| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594961
Identifier: 83594961
GI number: 83594961
Start: 4173715
End: 4174320
Strand: Reverse
Name: 83594961
Synonym: Rru_A3632
Alternate gene names: NA
Gene position: 4174320-4173715 (Counterclockwise)
Preceding gene: 83594962
Following gene: 83594960
Centisome position: 95.9
GC content: 67.0
Gene sequence:
>606_bases ATGACCTCCTGGCATCACCCCACCCTGCCGCAGCCTGTTTCCCCTGCGCGATCGAAGCGAACCGCCCGCGGGGCGGCCAC GGTGCTCGCCGTCGCCTTCACCCTTGGGCTGACGGCTTGCGAAGGCTCGCAGGCCGTCTTCCCCGAGCAGGACAAGGCCA CCAAACAGCGCGTCTACCGCGATCCGTCCAAGCCCGATGAAACCCCGGGGCTGTTCGGGCCGAGCGGCCTGAACATCCTG GGCGGCAAAGGCGGTTCGTCCGAGCCGGGCGCCAGCGGCGTCGGGGTCAATAGTTTCCTGTGGCGGGCCTCGCTCGACAC CATGGGCTTCATGCCGCTGACCTCGGCCGATCCCTTCGGCGGGGTGATCATCACCGATTGGTACGCCCCCCCCGAAAGCC CCAACGAACGCTTCAAGGCCAATGTCTATATCCTGTCCAAGGGCCTGCGCGCCGATGGCGTGAAGGTCTCGGTGTTCAAG CAGCAGCGCAGCGCCGGGGGAACCTGGAGCGACGCGCCGGTGGCGACCGAGGTGGCGACCGATATGGAAAACGCCATCCT GACCCGGGCCCGCCAATTGCGGCTTTCGGTGATGAACGCCCAGTAA
Upstream 100 bases:
>100_bases TGGAAAAAGCCGGCGGCCACCGGTATGTTTGTCGCCGCTTTCGGCGTGACCGGCACCCCGCCCCTTCGCCCTTCCGCCTC ATCGACGGGTAACAACAACC
Downstream 100 bases:
>100_bases CCCTTTCCCCGCGGGGCGCGCGCGCCTCCGCGCCGGCCTCCCCGCTGTCCGGCCCGCCCCGCTTCCTGTTTGGCTAAAGA AAGACTGTCGAGAAATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTSWHHPTLPQPVSPARSKRTARGAATVLAVAFTLGLTACEGSQAVFPEQDKATKQRVYRDPSKPDETPGLFGPSGLNIL GGKGGSSEPGASGVGVNSFLWRASLDTMGFMPLTSADPFGGVIITDWYAPPESPNERFKANVYILSKGLRADGVKVSVFK QQRSAGGTWSDAPVATEVATDMENAILTRARQLRLSVMNAQ
Sequences:
>Translated_201_residues MTSWHHPTLPQPVSPARSKRTARGAATVLAVAFTLGLTACEGSQAVFPEQDKATKQRVYRDPSKPDETPGLFGPSGLNIL GGKGGSSEPGASGVGVNSFLWRASLDTMGFMPLTSADPFGGVIITDWYAPPESPNERFKANVYILSKGLRADGVKVSVFK QQRSAGGTWSDAPVATEVATDMENAILTRARQLRLSVMNAQ >Mature_200_residues TSWHHPTLPQPVSPARSKRTARGAATVLAVAFTLGLTACEGSQAVFPEQDKATKQRVYRDPSKPDETPGLFGPSGLNILG GKGGSSEPGASGVGVNSFLWRASLDTMGFMPLTSADPFGGVIITDWYAPPESPNERFKANVYILSKGLRADGVKVSVFKQ QRSAGGTWSDAPVATEVATDMENAILTRARQLRLSVMNAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021959 [H]
Pfam domain/function: PF12100 DUF3576 [H]
EC number: NA
Molecular weight: Translated: 21362; Mature: 21231
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSWHHPTLPQPVSPARSKRTARGAATVLAVAFTLGLTACEGSQAVFPEQDKATKQRVYR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC DPSKPDETPGLFGPSGLNILGGKGGSSEPGASGVGVNSFLWRASLDTMGFMPLTSADPFG CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCC GVIITDWYAPPESPNERFKANVYILSKGLRADGVKVSVFKQQRSAGGTWSDAPVATEVAT CEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHH DMENAILTRARQLRLSVMNAQ HHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure TSWHHPTLPQPVSPARSKRTARGAATVLAVAFTLGLTACEGSQAVFPEQDKATKQRVYR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC DPSKPDETPGLFGPSGLNILGGKGGSSEPGASGVGVNSFLWRASLDTMGFMPLTSADPFG CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCC GVIITDWYAPPESPNERFKANVYILSKGLRADGVKVSVFKQQRSAGGTWSDAPVATEVAT CEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHH DMENAILTRARQLRLSVMNAQ HHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]