGATSLEEVLRVTGGA >Mature_496_residues TQALAQGAQDQPAASAPSPLAARLLPYGFAKAGQILIAHQHADTLEVWISERTSSAALAEVARNFGAISLLRLPADELAQ AINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVRF RVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRLN LEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGMTF ARALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVRQ LCPVCKEERHEDGRAVWHPVGCDKCGHSGYTGRRGVYELLVIDDSIRSLIHRNAADAEILATGRANGMRTLRDDAERWLA AGATSLEEVLRVTGGA
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of pectate lyases and cellulases across the outer membrane [H]
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP E family [H]
Homologues:
Organism=Escherichia coli, GI1789723, Length=481, Percent_Identity=48.8565488565489, Blast_Score=449, Evalue=1e-127, Organism=Escherichia coli, GI1786296, Length=440, Percent_Identity=42.9545454545455, Blast_Score=332, Evalue=2e-92, Organism=Escherichia coli, GI87082188, Length=282, Percent_Identity=36.1702127659575, Blast_Score=122, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013369 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E [H]
EC number: NA
Molecular weight: Translated: 53886; Mature: 53755
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00662 T2SP_E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQALAQGAQDQPAASAPSPLAARLLPYGFAKAGQILIAHQHADTLEVWISERTSSAALA CCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEHHHHHCCCCHHHHH EVARNFGAISLLRLPADELAQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDL HHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHHHCHHHHHH LESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVRFRVDGTLRDVVRPKKALHGA HCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHH LISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRL HHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHC NLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDP CHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCEEEECCC IEYDLSGIGQTQVNERIGMTFARALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLV CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEECCCEEE LATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVRQLCPVCKEERHEDGRAVWHP EEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC VGCDKCGHSGYTGRRGVYELLVIDDSIRSLIHRNAADAEILATGRANGMRTLRDDAERWL CCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH AAGATSLEEVLRVTGGA HHCHHHHHHHHHHCCCC >Mature Secondary Structure TQALAQGAQDQPAASAPSPLAARLLPYGFAKAGQILIAHQHADTLEVWISERTSSAALA CCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEHHHHHCCCCHHHHH EVARNFGAISLLRLPADELAQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDL HHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHHHCHHHHHH LESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVRFRVDGTLRDVVRPKKALHGA HCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHH LISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRL HHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHC NLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDP CHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCEEEECCC IEYDLSGIGQTQVNERIGMTFARALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLV CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEECCCEEE LATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVRQLCPVCKEERHEDGRAVWHP EEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC VGCDKCGHSGYTGRRGVYELLVIDDSIRSLIHRNAADAEILATGRANGMRTLRDDAERWL CCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH AAGATSLEEVLRVTGGA HHCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1429461 [H]