| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718482
Identifier: 83718482
GI number: 83718482
Start: 3081345
End: 3084173
Strand: Reverse
Name: 83718482
Synonym: BTH_I2693
Alternate gene names: NA
Gene position: 3084173-3081345 (Counterclockwise)
Preceding gene: 83718505
Following gene: 83720923
Centisome position: 80.97
GC content: 70.48
Gene sequence:
>2829_bases ATGTCGATCCCAACTGACGTTCTGCAAGCACTCTTCGGCGGCTGGTCGCAACACGACCGCTTTCTCTGGATCACGACGCC GCTCGGCGCGAACGCGCTCGTCGCGGAAAGCCTGCATGGCTGGGAGGCACTCGATCAGGGGGGCTTTCGTTTTCAGCTCA CCGCGCTCGCCGAGAATCCGTCGCTGCCGCTCGCGCAGTTGATCGGCGCGCCGATCCTGATCGAATGGCAGGCGCAGGAA GGGCGCGACGCGCGCCGGCCGTTCCACGGCCACGTGATCGCCGCCGAGCTCGTCGGCTACAACGGCGGCCTCGCACGCGT GCGGCTCGTCGTCGAGCCGTGGCTCACGCTGCTGCGGCAGCGCGTCGACAGCTACAACTATCTGAACGCGAGCGTCGTCG AGATCAGCGAACAGGTGTTCCGCCGTTACGCGCGCGGCGCGATCGCGCCCGCATGGCGATGGGCGCTCGCGGATGCGGCG AAGTACCCGAAGCGCAGCCTGACCGCGCAAGCCGGCGAATCCGATTTCGACTTCCTCGAGCGCCTCTGGGCGGAGGAAGG CATCTTCTACTGGTTCGAGCACGAAGGCGACGCGCGTGCGTCGAGCCTCGGCAAGCACACGCTCGTGCTCGCCGATTCGA ATCAGCGCTTCGCGCCCGACGAACCCGAGCTCGTCGGCTTCCATCAGACGAGCGACGACGATCCGCAAGGCTGCATCCAG CACTTCATGCACGCGCGGCGCTGGCGGATCGGCAGCGTCGCGCGCGCGAGCTGGGATCACCGCAGCCTGTCGACGCGGCC GACGGGCGCGCGCGCGAACGGCGCGGTCGCGCCGGGCGAGGACCGCGACGTCGCCGGCCCGTACGCATACCAGACTGGCG CGATCGGAGACCGGCGCGCGCAGCAGCAACTCGATGCGCAGCGCGTGGCCGCGCTGCAGAGCGAAGGCCGCGGCACGCGC CGCGATCTGCGGCCTGGGCTGCGTTTTGCGATTGCGCATCATCCGACGCTCGGCGCATCGGATGCGTTCATCTGTCTGCG CGTCGAGCATTCGGCGCGCGCGAACGTCGATGCGACCGTGCGCAGCGCGATCGAACAGCGCCTCGGCGCGATTGCGTCGA TCGCCGATGCCGCGCCGGCGCCGTATGGTCCCGCGAGCGCGCTGAATGCGGCGCTCGGCGCCGACACGCATCACGGCGGA TCGCTGATGCAGGACGACGCTGTCTATCGCAATCGCTTCGTCGCGTTGCCCGCCGAGCAGGCGTATCGGCCGCTCGCCGC GTCCGGCCATGGCGCGCGCATGCACCCGGTCGCCGTGATGCCGGGGGCGCAGACGGCGATCGCCGTGGGCGCGGGCGATC CCGTTCACACCGACCGGGATCACCGGATTCGGATTCAGCATCACGCGCAGCGCGGCCGGAATGCCGCGAGCCGCGAAGAT CATCCGCATGCGGCGAATGCGCCGGCGGACCGAGGCGCCGGCACGTGGACGCGCATGCTGACGCCCGTGGGCGGCGACAA CTGGGGCGGCGTGAGCGTGCCGCGCGTCGGGCAGGAAGTGTGGACTGAATGGCTCGAAGGCCAGCCCGACCGGCCGGTTG CGGTGGCCGCGCTCTACAACGGCCGGGGCAATGCCGACGCGCAGCACAACGCGCAGGCGGGAGGCCCGAGCGGCAGTACC GGCAATGCGGCCGCATGGTTTGCCGGCAATACGCACGCGGCGGTGCTCACGGGCTTCAAGACGCAGGACATGAGCATGAG CCAGCAGGGCACGGGCGGCTATCGGCAATTCATGCTCGACGATACGGCCGGCCAGTCGAGCGCGCGTCTGTACACGACGG