| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yvlD [H]
Identifier: 83718543
GI number: 83718543
Start: 3608305
End: 3608658
Strand: Reverse
Name: yvlD [H]
Synonym: BTH_I3164
Alternate gene names: 83718543
Gene position: 3608658-3608305 (Counterclockwise)
Preceding gene: 83719843
Following gene: 83721420
Centisome position: 94.74
GC content: 60.45
Gene sequence:
>354_bases ATGACCGTCATCCTGACCTGGATCATCAACGCGCTCGCGCTCTTGATCATCACGTACCTCGTGCCGTCGATCCACATCAA GAGCTTCGGCACGGCGCTCATCGTCGCGGTCGTGCTGGGCCTCATCAACGCGGTGATCCGACCGATCCTGATCCTGCTCA CGCTGCCCGTGACGATCGTCACGCTCGGCCTGTTCATCCTCGTCGTGAACGCGCTGTGCTTCTGGTTCGCGTCGTCGCTG TTGAAAGGGTTCGAGGTGTCGGGATTCTGGTCCGCGTTCTTCGGTTCGATCCTGTACAGCATCGTGTCGTGGCTGCTGTC CGCCCTGATCTTCGGTCAGCGCAACATCGGCTGA
Upstream 100 bases:
>100_bases GGCGCGCGGGCGGCAAAGCAAGCCGCCCGCCGCGCCGCGCGTTCTCATCTTCCGGGGCGGCCGCGCCCGGCCGGATCGTC AACCGCTGAAGGAGCAACCC
Downstream 100 bases:
>100_bases CGGGTGATACCTGAATCATGAACCCGATCGAACTTTCCTTTGAATTCTTTCCGCCGAAGACGGCGGAAGGCGTCGACAAG CTGCGCGCGACGCGCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTVILTWIINALALLIITYLVPSIHIKSFGTALIVAVVLGLINAVIRPILILLTLPVTIVTLGLFILVVNALCFWFASSL LKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRNIG
Sequences:
>Translated_117_residues MTVILTWIINALALLIITYLVPSIHIKSFGTALIVAVVLGLINAVIRPILILLTLPVTIVTLGLFILVVNALCFWFASSL LKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRNIG >Mature_116_residues TVILTWIINALALLIITYLVPSIHIKSFGTALIVAVVLGLINAVIRPILILLTLPVTIVTLGLFILVVNALCFWFASSLL KGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRNIG
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007165 [H]
Pfam domain/function: PF04020 DUF360 [H]
EC number: NA
Molecular weight: Translated: 12750; Mature: 12619
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVILTWIINALALLIITYLVPSIHIKSFGTALIVAVVLGLINAVIRPILILLTLPVTIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGLFILVVNALCFWFASSLLKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRNIG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVILTWIINALALLIITYLVPSIHIKSFGTALIVAVVLGLINAVIRPILILLTLPVTIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGLFILVVNALCFWFASSLLKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRNIG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]