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The map label for this gene is 83594927

Identifier: 83594927

GI number: 83594927

Start: 4139711

End: 4140181

Strand: Direct

Name: 83594927

Synonym: Rru_A3598

Alternate gene names: NA

Gene position: 4139711-4140181 (Clockwise)

Preceding gene: 83594919

Following gene: 83594928

Centisome position: 95.1

GC content: 58.6

Gene sequence:

>471_bases
GTGAGAAGGTCAAAAACCGAAGAGACCCTGGGAGATGGCATCAATAAGTCGCCTGATCCCGTTGATGTGCATGTTGGTCG
CCGTCTGCGACTGCGTCGAACCCTGCTTGGAATGAGTCAGGAACAGCTCGCCAACGCCGTTGGCGTGACCTTCCAGCAGA
TCCAGAAGTACGAGCGCGGCAGCAATCGTGTCAGCGCCAGCCGTTTATACGATATTTCGAAGGTTCTGGGCGTCCCGGTG
GCCTTTTTCTTCGAAGATATCGGCGACGAAGTGACTTCGGCGCGACTGGCGCCGATTGTTCCCGACATTACCGGCTCCGG
CCTGTCCGAGCCGGCGATCCCCGCCTACGAACAGGATCCTTTGCAGAAGAACGAGACGCTCGAATTGATCCGCGCCTATT
GGCGCCTGCCCACCGATACGGTGCGCAAGCGGGCCCTTGATCTGCTTAAAAGCCTGTCCGGGCGGGACTAA

Upstream 100 bases:

>100_bases
CGCCCAGCCTTTGAAAGAACTGGAGTCGTGAACCCGGACACGCTAAGGTTTTAAAACCGGGTTCACATGGTCAAACCCGT
CTAGATCATGGGGCAAGAAC

Downstream 100 bases:

>100_bases
CCCGGTCTTGCCGGCCGGCCCGGGCTCCCAAGCCCCGGTCCGGCCGATAAGCCGCCGCACCCCCCCCCGGTGCCGCCCCG
GCCCGCCACCGTTACCCCCC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRRSKTEETLGDGINKSPDPVDVHVGRRLRLRRTLLGMSQEQLANAVGVTFQQIQKYERGSNRVSASRLYDISKVLGVPV
AFFFEDIGDEVTSARLAPIVPDITGSGLSEPAIPAYEQDPLQKNETLELIRAYWRLPTDTVRKRALDLLKSLSGRD

Sequences:

>Translated_156_residues
MRRSKTEETLGDGINKSPDPVDVHVGRRLRLRRTLLGMSQEQLANAVGVTFQQIQKYERGSNRVSASRLYDISKVLGVPV
AFFFEDIGDEVTSARLAPIVPDITGSGLSEPAIPAYEQDPLQKNETLELIRAYWRLPTDTVRKRALDLLKSLSGRD
>Mature_156_residues
MRRSKTEETLGDGINKSPDPVDVHVGRRLRLRRTLLGMSQEQLANAVGVTFQQIQKYERGSNRVSASRLYDISKVLGVPV
AFFFEDIGDEVTSARLAPIVPDITGSGLSEPAIPAYEQDPLQKNETLELIRAYWRLPTDTVRKRALDLLKSLSGRD

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 17451; Mature: 17451

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSKTEETLGDGINKSPDPVDVHVGRRLRLRRTLLGMSQEQLANAVGVTFQQIQKYERG
CCCCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
SNRVSASRLYDISKVLGVPVAFFFEDIGDEVTSARLAPIVPDITGSGLSEPAIPAYEQDP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
LQKNETLELIRAYWRLPTDTVRKRALDLLKSLSGRD
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRSKTEETLGDGINKSPDPVDVHVGRRLRLRRTLLGMSQEQLANAVGVTFQQIQKYERG
CCCCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
SNRVSASRLYDISKVLGVPVAFFFEDIGDEVTSARLAPIVPDITGSGLSEPAIPAYEQDP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
LQKNETLELIRAYWRLPTDTVRKRALDLLKSLSGRD
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]