ACCGCAACAGCGGGCTCACGCTCGGGCACATGAAGCAGACGCAGGACAACCAGCGCCAGGCCGATCGCGGCTATGGCGCG GAACTGGCGACGGATGGCGCCGGCGCACTGCGCGGCGGCGCGGGGCTCTTGATCAGCACGGCGCCCGGCGTGAGTCAGAT GGATGCGAGCGCGCCGAGCCAGGTGCTCGCGCAGCATCGCCAGACGTTGCAAAGCCTCGCGGAGCTCGCGCAAAAGCAAG GCGCGGAGCCGGGCGGCGCGGTGCCTGAGGCGGCGAGCGGAGCGGGCGCGACGTCGACGGGGGCGGCGGCGGGCAAGCCT TTGCCTGCAGTCGACGGCATCGAGCAGAGCCGCGAAGCGATCGGCGCGACGCGAGAAGGAGGGGGCGGCGACACGGCGGG CGGCGGGAGCGGCAGCGCGGTCGCGTGGAGCAAGCCGCATCTCGTCGCGCACGGCGAGGCGGGGCTGGCCGCGATGTCGG CGAAGAGCCACGTGTGGGTGTCGGGTACCGAGACGGTGCTGAGCGCCGGACAGGACGTGCAATTGACGGCGAAGGGCAAG ACGAGCGTCGTCGCGAATCACGGCGTCTCGCTGTATACGCAGGGCGCGGCGGGCGATGGGCGGCCGGTTGCCGGCCAGGG CATCGCGTTGCACGCGGCGTCCGGTTCGGTGAGCGTGCAGGCGCAGAACGCCGGCAAGCTGAGCGCGAGCGCGCAGAAGG CGGTGACGCTCGCGAGCGCGCAGGGCAGCGCGTCCGTGCAGGCGCAACAGCGCGTCCTGCTGAGCGCGGCGAAGGCGTAT CTGAAGATGGAAGGCAACGACATCGTCGTCGGCGCGCCGGGGCGCGCGGATTTCAAGGCGGCGGCGCATCAGTTGACGGG GCCGAAGAGCGCGGGGGCGCAGAACGCGTTGGGCAAGGGTGCTTCGAAGGATTGTCCGCAGACGATGGGCGACATGATTT CGTCCAGCGCCGCATTCGCCGATCTATAA
Upstream 100 bases:
>100_bases ACCCGCGCATCGAGCCGCAAGCGCTCGCCGCGCCGCGCCCCAACACCCGAACCCGCCCCGCGAAAGCATCGCGCGCCGGG CCTATTGAACGGAACGAGCC
Downstream 100 bases:
>100_bases GCCATGGCCGATACATACCCGCTTTGGGAAGCGCAGCCGGGCAACGCGATTGCGGATGCCGAATCGGTTTCCCCTGTCGA GGTCCTGCTGGCCGAACTGC
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Vgr-Related Protein; Rhs Element Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Family Protein; VGR-Like Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; Conserved Hypothethical Protein; Rhs Element VGR-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Fimbrial Operon Related Protein; Vgr Protein; VgrG Family T6SS G
Number of amino acids: Translated: 942; Mature: 941
Protein sequence:
>942_residues MSIPTDVLQALFGGWSQHDRFLWITTPLGANALVAESLHGWEALDQGGFRFQLTALAENPSLPLAQLIGAPILIEWQAQE GRDARRPFHGHVIAAELVGYNGGLARVRLVVEPWLTLLRQRVDSYNYLNASVVEISEQVFRRYARGAIAPAWRWALADAA KYPKRSLTAQAGESDFDFLERLWAEEGIFYWFEHEGDARASSLGKHTLVLADSNQRFAPDEPELVGFHQTSDDDPQGCIQ HFMHARRWRIGSVARASWDHRSLSTRPTGARANGAVAPGEDRDVAGPYAYQTGAIGDRRAQQQLDAQRVAALQSEGRGTR RDLRPGLRFAIAHHPTLGASDAFICLRVEHSARANVDATVRSAIEQRLGAIASIADAAPAPYGPASALNAALGADTHHGG SLMQDDAVYRNRFVALPAEQAYRPLAASGHGARMHPVAVMPGAQTAIAVGAGDPVHTDRDHRIRIQHHAQRGRNAASRED HPHAANAPADRGAGTWTRMLTPVGGDNWGGVSVPRVGQEVWTEWLEGQPDRPVAVAALYNGRGNADAQHNAQAGGPSGST GNAAAWFAGNTHAAVLTGFKTQDMSMSQQGTGGYRQFMLDDTAGQSSARLYTTDRNSGLTLGHMKQTQDNQRQADRGYGA ELATDGAGALRGGAGLLISTAPGVSQMDASAPSQVLAQHRQTLQSLAELAQKQGAEPGGAVPEAASGAGATSTGAAAGKP LPAVDGIEQSREAIGATREGGGGDTAGGGSGSAVAWSKPHLVAHGEAGLAAMSAKSHVWVSGTETVLSAGQDVQLTAKGK TSVVANHGVSLYTQGAAGDGRPVAGQGIALHAASGSVSVQAQNAGKLSASAQKAVTLASAQGSASVQAQQRVLLSAAKAY LKMEGNDIVVGAPGRADFKAAAHQLTGPKSAGAQNALGKGASKDCPQTMGDMISSSAAFADL
Sequences:
>Translated_942_residues MSIPTDVLQALFGGWSQHDRFLWITTPLGANALVAESLHGWEALDQGGFRFQLTALAENPSLPLAQLIGAPILIEWQAQE GRDARRPFHGHVIAAELVGYNGGLARVRLVVEPWLTLLRQRVDSYNYLNASVVEISEQVFRRYARGAIAPAWRWALADAA KYPKRSLTAQAGESDFDFLERLWAEEGIFYWFEHEGDARASSLGKHTLVLADSNQRFAPDEPELVGFHQTSDDDPQGCIQ HFMHARRWRIGSVARASWDHRSLSTRPTGARANGAVAPGEDRDVAGPYAYQTGAIGDRRAQQQLDAQRVAALQSEGRGTR RDLRPGLRFAIAHHPTLGASDAFICLRVEHSARANVDATVRSAIEQRLGAIASIADAAPAPYGPASALNAALGADTHHGG SLMQDDAVYRNRFVALPAEQAYRPLAASGHGARMHPVAVMPGAQTAIAVGAGDPVHTDRDHRIRIQHHAQRGRNAASRED HPHAANAPADRGAGTWTRMLTPVGGDNWGGVSVPRVGQEVWTEWLEGQPDRPVAVAALYNGRGNADAQHNAQAGGPSGST GNAAAWFAGNTHAAVLTGFKTQDMSMSQQGTGGYRQFMLDDTAGQSSARLYTTDRNSGLTLGHMKQTQDNQRQADRGYGA ELATDGAGALRGGAGLLISTAPGVSQMDASAPSQVLAQHRQTLQSLAELAQKQGAEPGGAVPEAASGAGATSTGAAAGKP LPAVDGIEQSREAIGATREGGGGDTAGGGSGSAVAWSKPHLVAHGEAGLAAMSAKSHVWVSGTETVLSAGQDVQLTAKGK TSVVANHGVSLYTQGAAGDGRPVAGQGIALHAASGSVSVQAQNAGKLSASAQKAVTLASAQGSASVQAQQRVLLSAAKAY LKMEGNDIVVGAPGRADFKAAAHQLTGPKSAGAQNALGKGASKDCPQTMGDMISSSAAFADL >Mature_941_residues SIPTDVLQALFGGWSQHDRFLWITTPLGANALVAESLHGWEALDQGGFRFQLTALAENPSLPLAQLIGAPILIEWQAQEG RDARRPFHGHVIAAELVGYNGGLARVRLVVEPWLTLLRQRVDSYNYLNASVVEISEQVFRRYARGAIAPAWRWALADAAK YPKRSLTAQAGESDFDFLERLWAEEGIFYWFEHEGDARASSLGKHTLVLADSNQRFAPDEPELVGFHQTSDDDPQGCIQH FMHARRWRIGSVARASWDHRSLSTRPTGARANGAVAPGEDRDVAGPYAYQTGAIGDRRAQQQLDAQRVAALQSEGRGTRR DLRPGLRFAIAHHPTLGASDAFICLRVEHSARANVDATVRSAIEQRLGAIASIADAAPAPYGPASALNAALGADTHHGGS LMQDDAVYRNRFVALPAEQAYRPLAASGHGARMHPVAVMPGAQTAIAVGAGDPVHTDRDHRIRIQHHAQRGRNAASREDH PHAANAPADRGAGTWTRMLTPVGGDNWGGVSVPRVGQEVWTEWLEGQPDRPVAVAALYNGRGNADAQHNAQAGGPSGSTG NAAAWFAGNTHAAVLTGFKTQDMSMSQQGTGGYRQFMLDDTAGQSSARLYTTDRNSGLTLGHMKQTQDNQRQADRGYGAE LATDGAGALRGGAGLLISTAPGVSQMDASAPSQVLAQHRQTLQSLAELAQKQGAEPGGAVPEAASGAGATSTGAAAGKPL PAVDGIEQSREAIGATREGGGGDTAGGGSGSAVAWSKPHLVAHGEAGLAAMSAKSHVWVSGTETVLSAGQDVQLTAKGKT SVVANHGVSLYTQGAAGDGRPVAGQGIALHAASGSVSVQAQNAGKLSASAQKAVTLASAQGSASVQAQQRVLLSAAKAYL KMEGNDIVVGAPGRADFKAAAHQLTGPKSAGAQNALGKGASKDCPQTMGDMISSSAAFADL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98432; Mature: 98301
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPTDVLQALFGGWSQHDRFLWITTPLGANALVAESLHGWEALDQGGFRFQLTALAENP CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCHHHHCCCCCEEEEEEECCCC SLPLAQLIGAPILIEWQAQEGRDARRPFHGHVIAAELVGYNGGLARVRLVVEPWLTLLRQ CCCHHHHCCCCEEEEEECCCCCHHCCCCCCCEEEEEEECCCCCHHEEEEHHHHHHHHHHH RVDSYNYLNASVVEISEQVFRRYARGAIAPAWRWALADAAKYPKRSLTAQAGESDFDFLE HHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH RLWAEEGIFYWFEHEGDARASSLGKHTLVLADSNQRFAPDEPELVGFHQTSDDDPQGCIQ HHHHCCCEEEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHH HFMHARRWRIGSVARASWDHRSLSTRPTGARANGAVAPGEDRDVAGPYAYQTGAIGDRRA HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH QQQLDAQRVAALQSEGRGTRRDLRPGLRFAIAHHPTLGASDAFICLRVEHSARANVDATV HHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHH RSAIEQRLGAIASIADAAPAPYGPASALNAALGADTHHGGSLMQDDAVYRNRFVALPAEQ HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCEEEECCHHH AYRPLAASGHGARMHPVAVMPGAQTAIAVGAGDPVHTDRDHRIRIQHHAQRGRNAASRED HCCCCCCCCCCCEECCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHCCCCCCCCC HPHAANAPADRGAGTWTRMLTPVGGDNWGGVSVPRVGQEVWTEWLEGQPDRPVAVAALYN CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEC GRGNADAQHNAQAGGPSGSTGNAAAWFAGNTHAAVLTGFKTQDMSMSQQGTGGYRQFMLD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEE DTAGQSSARLYTTDRNSGLTLGHMKQTQDNQRQADRGYGAELATDGAGALRGGAGLLIST CCCCCCCCEEEEECCCCCCEECCCHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC APGVSQMDASAPSQVLAQHRQTLQSLAELAQKQGAEPGGAVPEAASGAGATSTGAAAGKP CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPAVDGIEQSREAIGATREGGGGDTAGGGSGSAVAWSKPHLVAHGEAGLAAMSAKSHVWV CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEEECCCCEEEE SGTETVLSAGQDVQLTAKGKTSVVANHGVSLYTQGAAGDGRPVAGQGIALHAASGSVSVQ CCCHHHHHCCCCEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEE AQNAGKLSASAQKAVTLASAQGSASVQAQQRVLLSAAKAYLKMEGNDIVVGAPGRADFKA ECCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHH AAHQLTGPKSAGAQNALGKGASKDCPQTMGDMISSSAAFADL HHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHCCC >Mature Secondary Structure SIPTDVLQALFGGWSQHDRFLWITTPLGANALVAESLHGWEALDQGGFRFQLTALAENP CCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCHHHHCCCCCEEEEEEECCCC SLPLAQLIGAPILIEWQAQEGRDARRPFHGHVIAAELVGYNGGLARVRLVVEPWLTLLRQ CCCHHHHCCCCEEEEEECCCCCHHCCCCCCCEEEEEEECCCCCHHEEEEHHHHHHHHHHH RVDSYNYLNASVVEISEQVFRRYARGAIAPAWRWALADAAKYPKRSLTAQAGESDFDFLE HHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH RLWAEEGIFYWFEHEGDARASSLGKHTLVLADSNQRFAPDEPELVGFHQTSDDDPQGCIQ HHHHCCCEEEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHH HFMHARRWRIGSVARASWDHRSLSTRPTGARANGAVAPGEDRDVAGPYAYQTGAIGDRRA HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH QQQLDAQRVAALQSEGRGTRRDLRPGLRFAIAHHPTLGASDAFICLRVEHSARANVDATV HHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHH RSAIEQRLGAIASIADAAPAPYGPASALNAALGADTHHGGSLMQDDAVYRNRFVALPAEQ HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCEEEECCHHH AYRPLAASGHGARMHPVAVMPGAQTAIAVGAGDPVHTDRDHRIRIQHHAQRGRNAASRED HCCCCCCCCCCCEECCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHCCCCCCCCC HPHAANAPADRGAGTWTRMLTPVGGDNWGGVSVPRVGQEVWTEWLEGQPDRPVAVAALYN CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEC GRGNADAQHNAQAGGPSGSTGNAAAWFAGNTHAAVLTGFKTQDMSMSQQGTGGYRQFMLD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEE DTAGQSSARLYTTDRNSGLTLGHMKQTQDNQRQADRGYGAELATDGAGALRGGAGLLIST CCCCCCCCEEEEECCCCCCEECCCHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC APGVSQMDASAPSQVLAQHRQTLQSLAELAQKQGAEPGGAVPEAASGAGATSTGAAAGKP CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPAVDGIEQSREAIGATREGGGGDTAGGGSGSAVAWSKPHLVAHGEAGLAAMSAKSHVWV CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEEECCCCEEEE SGTETVLSAGQDVQLTAKGKTSVVANHGVSLYTQGAAGDGRPVAGQGIALHAASGSVSVQ CCCHHHHHCCCCEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEE AQNAGKLSASAQKAVTLASAQGSASVQAQQRVLLSAAKAYLKMEGNDIVVGAPGRADFKA ECCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHH AAHQLTGPKSAGAQNALGKGASKDCPQTMGDMISSSAAFADL HHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA