| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fur [H]
Identifier: 83595096
GI number: 83595096
Start: 4315983
End: 4316405
Strand: Direct
Name: fur [H]
Synonym: Rru_A3767
Alternate gene names: 83595096
Gene position: 4315983-4316405 (Clockwise)
Preceding gene: 83595095
Following gene: 83595097
Centisome position: 99.15
GC content: 56.97
Gene sequence:
>423_bases ATGATGTCGAGCATAGAAAAGCGGTGCCTGGAACAGGGCATGAAGATGACCGAGCAGCGTCGGGTCATAGCCCGGGTGTT GTCGGACGCCGAGGATCACCCGGACGTGGAGGAGGTTTACCGCCGCGCCACCGGAATTGACCCGCGTATTTCGATCGCCA CCGTCTATCGCACGGTGCGGTTGTTCGAAGAGGCCGGTATCCTGGAGCGGCATGATTTCCGCGATGGCCGGGCGCGCTAT GAAGAGGTTTCCGAGGATCATCACGATCACCTGATCAATTTGACCACCGGGGACGTGATCGAATTCCATAGTGACCAGAT CGAGGTCATTCAGCAGGAAATCGCCCGCAAGCTGGGATATCGCTTGATCGGGCACCGTCTGGAACTGTATGGCGTTCCGC TGGACGATAAAAAGAAAAGCTAA
Upstream 100 bases:
>100_bases TTTCCGCAAGGCGTCGTGGTGCCATGCCGCGACGCCTTTTCAACACGACCGGCCCAAACTAGTATGAGGCCCGTTGCCGG AAGCGAGGAATGGGTCGTCC
Downstream 100 bases:
>100_bases GGGCGGAAGCGTCGTCCGCGCGCCGGTCGGGGCCGCGCGCGGCATATCGTTGGGGTGCTGTATGGGCGTTCTGGGTGATC TTCGGGCCGGCGGACTTGAA
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MMSSIEKRCLEQGMKMTEQRRVIARVLSDAEDHPDVEEVYRRATGIDPRISIATVYRTVRLFEEAGILERHDFRDGRARY EEVSEDHHDHLINLTTGDVIEFHSDQIEVIQQEIARKLGYRLIGHRLELYGVPLDDKKKS
Sequences:
>Translated_140_residues MMSSIEKRCLEQGMKMTEQRRVIARVLSDAEDHPDVEEVYRRATGIDPRISIATVYRTVRLFEEAGILERHDFRDGRARY EEVSEDHHDHLINLTTGDVIEFHSDQIEVIQQEIARKLGYRLIGHRLELYGVPLDDKKKS >Mature_140_residues MMSSIEKRCLEQGMKMTEQRRVIARVLSDAEDHPDVEEVYRRATGIDPRISIATVYRTVRLFEEAGILERHDFRDGRARY EEVSEDHHDHLINLTTGDVIEFHSDQIEVIQQEIARKLGYRLIGHRLELYGVPLDDKKKS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=120, Percent_Identity=45, Blast_Score=101, Evalue=2e-23,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16389; Mature: 16389
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSSIEKRCLEQGMKMTEQRRVIARVLSDAEDHPDVEEVYRRATGIDPRISIATVYRTVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH LFEEAGILERHDFRDGRARYEEVSEDHHDHLINLTTGDVIEFHSDQIEVIQQEIARKLGY HHHHCCCHHHHCCCCHHHHHHHHHHHHHHCEEECCCCCHHHHCHHHHHHHHHHHHHHHHH RLIGHRLELYGVPLDDKKKS HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMSSIEKRCLEQGMKMTEQRRVIARVLSDAEDHPDVEEVYRRATGIDPRISIATVYRTVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH LFEEAGILERHDFRDGRARYEEVSEDHHDHLINLTTGDVIEFHSDQIEVIQQEIARKLGY HHHHCCCHHHHCCCCHHHHHHHHHHHHHHCEEECCCCCHHHHCHHHHHHHHHHHHHHHHH RLIGHRLELYGVPLDDKKKS HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9835040 [H]