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The map label for this gene is aidB [H]

Identifier: 83718514

GI number: 83718514

Start: 224979

End: 226658

Strand: Reverse

Name: aidB [H]

Synonym: BTH_I0193

Alternate gene names: 83718514

Gene position: 226658-224979 (Counterclockwise)

Preceding gene: 83720030

Following gene: 83721109

Centisome position: 5.95

GC content: 69.52

Gene sequence:

>1680_bases
ATGCAGCAGGACCTGATGACGGCGACGCACCGGGTGACGAACCAGGCGCCGCCGCTTTCCGATTACAACGCGTTTGAAAC
AGATGCCGCGCTCGTCGAGGCCGTTCAACGGTACGACGCGAGCTGGCGTCAAACGGCGCTCGCGCGCGACGGCGCCGCGC
TGACGACGCCCGATGTGCTCGCGCTCGCCGACCTCGCGAACCGGCACGCGCCCGAGCTCGCGACGCACAGCCCGCGCGGC
GAGCGGATCGATGCGCTCGAATTTCATCCGAGCTGGCACCAGTTGCTCGCGCTGCTGCGCGGCGAAGGGCTGCACGCGCT
GCCGTTCTCGGAGCCGCAGCCGGGCGCGATGGCCGCGCGCTGCGCCGGCTATTACCTGCATGCGCAGCTCGAATCCGGCT
CGCTCTGCCCGCTCACGATGACCTTCGCGAGCATCCCGGTGCTGCGGCACGAACCGGCCCTTTTTGCGACGCTGCGCGAC
AAGCTGTATTCGCGCGAGCACGACGCGCGCGACGTGCCGCTTTCGCAAAAGCGCTCGATGATGGTCGGCATGGGCATGAC
GGAAAAGCAAGGCGGCTCCGACGTGCGCAGCAACGAGACGCACGCGTCCCCGCTCGGCGCGCCCGGGCGCGGGCAAGCGT
ACCGGCTCGTCGGTCACAAATGGTTCTTCTCGGCGCCGCAATGCGACGCGCATCTCGTGCTCGCGCGCACGTCCGGGCAC
GCGGGCATCTCATGCTTCTACGTGCCGCGCTTTTCGCCCGACGGCAGCAAGAACGCGGTCCACGTGCAACGCCTGAAGGA
CAAGCTCGGCAATCGCTCGAACGCGAGCGGCGAAGTCGAATTCCTGAATGCGTACGGCGTGATGATCGGCGACGAAGGGC
GCGGCGTGCCGACGATCATCGAGATGGCGAACTACACGCGGCTCGACTGCGTGATCGGCAGCGCGGCGCTGATGCGCGCG
GCGCTCGTGCAGGCGATCCATCACGCGCGGCATCGCAGCGCGTTCGGCCGCCTGCTCGCCGATCAGCCGCTGATGCGCAA
CGTGCTCGCCGATCTGGCGCTCGAATCGGAAGCGGCGACCGCGCTCTTCATGCGGCTCGCGCACGCGTTCGAGGAAGAGG
CGAGCGCGCGCTCGCCGCAGGCGCGCGGCTGGCGGCGCATCGTCACGCCGGCCGCGAAGTTCTGGGTCTGCAAGCGCACG
CTCGAATTCACGGGCGAAGCGATGGAAGTATGGGGCGGCAACGGCTACGTCGAAACCGCGCCGATGGCGCGCTTCTATCG
CGAAGCCCCCGTCAATTCGATCTGGGAAGGCTCAGGCAACGTGATGTGCCTCGACGTGCTGCGCGCGATCGAGCGCGAGC
CCGACGCGGCCGCCGCGCTTCTCGACGAATGGCGCGACGCGGCGCGGCACAGCGCGCCGCTCGCCAGCGCGCTCGCGGAA
CTGACGCACCTGCTGTCGCTCGAACCCGAGCCGCGCGAAGCCTGCGCGCGGCGGATCGCACAACGCATCGCACTCGTCGC
GCAGGCCTCGCTGCTGCTGCGCGACGGACCACCCGCCGTCGCGCACGCGTTCGTCGCCACGCGCTTCGGTGAAACCAGCA
GCGAAACCGGACGCGTCTTCGGCACGCTGCCGGCCACCATCGATCACGCCGCGCTCATCGAGCGGGCGTTCCCGGCCTGA

Upstream 100 bases:

>100_bases
TCTAAACGTCGACGTGAACTAAATTTAAGATGAGTGGATTCGCCTCGCGCGGAGGACGCGGCCAATAGAAGCCGGGCCCC
GCGAAATGGGAGACAAAGGC

Downstream 100 bases:

>100_bases
ATGCCGGCCACACCCGTATCGCCAAGGAGACGCCATGAAGAACGATCTGCCCGGTTTAGCCACGCTCGACGCGCTGTTGC
GCGATCAGCGCGCCGCGTAT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MQQDLMTATHRVTNQAPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDVLALADLANRHAPELATHSPRG
ERIDALEFHPSWHQLLALLRGEGLHALPFSEPQPGAMAARCAGYYLHAQLESGSLCPLTMTFASIPVLRHEPALFATLRD
KLYSREHDARDVPLSQKRSMMVGMGMTEKQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGH
AGISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRLDCVIGSAALMRA
ALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAHAFEEEASARSPQARGWRRIVTPAAKFWVCKRT
LEFTGEAMEVWGGNGYVETAPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLASALAE
LTHLLSLEPEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSETGRVFGTLPATIDHAALIERAFPA

Sequences:

>Translated_559_residues
MQQDLMTATHRVTNQAPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDVLALADLANRHAPELATHSPRG
ERIDALEFHPSWHQLLALLRGEGLHALPFSEPQPGAMAARCAGYYLHAQLESGSLCPLTMTFASIPVLRHEPALFATLRD
KLYSREHDARDVPLSQKRSMMVGMGMTEKQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGH
AGISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRLDCVIGSAALMRA
ALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAHAFEEEASARSPQARGWRRIVTPAAKFWVCKRT
LEFTGEAMEVWGGNGYVETAPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLASALAE
LTHLLSLEPEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSETGRVFGTLPATIDHAALIERAFPA
>Mature_559_residues
MQQDLMTATHRVTNQAPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDVLALADLANRHAPELATHSPRG
ERIDALEFHPSWHQLLALLRGEGLHALPFSEPQPGAMAARCAGYYLHAQLESGSLCPLTMTFASIPVLRHEPALFATLRD
KLYSREHDARDVPLSQKRSMMVGMGMTEKQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGH
AGISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYTRLDCVIGSAALMRA
ALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATALFMRLAHAFEEEASARSPQARGWRRIVTPAAKFWVCKRT
LEFTGEAMEVWGGNGYVETAPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLASALAE
LTHLLSLEPEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSETGRVFGTLPATIDHAALIERAFPA

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=277, Percent_Identity=28.5198555956679, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI226958414, Length=277, Percent_Identity=28.5198555956679, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4501859, Length=320, Percent_Identity=26.5625, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI7656849, Length=274, Percent_Identity=27.3722627737226, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI4557233, Length=268, Percent_Identity=26.1194029850746, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI187960098, Length=280, Percent_Identity=24.2857142857143, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI4557231, Length=280, Percent_Identity=24.2857142857143, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI87082384, Length=533, Percent_Identity=47.2795497185741, Blast_Score=456, Evalue=1e-129,
Organism=Escherichia coli, GI87081958, Length=279, Percent_Identity=24.0143369175627, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI86563381, Length=495, Percent_Identity=28.0808080808081, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI86563383, Length=495, Percent_Identity=28.0808080808081, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17538396, Length=297, Percent_Identity=28.956228956229, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=276, Percent_Identity=26.4492753623188, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=275, Percent_Identity=25.8181818181818, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=273, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17505929, Length=287, Percent_Identity=29.616724738676, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355753, Length=280, Percent_Identity=25.3571428571429, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21356377, Length=275, Percent_Identity=25.8181818181818, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24646207, Length=289, Percent_Identity=23.1833910034602, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 60979; Mature: 60979

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQDLMTATHRVTNQAPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDVL
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHH
ALADLANRHAPELATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFSEPQPGAMAAR
HHHHHHHCCCCCHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCEECCCCCCCCCHHHHH
CAGYYLHAQLESGSLCPLTMTFASIPVLRHEPALFATLRDKLYSREHDARDVPLSQKRSM
HHCEEEEEEECCCCCCCEEHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCC
MVGMGMTEKQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCEEEEEEECCC
AGISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTII
CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCHHHH
EMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAAT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ALFMRLAHAFEEEASARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECC
PMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLASALAE
HHHHHHHHCCCCHHHCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
LTHLLSLEPEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSETGRVF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEE
GTLPATIDHAALIERAFPA
EECCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQDLMTATHRVTNQAPPLSDYNAFETDAALVEAVQRYDASWRQTALARDGAALTTPDVL
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHH
ALADLANRHAPELATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFSEPQPGAMAAR
HHHHHHHCCCCCHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCEECCCCCCCCCHHHHH
CAGYYLHAQLESGSLCPLTMTFASIPVLRHEPALFATLRDKLYSREHDARDVPLSQKRSM
HHCEEEEEEECCCCCCCEEHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCC
MVGMGMTEKQGGSDVRSNETHASPLGAPGRGQAYRLVGHKWFFSAPQCDAHLVLARTSGH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCEEEEEEECCC
AGISCFYVPRFSPDGSKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTII
CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCHHHH
EMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAAT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ALFMRLAHAFEEEASARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECC
PMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALLDEWRDAARHSAPLASALAE
HHHHHHHHCCCCHHHCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
LTHLLSLEPEPREACARRIAQRIALVAQASLLLRDGPPAVAHAFVATRFGETSSETGRVF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEE
GTLPATIDHAALIERAFPA
EECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]