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The map label for this gene is ribB [H]

Identifier: 83718467

GI number: 83718467

Start: 679358

End: 680365

Strand: Direct

Name: ribB [H]

Synonym: BTH_I0595

Alternate gene names: 83718467

Gene position: 679358-680365 (Clockwise)

Preceding gene: 83720918

Following gene: 83721562

Centisome position: 17.83

GC content: 69.64

Gene sequence:

>1008_bases
GTGCGTCTTCAGGGCGGGGCGAAATTCCCCACCGGCGGTAGGCCGGCATGTTGCCGGCGAGCCCGCGAGCGCCCGCGCGA
TGCGCGGGGTCAGCAGATCTGGTCCGATGCCAGAGCCGACGGTCATAGTCCGGATGAGAGAAGATGTGCAGATGGTCATG
TGCGCCCCGTCTCGCCCGCGGCGCGCGGCGTCGTCCGCGCGGCGCGGAAGCGGCGTCGCGCTGTCTGTTTGCTATGCCCT
GAAACGTTTTTCGCCCCATTCTTTCCGCGAGGAGCGTTTCACATCATGTCGTTTCCGTTGCCTTCGAAGTCGGCGCCCGC
CGACGCTTTCTCCGATCTTCCATTGCTCGATGTCGAACCGGTGCCGCCGCGCATCGCCGCCGCGCTCGCCGCGCTGCGCG
AAGGGCGCGCGGTCGTGCTGCAGGACGACCACGACCGCGAGAACGAAGCCGATCTGATCGTTGCCGCCGAACGGCTCACC
GACGAGACGATGGCGCTCCTGATCCGCGAGTGCAGCGGCATCGTCTGCCTGTGCCTGACGGACGAAAAGGTGCGCGCGCT
CGCGCTGCCGCCGATGGCGCAATTGAACGAGAGCAAGAACGGCACCGCGTTCACGGTATCGATCGAGGCGCGCGCCGGCG
TGACGACGGGCGTGTCCGCCGCCGATCGCGTGACGACGATTCGCGCGGCGATCGCCGACGACGCACAGCCGCACGACATC
GTGCGCCCCGGCCACGTGTTTCCGCTGCGCGCGGCGCCGGGCGGAGTGCTCGCGCGGCGCGGCCATACCGAGGGCACCGT
CGATCTCGCGATCCTCGCCGGGCTGAAGCCCGCGGGCGTGCTGTGCGAGCTGATGAATCCGGACGGCACGATGACGCGCG
GCGCGGACGTCGAGCGTTTCGCCGCGCAGCACGGGCTGCCGATGCTGACGATCGCGGAGCTCGTCGAATTCCGCGAACGG
CTCGCGTCGTTGCGCGAGCGCGACGCGTGCTGCGAGGGCGTCGCCTGA

Upstream 100 bases:

>100_bases
GCGCGGTTTAGACGGATTCGTCAGTAGGGTCTTGTCGCGTTCCCGCTGCGGCGATTGATCGGCTGTTGTATGCTTCAGCG
GCCGGTTTGTCCGGCAATCA

Downstream 100 bases:

>100_bases
CCGACTCCGGTTCGCCGGGCGACCGCGTGCTGCGTGCAAGCGGCGCCGCACGCGACGCGGCTTTGCCCGGCTACGACTGC
ACGTCGCCGAATTCGCCGCG

Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase

Products: NA

Alternate protein names: DHBP synthase [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRLQGGAKFPTGGRPACCRRARERPRDARGQQIWSDARADGHSPDERRCADGHVRPVSPAARGVVRAARKRRRAVCLLCP
ETFFAPFFPRGAFHIMSFPLPSKSAPADAFSDLPLLDVEPVPPRIAAALAALREGRAVVLQDDHDRENEADLIVAAERLT
DETMALLIRECSGIVCLCLTDEKVRALALPPMAQLNESKNGTAFTVSIEARAGVTTGVSAADRVTTIRAAIADDAQPHDI
VRPGHVFPLRAAPGGVLARRGHTEGTVDLAILAGLKPAGVLCELMNPDGTMTRGADVERFAAQHGLPMLTIAELVEFRER
LASLRERDACCEGVA

Sequences:

>Translated_335_residues
MRLQGGAKFPTGGRPACCRRARERPRDARGQQIWSDARADGHSPDERRCADGHVRPVSPAARGVVRAARKRRRAVCLLCP
ETFFAPFFPRGAFHIMSFPLPSKSAPADAFSDLPLLDVEPVPPRIAAALAALREGRAVVLQDDHDRENEADLIVAAERLT
DETMALLIRECSGIVCLCLTDEKVRALALPPMAQLNESKNGTAFTVSIEARAGVTTGVSAADRVTTIRAAIADDAQPHDI
VRPGHVFPLRAAPGGVLARRGHTEGTVDLAILAGLKPAGVLCELMNPDGTMTRGADVERFAAQHGLPMLTIAELVEFRER
LASLRERDACCEGVA
>Mature_335_residues
MRLQGGAKFPTGGRPACCRRARERPRDARGQQIWSDARADGHSPDERRCADGHVRPVSPAARGVVRAARKRRRAVCLLCP
ETFFAPFFPRGAFHIMSFPLPSKSAPADAFSDLPLLDVEPVPPRIAAALAALREGRAVVLQDDHDRENEADLIVAAERLT
DETMALLIRECSGIVCLCLTDEKVRALALPPMAQLNESKNGTAFTVSIEARAGVTTGVSAADRVTTIRAAIADDAQPHDI
VRPGHVFPLRAAPGGVLARRGHTEGTVDLAILAGLKPAGVLCELMNPDGTMTRGADVERFAAQHGLPMLTIAELVEFRER
LASLRERDACCEGVA

Specific function: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate [H]

COG id: COG0108

COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHBP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1789420, Length=196, Percent_Identity=61.734693877551, Blast_Score=241, Evalue=4e-65,
Organism=Saccharomyces cerevisiae, GI6320695, Length=204, Percent_Identity=42.156862745098, Blast_Score=167, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR000422 [H]

Pfam domain/function: PF00926 DHBP_synthase [H]

EC number: =4.1.99.12 [H]

Molecular weight: Translated: 36036; Mature: 36036

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQGGAKFPTGGRPACCRRARERPRDARGQQIWSDARADGHSPDERRCADGHVRPVSPA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHH
ARGVVRAARKRRRAVCLLCPETFFAPFFPRGAFHIMSFPLPSKSAPADAFSDLPLLDVEP
HHHHHHHHHHHCCEEEEECCHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCC
VPPRIAAALAALREGRAVVLQDDHDRENEADLIVAAERLTDETMALLIRECSGIVCLCLT
CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEEC
DEKVRALALPPMAQLNESKNGTAFTVSIEARAGVTTGVSAADRVTTIRAAIADDAQPHDI
CCCCCEEECCCHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
VRPGHVFPLRAAPGGVLARRGHTEGTVDLAILAGLKPAGVLCELMNPDGTMTRGADVERF
CCCCCEEEECCCCCCCEEECCCCCCCEEEEEEECCCCHHHEEEEECCCCCCCCCCCHHHH
AAQHGLPMLTIAELVEFRERLASLRERDACCEGVA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLQGGAKFPTGGRPACCRRARERPRDARGQQIWSDARADGHSPDERRCADGHVRPVSPA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHH
ARGVVRAARKRRRAVCLLCPETFFAPFFPRGAFHIMSFPLPSKSAPADAFSDLPLLDVEP
HHHHHHHHHHHCCEEEEECCHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCC
VPPRIAAALAALREGRAVVLQDDHDRENEADLIVAAERLTDETMALLIRECSGIVCLCLT
CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEEC
DEKVRALALPPMAQLNESKNGTAFTVSIEARAGVTTGVSAADRVTTIRAAIADDAQPHDI
CCCCCEEECCCHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
VRPGHVFPLRAAPGGVLARRGHTEGTVDLAILAGLKPAGVLCELMNPDGTMTRGADVERF
CCCCCEEEECCCCCCCEEECCCCCCCEEEEEEECCCCHHHEEEEECCCCCCCCCCCHHHH
AAQHGLPMLTIAELVEFRERLASLRERDACCEGVA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA