| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83595018
Identifier: 83595018
GI number: 83595018
Start: 4235812
End: 4236264
Strand: Reverse
Name: 83595018
Synonym: Rru_A3689
Alternate gene names: NA
Gene position: 4236264-4235812 (Counterclockwise)
Preceding gene: 83595019
Following gene: 83595017
Centisome position: 97.32
GC content: 71.96
Gene sequence:
>453_bases GTGACCCTTTCTTCGACCACCGCCCCCCTTGACCAGCCGATCCCCCAGGCCACCGCCGACGCCTTTTGCGCGCTGACCGG CGATGACCAGTGGATCCACATCGACCCCGCCCGCGCCGAGGCCGAGGGGCTGGCCGGCGGCGATACCGTCTTGCCCGGCG CCCTGCTGCTCAGTCTGGCGGTTGGCGGCCTGGGCAAGGCCCTGGGCTATCCCGAGGGCACGCGCAGCTGGCAGCGTTCC TATGAGCGGGTGCGCTTCCTGCGCCCGGCGCCGGTGGGCAGCCGCCTGCGCCTGGAAGCCCGCGAGAGCCGCCGCCGCCC CGCCGGCACCGGGCGCGAGGTCGTTGTCGCCAATGTCAGCCTTTACAGCGATCTGGTCGAGGCCGGCCCGGTGATGGAAG GCTGCTTCACCAGCCTGCTTGAGGTCGCGGTCCAGCCAGACACCGCGGAATGA
Upstream 100 bases:
>100_bases CCGAAATCAACGTCACCTCTCCCACGGGCATCCAGGAAATCGACCGTTTCGACGGGGTTTGCCTGGAAGCCGACCTTTGG AATGCGATCGAGGCCAAACT
Downstream 100 bases:
>100_bases CCCAGACCATCGTCTTCACCGGCGTGCGGGTCGAGGCCGAGGACGGCCGGCCGATCCTGCACGATCTGACCCTGACCCTG AAGGAAGCCCGGGTCGGGAT
Product: MaoC-like dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTLSSTTAPLDQPIPQATADAFCALTGDDQWIHIDPARAEAEGLAGGDTVLPGALLLSLAVGGLGKALGYPEGTRSWQRS YERVRFLRPAPVGSRLRLEARESRRRPAGTGREVVVANVSLYSDLVEAGPVMEGCFTSLLEVAVQPDTAE
Sequences:
>Translated_150_residues MTLSSTTAPLDQPIPQATADAFCALTGDDQWIHIDPARAEAEGLAGGDTVLPGALLLSLAVGGLGKALGYPEGTRSWQRS YERVRFLRPAPVGSRLRLEARESRRRPAGTGREVVVANVSLYSDLVEAGPVMEGCFTSLLEVAVQPDTAE >Mature_149_residues TLSSTTAPLDQPIPQATADAFCALTGDDQWIHIDPARAEAEGLAGGDTVLPGALLLSLAVGGLGKALGYPEGTRSWQRSY ERVRFLRPAPVGSRLRLEARESRRRPAGTGREVVVANVSLYSDLVEAGPVMEGCFTSLLEVAVQPDTAE
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15904; Mature: 15773
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSSTTAPLDQPIPQATADAFCALTGDDQWIHIDPARAEAEGLAGGDTVLPGALLLSLA CCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHH VGGLGKALGYPEGTRSWQRSYERVRFLRPAPVGSRLRLEARESRRRPAGTGREVVVANVS HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECHHHCCCCCCCCCEEEEEHHH LYSDLVEAGPVMEGCFTSLLEVAVQPDTAE HHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLSSTTAPLDQPIPQATADAFCALTGDDQWIHIDPARAEAEGLAGGDTVLPGALLLSLA CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHH VGGLGKALGYPEGTRSWQRSYERVRFLRPAPVGSRLRLEARESRRRPAGTGREVVVANVS HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECHHHCCCCCCCCCEEEEEHHH LYSDLVEAGPVMEGCFTSLLEVAVQPDTAE HHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA