| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is purT [H]
Identifier: 83718462
GI number: 83718462
Start: 1110682
End: 1112112
Strand: Direct
Name: purT [H]
Synonym: BTH_I0979
Alternate gene names: 83718462
Gene position: 1110682-1112112 (Clockwise)
Preceding gene: 83720798
Following gene: 83719230
Centisome position: 29.16
GC content: 71.42
Gene sequence:
>1431_bases ATGAACCGGCCGTTTCGCCGTCTGTTTCGCCGGCCGTTTCGATGCGCGGGGCGCGATGCCGAGCGCATGCGCAACGCGCG CGGCCTGCCGCTCGCGCGCGTCAGGCCGCGCCGGCCGGCGACCCGTCGCGCGAGGCCCGGGCGACGGGCGGCGCGCGTGC CTCGCGTGTTAGCATCGCAAGTCGTTTTCGCCATCCATCATCCAGCGGGAAATCTCATGCAGATCGGTCAGCGGCTCGGC ACGCCGCTTTCGCCGTCCGCCACGCGCGTCATGCTGCTCGGCGCGGGCGAGTTGGGCAAGGAAGTCATCATCGCGTTGCA GCGGCTCGGCGTCGAAGTGATCGCCGTCGACCGCTATCCGAACGCACCCGGGCATCAGGTCGCGCATCGCGCGCACGTGA TCGACATGACGGACCCGGACGCGCTGCGCGCGCTCGTCGACGCGGAGCGTGCGCATCTCGTCGTGCCGGAAATCGAGGCG ATTGCGACCGACGCGCTCGCCGAGATCGAAGCGGCGGGCGTCGCCGAGGTGATCCCGACCGCGCGCGCGACGCAGCTCAC GATGAATCGCGAGGGCATCCGCCGGCTCGCGGCCGAGGAGCTTGGGCTGCCCACGTCGCCGTACGCGTTCGCGCAGTCGT TCGACGCGTTCAGGGCGGCCGTCGCGCAGATCGGTTTTCCGTGCGTCGTGAAGCCCGTGATGTCGTCGTCGGGCAAGGGG CAGTCGGTCGTGAGGAGCGACGCCGACGTCGAGCCCGCGTGGCAGTACGCGATGGCGGGCGGGCGCGTGAATCACGGCCG CGTGATCGTCGAGGGCTTCGTGCAGTTCGATTACGAGATCACGCAGCTCACGGTGCGCGCGATCGATCCGGCGAGCCTCA AGACGCGCACCTATTTCTGCGAGCCGATCGGGCATGTGCAGGTCGCGGGCGACTATGTCGAATCGTGGCAGCCGCAGCCG ATGAGCGCGAAGGCGCTCGAACGCTCGCGCGACATCGCGCATCGCGTGACGAGCGCGCTCGGCGGCCGCGGGATCTTCGG CGTCGAGCTGTTCGTGCGCGGCGACGATGTCTGGTTCTCCGAGGTGAGCCCGCGCCCGCACGACACGGGGCTCGTGACGC TCGCGTCGCAGCGCCAGTCGGAGTTCGAATTGCATGCGCGCGCGATCCTCGGCCTGCCGGTCGAGCCGGCGCTCGCGACG CCCGCCGCGTCGGCCGTGATCTACGGCGGGCTCGACGAGGCGGGCATCGCATTCGAAGGCGTGCGCGACGCGCTCGCGGT GCCGGGCGCCGACCTGCGGCTGTTCGGCAAGCCCGAGAGCTTCGCGAAGCGCCGGATGGGCGTCGCGCTCGCGACGGGCG CGAACGTCGACGAAGCGCGCGAGCGCGCGAAGCGGGCGGCCGCCGCGGTGCGTCCCGTGTCCGCGCGCTGA
Upstream 100 bases:
>100_bases GCGGGCGTTGCGATGACCGCCGAGCGACGCGGCGGTCATGGGGAACGCAGGAGGCGCGAGATGGCGATCCCGGCTCCCAC GCGTCGTAGCTGCGACTGCG
Downstream 100 bases:
>100_bases CGAACGGCGGCGTGCGCTGCGACCGGATCGTGCCGGTCGCGCCGTGAGCCGCTGCGTTCGCAGCAGTCGTGGTTGCCGGC CCGATGCGGCGCGCTTGCGC
Product: phosphoribosylglycinamide formyltransferase 2
Products: 5'-Phosphoribosyl-N-Formylglycinamide; Pyrophosphate; acetylphosphate; ADP [C]
Alternate protein names: GART 2; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2 [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MNRPFRRLFRRPFRCAGRDAERMRNARGLPLARVRPRRPATRRARPGRRAARVPRVLASQVVFAIHHPAGNLMQIGQRLG TPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYPNAPGHQVAHRAHVIDMTDPDALRALVDAERAHLVVPEIEA IATDALAEIEAAGVAEVIPTARATQLTMNREGIRRLAAEELGLPTSPYAFAQSFDAFRAAVAQIGFPCVVKPVMSSSGKG QSVVRSDADVEPAWQYAMAGGRVNHGRVIVEGFVQFDYEITQLTVRAIDPASLKTRTYFCEPIGHVQVAGDYVESWQPQP MSAKALERSRDIAHRVTSALGGRGIFGVELFVRGDDVWFSEVSPRPHDTGLVTLASQRQSEFELHARAILGLPVEPALAT PAASAVIYGGLDEAGIAFEGVRDALAVPGADLRLFGKPESFAKRRMGVALATGANVDEARERAKRAAAAVRPVSAR
Sequences:
>Translated_476_residues MNRPFRRLFRRPFRCAGRDAERMRNARGLPLARVRPRRPATRRARPGRRAARVPRVLASQVVFAIHHPAGNLMQIGQRLG TPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYPNAPGHQVAHRAHVIDMTDPDALRALVDAERAHLVVPEIEA IATDALAEIEAAGVAEVIPTARATQLTMNREGIRRLAAEELGLPTSPYAFAQSFDAFRAAVAQIGFPCVVKPVMSSSGKG QSVVRSDADVEPAWQYAMAGGRVNHGRVIVEGFVQFDYEITQLTVRAIDPASLKTRTYFCEPIGHVQVAGDYVESWQPQP MSAKALERSRDIAHRVTSALGGRGIFGVELFVRGDDVWFSEVSPRPHDTGLVTLASQRQSEFELHARAILGLPVEPALAT PAASAVIYGGLDEAGIAFEGVRDALAVPGADLRLFGKPESFAKRRMGVALATGANVDEARERAKRAAAAVRPVSAR >Mature_476_residues MNRPFRRLFRRPFRCAGRDAERMRNARGLPLARVRPRRPATRRARPGRRAARVPRVLASQVVFAIHHPAGNLMQIGQRLG TPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYPNAPGHQVAHRAHVIDMTDPDALRALVDAERAHLVVPEIEA IATDALAEIEAAGVAEVIPTARATQLTMNREGIRRLAAEELGLPTSPYAFAQSFDAFRAAVAQIGFPCVVKPVMSSSGKG QSVVRSDADVEPAWQYAMAGGRVNHGRVIVEGFVQFDYEITQLTVRAIDPASLKTRTYFCEPIGHVQVAGDYVESWQPQP MSAKALERSRDIAHRVTSALGGRGIFGVELFVRGDDVWFSEVSPRPHDTGLVTLASQRQSEFELHARAILGLPVEPALAT PAASAVIYGGLDEAGIAFEGVRDALAVPGADLRLFGKPESFAKRRMGVALATGANVDEARERAKRAAAAVRPVSAR
Specific function: Catalyzes two reactions:the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP [H]
COG id: COG0027
COG function: function code F; Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1788155, Length=396, Percent_Identity=63.1313131313131, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6324702, Length=388, Percent_Identity=22.680412371134, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR005862 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: 2.1.2.- [C]
Molecular weight: Translated: 51534; Mature: 51534
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPFRRLFRRPFRCAGRDAERMRNARGLPLARVRPRRPATRRARPGRRAARVPRVLASQ CCCHHHHHHHCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VVFAIHHPAGNLMQIGQRLGTPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYP HEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEECCC NAPGHQVAHRAHVIDMTDPDALRALVDAERAHLVVPEIEAIATDALAEIEAAGVAEVIPT CCCCHHHHHHEEEEECCCHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHCCHHHHHCC ARATQLTMNREGIRRLAAEELGLPTSPYAFAQSFDAFRAAVAQIGFPCVVKPVMSSSGKG CCHHEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCC QSVVRSDADVEPAWQYAMAGGRVNHGRVIVEGFVQFDYEITQLTVRAIDPASLKTRTYFC CHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEHHHCCEEEEEEEEEECCCCCCCEEEEEE EPIGHVQVAGDYVESWQPQPMSAKALERSRDIAHRVTSALGGRGIFGVELFVRGDDVWFS CCCCCEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEE EVSPRPHDTGLVTLASQRQSEFELHARAILGLPVEPALATPAASAVIYGGLDEAGIAFEG CCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHH VRDALAVPGADLRLFGKPESFAKRRMGVALATGANVDEARERAKRAAAAVRPVSAR HHHHHHCCCCCEEEECCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNRPFRRLFRRPFRCAGRDAERMRNARGLPLARVRPRRPATRRARPGRRAARVPRVLASQ CCCHHHHHHHCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VVFAIHHPAGNLMQIGQRLGTPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYP HEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEECCC NAPGHQVAHRAHVIDMTDPDALRALVDAERAHLVVPEIEAIATDALAEIEAAGVAEVIPT CCCCHHHHHHEEEEECCCHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHCCHHHHHCC ARATQLTMNREGIRRLAAEELGLPTSPYAFAQSFDAFRAAVAQIGFPCVVKPVMSSSGKG CCHHEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCC QSVVRSDADVEPAWQYAMAGGRVNHGRVIVEGFVQFDYEITQLTVRAIDPASLKTRTYFC CHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEHHHCCEEEEEEEEEECCCCCCCEEEEEE EPIGHVQVAGDYVESWQPQPMSAKALERSRDIAHRVTSALGGRGIFGVELFVRGDDVWFS CCCCCEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEE EVSPRPHDTGLVTLASQRQSEFELHARAILGLPVEPALATPAASAVIYGGLDEAGIAFEG CCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHH VRDALAVPGADLRLFGKPESFAKRRMGVALATGANVDEARERAKRAAAAVRPVSAR HHHHHHCCCCCEEEECCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Formate; 5'-Phospho-Ribosylglycinamide; acetate; ATP [C]
Specific reaction: Formate + ATP + 5'-Phospho-Ribosylglycinamide = 5'-Phosphoribosyl-N-Formylglycinamide + ADP + Pyrophosphate. acetate + ATP = acetylphosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA