| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83595051
Identifier: 83595051
GI number: 83595051
Start: 4272966
End: 4273880
Strand: Direct
Name: 83595051
Synonym: Rru_A3722
Alternate gene names: NA
Gene position: 4272966-4273880 (Clockwise)
Preceding gene: 83595050
Following gene: 83595052
Centisome position: 98.17
GC content: 69.18
Gene sequence:
>915_bases TTGCCGGCCCGGGCTGACATCCCCCAACGCCCGCTTGTCGCCTATGTGCAAAGCTGGGAAGACGGCCCGGCCGCCCATGG TCGCGACAGCGGTCTGGTCGGTCTGCCCGCCGCCATTGATGTCGCCATCTTGTCCTTCGTCCGCCCCGACGCGGTCTATT CCGGCGGCGAGGATCTGCGCCCGACCGGGCTGGGTTACGCCTATGGACGCGCCGTTCTGGCCGAAGCCATCGCCGAACGC AAGGCGCGGGTGCCCGGAAGTCTGGTGCTGCTCGCCGTCGGCGGCGCCACCTATACCGCTTGGCACGCCCTGGACGCCGC GGCGATCGCCCGGCTGGTTACCGCCGTCGGCGCCGATGGCGTGGATATCGACCTCGAGCTGGATAATCCGGCCTGCCAGT CCGACGGCGGGGCGCGTATCTCGTGTACCGGCGGCTATGTCTGGCGCAGCACGATCAAGGCCCTGCGCGCCGCCCTGCCC CGTCCGAAGGTGATTTCCCTGACCGGGTGGAGCGTCGCCGCCTATGGCGAGGGTCCTTGGGCCGAGGCGCGGCCGACCAG CCAGCATACGGGCGAGCTTCTGGCGCTGTTTCGCCATCCGGTCAGCGCCGAGATCGATCTGGTGACCATCATGGCCTATA ACGCCACCGCCGCTTATGACCCGGTCGAAGCCTATCGGGCCTATCGGGCGGTCTGGGCGGGGCCGCTGAGCCTGGGAGTT CTGGTTCCCCCCGACAACGGGCGCCAGCCCGATCTGACCGCCGCCGAGCTTACCCGCCTGGGCCAAGCCATCGCCGCGGA TCGAAAGGCCGGGATGATGCTCTATGCCTTTGGCATCCCGCCGCAGCCCGGCCAGCTTTCAGCCAATGACATCGTCGAGC AGATCGCCCGCGAAAGGCCGCCGGTCGCGCCCTGA
Upstream 100 bases:
>100_bases ACATCAAGATCCTCTGGCGGACGATTTTCGGCGGCCTGCGCGACCCCTCCGCTCTGCGCTCGCCGGGCTGATCGCCGCCG CCGTTTTGGCGTTTCCCGCC
Downstream 100 bases:
>100_bases CCCCGGCCGGCCTTGCCCGCCCTGGCGGAGGGACGGGCGGGCGCGATCCGTGGAATTTTCCCGATAACACCGGCGACCGA TCGACCCCATATGGGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Chitinase-Like Protein
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPARADIPQRPLVAYVQSWEDGPAAHGRDSGLVGLPAAIDVAILSFVRPDAVYSGGEDLRPTGLGYAYGRAVLAEAIAER KARVPGSLVLLAVGGATYTAWHALDAAAIARLVTAVGADGVDIDLELDNPACQSDGGARISCTGGYVWRSTIKALRAALP RPKVISLTGWSVAAYGEGPWAEARPTSQHTGELLALFRHPVSAEIDLVTIMAYNATAAYDPVEAYRAYRAVWAGPLSLGV LVPPDNGRQPDLTAAELTRLGQAIAADRKAGMMLYAFGIPPQPGQLSANDIVEQIARERPPVAP
Sequences:
>Translated_304_residues MPARADIPQRPLVAYVQSWEDGPAAHGRDSGLVGLPAAIDVAILSFVRPDAVYSGGEDLRPTGLGYAYGRAVLAEAIAER KARVPGSLVLLAVGGATYTAWHALDAAAIARLVTAVGADGVDIDLELDNPACQSDGGARISCTGGYVWRSTIKALRAALP RPKVISLTGWSVAAYGEGPWAEARPTSQHTGELLALFRHPVSAEIDLVTIMAYNATAAYDPVEAYRAYRAVWAGPLSLGV LVPPDNGRQPDLTAAELTRLGQAIAADRKAGMMLYAFGIPPQPGQLSANDIVEQIARERPPVAP >Mature_303_residues PARADIPQRPLVAYVQSWEDGPAAHGRDSGLVGLPAAIDVAILSFVRPDAVYSGGEDLRPTGLGYAYGRAVLAEAIAERK ARVPGSLVLLAVGGATYTAWHALDAAAIARLVTAVGADGVDIDLELDNPACQSDGGARISCTGGYVWRSTIKALRAALPR PKVISLTGWSVAAYGEGPWAEARPTSQHTGELLALFRHPVSAEIDLVTIMAYNATAAYDPVEAYRAYRAVWAGPLSLGVL VPPDNGRQPDLTAAELTRLGQAIAADRKAGMMLYAFGIPPQPGQLSANDIVEQIARERPPVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31936; Mature: 31804
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARADIPQRPLVAYVQSWEDGPAAHGRDSGLVGLPAAIDVAILSFVRPDAVYSGGEDLR CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCHHCCCCCCCC PTGLGYAYGRAVLAEAIAERKARVPGSLVLLAVGGATYTAWHALDAAAIARLVTAVGADG CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC VDIDLELDNPACQSDGGARISCTGGYVWRSTIKALRAALPRPKVISLTGWSVAAYGEGPW CEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCC AEARPTSQHTGELLALFRHPVSAEIDLVTIMAYNATAAYDPVEAYRAYRAVWAGPLSLGV CCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE LVPPDNGRQPDLTAAELTRLGQAIAADRKAGMMLYAFGIPPQPGQLSANDIVEQIARERP EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC PVAP CCCC >Mature Secondary Structure PARADIPQRPLVAYVQSWEDGPAAHGRDSGLVGLPAAIDVAILSFVRPDAVYSGGEDLR CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCHHCCCCCCCC PTGLGYAYGRAVLAEAIAERKARVPGSLVLLAVGGATYTAWHALDAAAIARLVTAVGADG CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC VDIDLELDNPACQSDGGARISCTGGYVWRSTIKALRAALPRPKVISLTGWSVAAYGEGPW CEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCC AEARPTSQHTGELLALFRHPVSAEIDLVTIMAYNATAAYDPVEAYRAYRAVWAGPLSLGV CCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE LVPPDNGRQPDLTAAELTRLGQAIAADRKAGMMLYAFGIPPQPGQLSANDIVEQIARERP EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC PVAP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA