| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is tagO [H]
Identifier: 83594986
GI number: 83594986
Start: 4198021
End: 4199034
Strand: Reverse
Name: tagO [H]
Synonym: Rru_A3657
Alternate gene names: 83594986
Gene position: 4199034-4198021 (Counterclockwise)
Preceding gene: 83594987
Following gene: 83594985
Centisome position: 96.47
GC content: 71.4
Gene sequence:
>1014_bases ATGGTCGGGCTGGCGCTGCTGGCGGTCCCGTTAAGCGCGGTGGCCACCGGTTGGCTGCGCCGTGTTCTGCAGGCCCGCAA GGTTCTTGACACCCCCAACGCCCGCTCCAGCCATTCCGTGCCGACGCCGCGCGGCGGCGGGCTGGCGGTTCTCGCCGTCG CGCTGGCGCTCTGCGCTGTTGGCTGGCTGGCCGGCGCGCCGGTCGGCTGGCGGCCCTGGGCGCTGCTCGCCGGAGCCATC GTCCTCGCCGCCCTGTCCTTCGCCGATGACCTGGGCGGACTGGGGGCGGGCAAACGCTTCGCCGTTCAGGCGCTGTGCGT CGGCCTGGGGCTAGCCGCCCTCCCGGCCGGCGCGCTTGGCCTGGGTGGGCTGCTGCCCGAGGTCCTTGGCGGGCCGCTGG TCTTCCTGGGCTGGCTATGGTTCGTCAATCTCTATAATTTCATGGATGGCATCGACGGGCTGACCGGGGTGGAAACCCTC TCGTTGGGCCTGGGAACGGCTTTGGTCGCCGGCTCTGCCGGGATGGCGATGGACCAGATGATGGCCGGGCCGATCCTGGC CGGGGCGGCGCTCGGCTTTTTGTGGTGGAACTGGCATCCGGCGCGCATCTTCCTCGGCGATGTCGGCAGCGTGCCGCTGG GCTATCTGCTCGGCGCCCTGCTGGCGGCTTTGGCGGCCGAGGGCCATTTGGCGGCGGCGCTGCTGCTACCGGGCTATTAT CTGGCCGACGCCACCTTGACCCTTGGCCGGCGGGCGCTGCGCGGGGCCAAGGTGTGGCAGGCCCACCGCGAGCATTTCTA CCAGCGCGCCACCCAGGGCGGCTGGCCCCACGACCGGGTCAGCCTGTGGGTCGGCGGCTTGAACGGCGTTCTGGCCGGTC TTGCCCTGTGGTCGACCTTTGATGGCTATGCCCTGCCGGCCCTGGCCGCGGGCATCGTGGCGATCGCCCTGGTGCTGGGA ACCTTCGCCCGCGCCGGACGCGGCCGGACGCAAGCAAGGGAATACGAGGCGTGA
Upstream 100 bases:
>100_bases CGGCAGACGGCGGCGGTCTATCGCGCCCTGTTGCCTTGACCGTTGCCCCGACCGGCGTTCCGGGCCTATACCCCTGGCGA TGGACAATGGCATGGCATGG
Downstream 100 bases:
>100_bases GAATGCGGTCGCTGTTTACCCCGATGCCGCCCCGGGCGCGCATCGTCTTCGCCCACGACGTGGTGATGGCGGCGCTGTCC TTCGTGATCTCGCTGTATCT
Product: glycosyl transferase family protein
Products: Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine; UMP [C]
Alternate protein names: UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MVGLALLAVPLSAVATGWLRRVLQARKVLDTPNARSSHSVPTPRGGGLAVLAVALALCAVGWLAGAPVGWRPWALLAGAI VLAALSFADDLGGLGAGKRFAVQALCVGLGLAALPAGALGLGGLLPEVLGGPLVFLGWLWFVNLYNFMDGIDGLTGVETL SLGLGTALVAGSAGMAMDQMMAGPILAGAALGFLWWNWHPARIFLGDVGSVPLGYLLGALLAALAAEGHLAAALLLPGYY LADATLTLGRRALRGAKVWQAHREHFYQRATQGGWPHDRVSLWVGGLNGVLAGLALWSTFDGYALPALAAGIVAIALVLG TFARAGRGRTQAREYEA
Sequences:
>Translated_337_residues MVGLALLAVPLSAVATGWLRRVLQARKVLDTPNARSSHSVPTPRGGGLAVLAVALALCAVGWLAGAPVGWRPWALLAGAI VLAALSFADDLGGLGAGKRFAVQALCVGLGLAALPAGALGLGGLLPEVLGGPLVFLGWLWFVNLYNFMDGIDGLTGVETL SLGLGTALVAGSAGMAMDQMMAGPILAGAALGFLWWNWHPARIFLGDVGSVPLGYLLGALLAALAAEGHLAAALLLPGYY LADATLTLGRRALRGAKVWQAHREHFYQRATQGGWPHDRVSLWVGGLNGVLAGLALWSTFDGYALPALAAGIVAIALVLG TFARAGRGRTQAREYEA >Mature_337_residues MVGLALLAVPLSAVATGWLRRVLQARKVLDTPNARSSHSVPTPRGGGLAVLAVALALCAVGWLAGAPVGWRPWALLAGAI VLAALSFADDLGGLGAGKRFAVQALCVGLGLAALPAGALGLGGLLPEVLGGPLVFLGWLWFVNLYNFMDGIDGLTGVETL SLGLGTALVAGSAGMAMDQMMAGPILAGAALGFLWWNWHPARIFLGDVGSVPLGYLLGALLAALAAEGHLAAALLLPGYY LADATLTLGRRALRGAKVWQAHREHFYQRATQGGWPHDRVSLWVGGLNGVLAGLALWSTFDGYALPALAAGIVAIALVLG TFARAGRGRTQAREYEA
Specific function: Catalyzes the formation of undecaprenyl-PP-N- acetylglucosamine. Involved in the synthesis of anionic cell-wall polymers as it mediates the initiation of the linkage unit formation that appears to be common to the two types of teichoic acids attached to t
COG id: COG0472
COG function: function code M; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1786275, Length=307, Percent_Identity=28.9902280130293, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000715 - InterPro: IPR018480 [H]
Pfam domain/function: PF00953 Glycos_transf_4 [H]
EC number: 2.7.8.13 [C]
Molecular weight: Translated: 34630; Mature: 34630
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLALLAVPLSAVATGWLRRVLQARKVLDTPNARSSHSVPTPRGGGLAVLAVALALCAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GWLAGAPVGWRPWALLAGAIVLAALSFADDLGGLGAGKRFAVQALCVGLGLAALPAGALG HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH LGGLLPEVLGGPLVFLGWLWFVNLYNFMDGIDGLTGVETLSLGLGTALVAGSAGMAMDQM HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH MAGPILAGAALGFLWWNWHPARIFLGDVGSVPLGYLLGALLAALAAEGHLAAALLLPGYY HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHH LADATLTLGRRALRGAKVWQAHREHFYQRATQGGWPHDRVSLWVGGLNGVLAGLALWSTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCHHHHHHHHHHHHHC DGYALPALAAGIVAIALVLGTFARAGRGRTQAREYEA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure MVGLALLAVPLSAVATGWLRRVLQARKVLDTPNARSSHSVPTPRGGGLAVLAVALALCAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GWLAGAPVGWRPWALLAGAIVLAALSFADDLGGLGAGKRFAVQALCVGLGLAALPAGALG HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH LGGLLPEVLGGPLVFLGWLWFVNLYNFMDGIDGLTGVETLSLGLGTALVAGSAGMAMDQM HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH MAGPILAGAALGFLWWNWHPARIFLGDVGSVPLGYLLGALLAALAAEGHLAAALLLPGYY HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHH LADATLTLGRRALRGAKVWQAHREHFYQRATQGGWPHDRVSLWVGGLNGVLAGLALWSTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCHHHHHHHHHHHHHC DGYALPALAAGIVAIALVLGTFARAGRGRTQAREYEA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Undecaprenyl phosphate; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine [C]
Specific reaction: Undecaprenyl phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine --> Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UMP [C]
General reaction: Substituted phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12101296; 9384377 [H]