| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ybhP [H]
Identifier: 83718570
GI number: 83718570
Start: 246319
End: 247011
Strand: Reverse
Name: ybhP [H]
Synonym: BTH_I0213
Alternate gene names: 83718570
Gene position: 247011-246319 (Counterclockwise)
Preceding gene: 83719931
Following gene: 83719062
Centisome position: 6.48
GC content: 70.85
Gene sequence:
>693_bases ATGCGCAACTGGGTGGAATCGACGCACGCGGACATCTATTTCCTGCAGGAAGCGATGGCGCGGCGCATGCCGCGTCCGGT GCTCGCGTCCGGCTTCGGCACGCCGATGACGGAGCCTGCCGACGACATCTGGCACTGCCAAGCAACCGAGATCGCGCACG CGCTCGACTGGCAGATCGCGCTCGGGCCCAACGTGTTCAAGCCGTCGTGGCGGCACGGCAACGCGATCCTCTCGCCGCAT CCGCTCGATCTCGGCGGCCGCTGGGACATCTCCGCGCACCGCTTCGAGCGCCGCGGCCTGCTCGTCGCGCGCGCGACGCT CGGGGGCGGCGCGCCCGTGACGCTGCTGTGCGCGCACCTCGCGCTCACACGCGCCGCTCGGCTGCGGCAAATGCACTGGA TCGCGCACTGGATCGAGCGCAACGCGGGCGCGGGGCCGCTCGTGCTCGCGGGCGACTTCAACGACTGGCGCAACGATTCG ATCCCGCTGTTCGGCGAGATCGGCCTGTCGGAAGTGGCGACGCTGCTCGGCGAGTCGGGCCGCACGTTTCCGGCGTTCTC GCCCGCGCTCGCGCTCGACAAGATGTTCGTGCGCGGGATGACGCCGCTCGAATGGCGCGCGCCCGGCGACGAGACCGCAT GGCTGTCCGACCATCTGCCGTACGTCGCGCGGCTGCGGCTGGATACGCCGTGA
Upstream 100 bases:
>100_bases GCCGCTCGCCGAGCCGCTGCCCGTCGCCAACGAGATCACCGCGGTCAGCTGGAATCTGCACAAGGGGCGCTCGCCGCTCG GCTTCACCGCGTGGAACGCG
Downstream 100 bases:
>100_bases GCGCGGCGGCGCGAACCGGCGCCGGCGGCCGGCCGCTCGGACGACGCCGGCGCGCGCCTGCCGCCGCCCGCGATGCGCGA TTACCTGCGCGCGTACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MRNWVESTHADIYFLQEAMARRMPRPVLASGFGTPMTEPADDIWHCQATEIAHALDWQIALGPNVFKPSWRHGNAILSPH PLDLGGRWDISAHRFERRGLLVARATLGGGAPVTLLCAHLALTRAARLRQMHWIAHWIERNAGAGPLVLAGDFNDWRNDS IPLFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPGDETAWLSDHLPYVARLRLDTP
Sequences:
>Translated_230_residues MRNWVESTHADIYFLQEAMARRMPRPVLASGFGTPMTEPADDIWHCQATEIAHALDWQIALGPNVFKPSWRHGNAILSPH PLDLGGRWDISAHRFERRGLLVARATLGGGAPVTLLCAHLALTRAARLRQMHWIAHWIERNAGAGPLVLAGDFNDWRNDS IPLFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPGDETAWLSDHLPYVARLRLDTP >Mature_230_residues MRNWVESTHADIYFLQEAMARRMPRPVLASGFGTPMTEPADDIWHCQATEIAHALDWQIALGPNVFKPSWRHGNAILSPH PLDLGGRWDISAHRFERRGLLVARATLGGGAPVTLLCAHLALTRAARLRQMHWIAHWIERNAGAGPLVLAGDFNDWRNDS IPLFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPGDETAWLSDHLPYVARLRLDTP
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787008, Length=240, Percent_Identity=32.9166666666667, Blast_Score=100, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005135 [H]
Pfam domain/function: PF03372 Exo_endo_phos [H]
EC number: NA
Molecular weight: Translated: 25594; Mature: 25594
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNWVESTHADIYFLQEAMARRMPRPVLASGFGTPMTEPADDIWHCQATEIAHALDWQIA CCCCHHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCEEEE LGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLGGGAPVTLLCAHL ECCCCCCCCCCCCCEECCCCCCCCCCEECCHHHHHHHCCEEEEEECCCCCCHHHHHHHHH ALTRAARLRQMHWIAHWIERNAGAGPLVLAGDFNDWRNDSIPLFGEIGLSEVATLLGESG HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEECCCHHHHHHHHCCCC RTFPAFSPALALDKMFVRGMTPLEWRAPGDETAWLSDHLPYVARLRLDTP CCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCEEEEEEECCC >Mature Secondary Structure MRNWVESTHADIYFLQEAMARRMPRPVLASGFGTPMTEPADDIWHCQATEIAHALDWQIA CCCCHHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCEEEE LGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLGGGAPVTLLCAHL ECCCCCCCCCCCCCEECCCCCCCCCCEECCHHHHHHHCCEEEEEECCCCCCHHHHHHHHH ALTRAARLRQMHWIAHWIERNAGAGPLVLAGDFNDWRNDSIPLFGEIGLSEVATLLGESG HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEECCCHHHHHHHHCCCC RTFPAFSPALALDKMFVRGMTPLEWRAPGDETAWLSDHLPYVARLRLDTP CCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]