| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83718441
Identifier: 83718441
GI number: 83718441
Start: 130914
End: 131828
Strand: Direct
Name: 83718441
Synonym: BTH_I0112
Alternate gene names: NA
Gene position: 130914-131828 (Clockwise)
Preceding gene: 83719403
Following gene: 83720701
Centisome position: 3.44
GC content: 57.81
Gene sequence:
>915_bases ATGTCGATCGAACAGCTTGCAGATCTAACGCAGCCACAACGGGACCGACTCGCGTTTGTGGAGTTGCGGGTGCGCTTCAT TGGGGAAATACGCCGTCAGGACTTGGTATCGCGGTTTGGTATCCAGTCCGCTGCCGCTTCAAGAGACTTGGCTCTGTACA AGGAGCTGGTTCCGGGCAACATCGACTATGACTCTAAGGGCAAGTCCTACGTCTTGGGCCCTGATTTCCGCCCGCTCTTC GAGTTTCCTCCTGAGCGGGTGCTGTCTTGGCTGACCCAGGGTTTTGGCGACGGAGAGCCCATGCAGCTCAAAGCATGGGT TGCAAGCGAGAGCCCTTCACGGTTGGCGCGCCCGGATCTGACTGTGCTGGCGAGCGTCACCCGCGCGATTCATCAAGGAT GCCCGCTTGCGGTTGAGTACCACTCCATTTCGAGCGGCAAGGCTAACCGGCAGATCGTGCCGTTCGCGCTGATCGATGAT GGTCAGCGATGGCTCGTTCGTGCCTTCGACCGGGAATCGCAGCAGTTCCGCGACTTCGTGATCACGCGCATCAGAAATCC GCAGGTATTGAAGGGCGAGAATCCGGCGCCCCACGAGGCCAGCGACCAAGACATACAGTGGACCCGGATACTGGAATTAG ATCTTGTCCCGCATCCAAATCGACCACATCCCGAAATCTCTGAAATGGACTACAGCATGGAGCGCGGCGTTTGGAAGATG AAGTTGCGTGCTGCGATGGCCGGCTACATTCTCTGCAAGCTGCGCGTGGATTGTTCTCCGACGCACAAATTGAATGGCTC TGAGCACAGGCTCTGGCTCAGAAATCACTTGGCGCTGTACGGCGTTCGAAGCGCCGTATTGGCTCCCGGCTATGAAAGCC CGGAACCCGTCGGACAGGAACAAGATGGCGATTGA
Upstream 100 bases:
>100_bases TGAAGGCGGCGCCATGAGTTAATATGCGCATCCAAAAGTAAACCGTTCTTACGCAACGATCCGTAGGCGGTCACGAACCA ACTGGAACGAGCCACGACGG
Downstream 100 bases:
>100_bases CCGGCCCGTCTGCCAAACAACAAAGGAAGGCTCAGTACGACTCTTCTACGTCGTCTAGCTATGGCCTCCAGCGTAGTAGG AGTTTATCGATGAGTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSIEQLADLTQPQRDRLAFVELRVRFIGEIRRQDLVSRFGIQSAAASRDLALYKELVPGNIDYDSKGKSYVLGPDFRPLF EFPPERVLSWLTQGFGDGEPMQLKAWVASESPSRLARPDLTVLASVTRAIHQGCPLAVEYHSISSGKANRQIVPFALIDD GQRWLVRAFDRESQQFRDFVITRIRNPQVLKGENPAPHEASDQDIQWTRILELDLVPHPNRPHPEISEMDYSMERGVWKM KLRAAMAGYILCKLRVDCSPTHKLNGSEHRLWLRNHLALYGVRSAVLAPGYESPEPVGQEQDGD
Sequences:
>Translated_304_residues MSIEQLADLTQPQRDRLAFVELRVRFIGEIRRQDLVSRFGIQSAAASRDLALYKELVPGNIDYDSKGKSYVLGPDFRPLF EFPPERVLSWLTQGFGDGEPMQLKAWVASESPSRLARPDLTVLASVTRAIHQGCPLAVEYHSISSGKANRQIVPFALIDD GQRWLVRAFDRESQQFRDFVITRIRNPQVLKGENPAPHEASDQDIQWTRILELDLVPHPNRPHPEISEMDYSMERGVWKM KLRAAMAGYILCKLRVDCSPTHKLNGSEHRLWLRNHLALYGVRSAVLAPGYESPEPVGQEQDGD >Mature_303_residues SIEQLADLTQPQRDRLAFVELRVRFIGEIRRQDLVSRFGIQSAAASRDLALYKELVPGNIDYDSKGKSYVLGPDFRPLFE FPPERVLSWLTQGFGDGEPMQLKAWVASESPSRLARPDLTVLASVTRAIHQGCPLAVEYHSISSGKANRQIVPFALIDDG QRWLVRAFDRESQQFRDFVITRIRNPQVLKGENPAPHEASDQDIQWTRILELDLVPHPNRPHPEISEMDYSMERGVWKMK LRAAMAGYILCKLRVDCSPTHKLNGSEHRLWLRNHLALYGVRSAVLAPGYESPEPVGQEQDGD
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34550; Mature: 34419
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEQLADLTQPQRDRLAFVELRVRFIGEIRRQDLVSRFGIQSAAASRDLALYKELVPGN CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC IDYDSKGKSYVLGPDFRPLFEFPPERVLSWLTQGFGDGEPMQLKAWVASESPSRLARPDL CCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCCH TVLASVTRAIHQGCPLAVEYHSISSGKANRQIVPFALIDDGQRWLVRAFDRESQQFRDFV HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH ITRIRNPQVLKGENPAPHEASDQDIQWTRILELDLVPHPNRPHPEISEMDYSMERGVWKM HHHCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHCCHHHHCCHHHH KLRAAMAGYILCKLRVDCSPTHKLNGSEHRLWLRNHLALYGVRSAVLAPGYESPEPVGQE HHHHHHHCEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCC QDGD CCCC >Mature Secondary Structure SIEQLADLTQPQRDRLAFVELRVRFIGEIRRQDLVSRFGIQSAAASRDLALYKELVPGN CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC IDYDSKGKSYVLGPDFRPLFEFPPERVLSWLTQGFGDGEPMQLKAWVASESPSRLARPDL CCCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCCH TVLASVTRAIHQGCPLAVEYHSISSGKANRQIVPFALIDDGQRWLVRAFDRESQQFRDFV HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH ITRIRNPQVLKGENPAPHEASDQDIQWTRILELDLVPHPNRPHPEISEMDYSMERGVWKM HHHCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHCCHHHHCCHHHH KLRAAMAGYILCKLRVDCSPTHKLNGSEHRLWLRNHLALYGVRSAVLAPGYESPEPVGQE HHHHHHHCEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCC QDGD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA