| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83595037
Identifier: 83595037
GI number: 83595037
Start: 4258788
End: 4259945
Strand: Reverse
Name: 83595037
Synonym: Rru_A3708
Alternate gene names: NA
Gene position: 4259945-4258788 (Counterclockwise)
Preceding gene: 83595038
Following gene: 83595035
Centisome position: 97.87
GC content: 63.82
Gene sequence:
>1158_bases ATGGCACCGCACGACCTCCCTATTCCTAGGCTTAGCGGAAGCAGCCCATCACCAAGCGACTCTAAGCGCAACGTTGGCAT TGATCGCATCCGCATCGCCCTGACGACGCTGGTGATCTTGCATCACACCGCGATCGTCTATGGCGGTTCGGACGGATGGT TCTGGCGTCAGGAGCCCAATGCGTCGAATGTCTTCTTCGTGATTTTCAACACCATCAACCAAGCCTACTTCATGGGCTTG TTCTTTTTGCTCGCGGGCTATTACACGCCTCGGTCCTATGAGCGAAAGGGCGCCGTGCGCTATCTGGCTGATCGTCTGTT GCGGCTCGGAGCGCCGCTTCTGGCGTTCTTTTTTGTGTTGTATCCGCTGACCGTCGCCATTGCGCGAACCAGCCAAGGAC ATCCGTTCTGGCGCGGATGGGGAGAGATGATCGTAGCGCGCGCATTCGGGCCGGGGCCACTGTGGTTTGCGGAAGCGTTG TTGATATGCGCGGTGGGCTATGCGGCTTGGCGGGGAGTTCGGCGCGGGCATGAAGCGCCCACTTCCCCGCTCCCCGCGCT GCCTTCGACCCGCGCGCTGGCATTGACCGCCGTCGGGCTGGGCGTCGCCTCTTTTGCCGTGCGCCTCGCCGTGCCTGTGG GCAAGGACGTGCTGTGGCTACAACTCGGCTACGTCCCTTGCTACCTCTATCTGTTCGCCGCCGGATGCAGGACGGCGCGC TCGCGGCTGTTGGAGCGCATTACGGCGCAAGACGCGCGACCGTGGATGATTGTCTCGGCCATCGCGATTTTCCTGCTGCC GATCGTGATGCTGACACGCAGCGACGCGGGAGCGTTTGAAGGCGGGTGGACTCTCAACGCGTTCTTCTATGCGCTTTGGG ACCCCTTTGTCGCGTGGGGAGTGATTCTTGGCCTGCTGTGGGCCGCGCGACGAAGGGAGGCGCAGCGGCGGACGCCGCTG ACGGACTGGCTTGGGCGCGGCGCGTTTGGCGCGTTCATCGTCCACCCGCCCGTGGTCGTGGCGTTGAGCGTCTGGGCGGC GACCTGGAGCACATCGCCGTGGGCGAAATTCGCCCTCGTTGGCGCGGGGGCGTGCGCGGGGAGCTACGCGATCTCGGCGG CTTTACGCCTCGTTCCCGGAGTGCGGCGCGTAATCTAA
Upstream 100 bases:
>100_bases CCACACCTGGGCCTACTCTAAGCGAGCCAGATAAAACCGCGTTCAATGAAAACCCTTTAACATAGAAATTTTTATCCAAA TTCAATAAGTTAGAGCAGCG
Downstream 100 bases:
>100_bases AAAACGGCGCTAACGGCTTTTCTGGAAGAACCGGCGACCACGGATCTCGGCCGGCCCGACCTTACAAGGGAACCCCACGC ATCAGGCGCGGCGGCTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MAPHDLPIPRLSGSSPSPSDSKRNVGIDRIRIALTTLVILHHTAIVYGGSDGWFWRQEPNASNVFFVIFNTINQAYFMGL FFLLAGYYTPRSYERKGAVRYLADRLLRLGAPLLAFFFVLYPLTVAIARTSQGHPFWRGWGEMIVARAFGPGPLWFAEAL LICAVGYAAWRGVRRGHEAPTSPLPALPSTRALALTAVGLGVASFAVRLAVPVGKDVLWLQLGYVPCYLYLFAAGCRTAR SRLLERITAQDARPWMIVSAIAIFLLPIVMLTRSDAGAFEGGWTLNAFFYALWDPFVAWGVILGLLWAARRREAQRRTPL TDWLGRGAFGAFIVHPPVVVALSVWAATWSTSPWAKFALVGAGACAGSYAISAALRLVPGVRRVI
Sequences:
>Translated_385_residues MAPHDLPIPRLSGSSPSPSDSKRNVGIDRIRIALTTLVILHHTAIVYGGSDGWFWRQEPNASNVFFVIFNTINQAYFMGL FFLLAGYYTPRSYERKGAVRYLADRLLRLGAPLLAFFFVLYPLTVAIARTSQGHPFWRGWGEMIVARAFGPGPLWFAEAL LICAVGYAAWRGVRRGHEAPTSPLPALPSTRALALTAVGLGVASFAVRLAVPVGKDVLWLQLGYVPCYLYLFAAGCRTAR SRLLERITAQDARPWMIVSAIAIFLLPIVMLTRSDAGAFEGGWTLNAFFYALWDPFVAWGVILGLLWAARRREAQRRTPL TDWLGRGAFGAFIVHPPVVVALSVWAATWSTSPWAKFALVGAGACAGSYAISAALRLVPGVRRVI >Mature_384_residues APHDLPIPRLSGSSPSPSDSKRNVGIDRIRIALTTLVILHHTAIVYGGSDGWFWRQEPNASNVFFVIFNTINQAYFMGLF FLLAGYYTPRSYERKGAVRYLADRLLRLGAPLLAFFFVLYPLTVAIARTSQGHPFWRGWGEMIVARAFGPGPLWFAEALL ICAVGYAAWRGVRRGHEAPTSPLPALPSTRALALTAVGLGVASFAVRLAVPVGKDVLWLQLGYVPCYLYLFAAGCRTARS RLLERITAQDARPWMIVSAIAIFLLPIVMLTRSDAGAFEGGWTLNAFFYALWDPFVAWGVILGLLWAARRREAQRRTPLT DWLGRGAFGAFIVHPPVVVALSVWAATWSTSPWAKFALVGAGACAGSYAISAALRLVPGVRRVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42264; Mature: 42133
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPHDLPIPRLSGSSPSPSDSKRNVGIDRIRIALTTLVILHHTAIVYGGSDGWFWRQEPN CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCCC ASNVFFVIFNTINQAYFMGLFFLLAGYYTPRSYERKGAVRYLADRLLRLGAPLLAFFFVL CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH YPLTVAIARTSQGHPFWRGWGEMIVARAFGPGPLWFAEALLICAVGYAAWRGVRRGHEAP HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC TSPLPALPSTRALALTAVGLGVASFAVRLAVPVGKDVLWLQLGYVPCYLYLFAAGCRTAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH SRLLERITAQDARPWMIVSAIAIFLLPIVMLTRSDAGAFEGGWTLNAFFYALWDPFVAWG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH VILGLLWAARRREAQRRTPLTDWLGRGAFGAFIVHPPVVVALSVWAATWSTSPWAKFALV HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHEE GAGACAGSYAISAALRLVPGVRRVI ECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure APHDLPIPRLSGSSPSPSDSKRNVGIDRIRIALTTLVILHHTAIVYGGSDGWFWRQEPN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCCC ASNVFFVIFNTINQAYFMGLFFLLAGYYTPRSYERKGAVRYLADRLLRLGAPLLAFFFVL CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH YPLTVAIARTSQGHPFWRGWGEMIVARAFGPGPLWFAEALLICAVGYAAWRGVRRGHEAP HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC TSPLPALPSTRALALTAVGLGVASFAVRLAVPVGKDVLWLQLGYVPCYLYLFAAGCRTAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH SRLLERITAQDARPWMIVSAIAIFLLPIVMLTRSDAGAFEGGWTLNAFFYALWDPFVAWG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH VILGLLWAARRREAQRRTPLTDWLGRGAFGAFIVHPPVVVALSVWAATWSTSPWAKFALV HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHEE GAGACAGSYAISAALRLVPGVRRVI ECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA