| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yxxF [H]
Identifier: 83718485
GI number: 83718485
Start: 342781
End: 343701
Strand: Direct
Name: yxxF [H]
Synonym: BTH_I0310
Alternate gene names: 83718485
Gene position: 342781-343701 (Clockwise)
Preceding gene: 83721076
Following gene: 83719026
Centisome position: 9.0
GC content: 69.16
Gene sequence:
>921_bases ATGCACATGGCTTCGAGCTCGGTTTCGTACGACGCGCGCCGCGGCGCGCTCGAAATGGTGGTCGCGATGCTGATGTCCGG GACGATCGGCTGGCTCGTCGTGTCGTCGCGGCAGCATCTGATGAATGTCGTGTTTTTCCGCTGCCTGTTCGGCGGCGCGA CGATGCTGATCATTTGCGCGGCGCTCGGCTTGCTGCGCCGCGATCTGTTGACGAAGCGCGCGATCGCGCTCGCGCTGACC GGCAGCGTCGCGATCGTCGCGAACTGGGTGCTGCTGTTCGCCGCGTATTCGCGCGCGTCGATCTCGATGGCGACGGCCGT CTACAACACGCAGCCGTTCATGCTCGTTGCGCTCGGCGCGATCGTGTTCCGCGAGCGGCTCACCGCGTCGGCCGTCGCGT GGCTCGTGCTTGCTTTCGGCGGGCTCGCGCTCGTCGTGCGCGTCGAGCCCGCGGTGCTCGCGGTGTCCGGCGAGTATCTC TCGGGCGTCGCGCTCGCGCTCGGCGCGGCGTTCCTGTACGCGGTGTCGTCGATCATCACGAAGCGATTGAAGGGCACGCC GCCGCATCTGCTCGCGCTGTTCCAGACGGGCGTCGGCGCGCTCGCGCTCGCGCCGCTCGTCCACTACGATGCGCTGCCCG CGACGGCGGGGCAGTGGCTCGATCTCGTCGTGCTCGGCGTCGTGAACACGGGGATCATGTACGTGCTGCTGTACGGCGCG ATCCAGAAGCTGCCGACCGCGACGATCGGCGCGCTGTCGTTCGTCTATCCGGTCGTCGCGATCGCCGTCGACCGGATCGC GTTCGGACAGACGCTCGCGTGGAGCCAGGTGCTGGGCGCGGCGCTGATCCTGCTCGCCGCGGCGGGCGTGAACCTCGGAT GGCGGATCGTACCGCCGCGACGCGTCGCGGCGCGCGGATGA
Upstream 100 bases:
>100_bases CCTTCTTTTCAAAGGTGGAAAGACGCTTTGCGCTCAGTTTATCGATGGAGATGCGCGAATCAAGTCCCTAGAATCGAAGT CAGGCTTTCTTCATGCGGGA
Downstream 100 bases:
>100_bases GCGCAACGGGCGCGTGCGAACGCAACGGCGGGCACGCGCTGCGACATTCCGACACGCGCAAGAAAGTTGTAGGGAAATTC CTGATGCGATGCAGCGAGGG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MHMASSSVSYDARRGALEMVVAMLMSGTIGWLVVSSRQHLMNVVFFRCLFGGATMLIICAALGLLRRDLLTKRAIALALT GSVAIVANWVLLFAAYSRASISMATAVYNTQPFMLVALGAIVFRERLTASAVAWLVLAFGGLALVVRVEPAVLAVSGEYL SGVALALGAAFLYAVSSIITKRLKGTPPHLLALFQTGVGALALAPLVHYDALPATAGQWLDLVVLGVVNTGIMYVLLYGA IQKLPTATIGALSFVYPVVAIAVDRIAFGQTLAWSQVLGAALILLAAAGVNLGWRIVPPRRVAARG
Sequences:
>Translated_306_residues MHMASSSVSYDARRGALEMVVAMLMSGTIGWLVVSSRQHLMNVVFFRCLFGGATMLIICAALGLLRRDLLTKRAIALALT GSVAIVANWVLLFAAYSRASISMATAVYNTQPFMLVALGAIVFRERLTASAVAWLVLAFGGLALVVRVEPAVLAVSGEYL SGVALALGAAFLYAVSSIITKRLKGTPPHLLALFQTGVGALALAPLVHYDALPATAGQWLDLVVLGVVNTGIMYVLLYGA IQKLPTATIGALSFVYPVVAIAVDRIAFGQTLAWSQVLGAALILLAAAGVNLGWRIVPPRRVAARG >Mature_306_residues MHMASSSVSYDARRGALEMVVAMLMSGTIGWLVVSSRQHLMNVVFFRCLFGGATMLIICAALGLLRRDLLTKRAIALALT GSVAIVANWVLLFAAYSRASISMATAVYNTQPFMLVALGAIVFRERLTASAVAWLVLAFGGLALVVRVEPAVLAVSGEYL SGVALALGAAFLYAVSSIITKRLKGTPPHLLALFQTGVGALALAPLVHYDALPATAGQWLDLVVLGVVNTGIMYVLLYGA IQKLPTATIGALSFVYPVVAIAVDRIAFGQTLAWSQVLGAALILLAAAGVNLGWRIVPPRRVAARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32162; Mature: 32162
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMASSSVSYDARRGALEMVVAMLMSGTIGWLVVSSRQHLMNVVFFRCLFGGATMLIICA CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH ALGLLRRDLLTKRAIALALTGSVAIVANWVLLFAAYSRASISMATAVYNTQPFMLVALGA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IVFRERLTASAVAWLVLAFGGLALVVRVEPAVLAVSGEYLSGVALALGAAFLYAVSSIIT HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH KRLKGTPPHLLALFQTGVGALALAPLVHYDALPATAGQWLDLVVLGVVNTGIMYVLLYGA HHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IQKLPTATIGALSFVYPVVAIAVDRIAFGQTLAWSQVLGAALILLAAAGVNLGWRIVPPR HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCH RVAARG HHCCCC >Mature Secondary Structure MHMASSSVSYDARRGALEMVVAMLMSGTIGWLVVSSRQHLMNVVFFRCLFGGATMLIICA CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH ALGLLRRDLLTKRAIALALTGSVAIVANWVLLFAAYSRASISMATAVYNTQPFMLVALGA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IVFRERLTASAVAWLVLAFGGLALVVRVEPAVLAVSGEYLSGVALALGAAFLYAVSSIIT HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH KRLKGTPPHLLALFQTGVGALALAPLVHYDALPATAGQWLDLVVLGVVNTGIMYVLLYGA HHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IQKLPTATIGALSFVYPVVAIAVDRIAFGQTLAWSQVLGAALILLAAAGVNLGWRIVPPR HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCH RVAARG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377; 8316082 [H]