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The map label for this gene is ybhL [C]

Identifier: 83594887

GI number: 83594887

Start: 4097786

End: 4098538

Strand: Direct

Name: ybhL [C]

Synonym: Rru_A3558

Alternate gene names: 83594887

Gene position: 4097786-4098538 (Clockwise)

Preceding gene: 83594886

Following gene: 83594891

Centisome position: 94.14

GC content: 60.56

Gene sequence:

>753_bases
ATGGTCTACGACGTCAGACGTGAGCATCTGTCACGCGGCCAGGCCGGGGTCGCGACGGACGCCCAGGTGGATGCCGGCCT
TCGTACTTACATGCTGCGTGTGTACAACTACCTGGCATCGGGGCTCGCCTTGTCGGGCGTCATCGCCATGTCGGTGGTCT
ACACGCCGCTCAGCGCCGCCTTTTATCAGGTCTCGCCCGAAGGGCAGCTGATGGGCCTGAACATGCTGGGCATGATCGCG
GTCTTCGCGCCGCTCGGCCTGCTGTTCCTGGCGATGTTCGCCGCTCAGAAAATGAGCGCCGCGGCCTCGCAGATGTTCTA
TTGGGCCTTCGTCGCCCTGCAGGGCGTCAGCCTGTCGACCCTTCTGCTGGTTTACACCGGCGAAAGCATCGTGCGGGTGT
TCTTCATCACCGCCGGTACCTTCGCCGCGCTCAGCCTTTATGGCTATACGACCAAGCGCGACCTTGCCGGCTTTGGCAAG
TTCCTGTTCATGGGGTTGATCGGCATGCTTCTGGCTGCCGTGGTCAATATCTTCCTGGGCAGCAGCATGCTGCAGTTCGT
GGTTTCCGCGGTTGGCGTTCTGGTGTTCTCGGGGTTGATCGCCTATGACACCCAGGCCATCAAGGAGCGTTATTACGACG
GTCTTGGCCGCGACAGCGAAACCAAGATGGCGGTGTTCAGCGCTCTCGCCCTCTATCTGAACTTCATCAACCTGTTGCAG
TTCCTGCTCTACTTCCTGGGTAACCGCGAGTAG

Upstream 100 bases:

>100_bases
GCCATATTAAGCTGACAGTTCGCCCGCCATCGCCCCATCGCCGATGGCACCCGCGACAAGACCGCAGACGATGGAAAAAT
AGACGGTGGATGAGGGAATT

Downstream 100 bases:

>100_bases
TCGGATCGGCGACCACCTTTCAAGGATCAGGCCCGGGACCCTCCCGGGCCTTTTTCTTTGGTCGCTTGGCTCACCGGCCG
CGCAGATAGGCGACCGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MVYDVRREHLSRGQAGVATDAQVDAGLRTYMLRVYNYLASGLALSGVIAMSVVYTPLSAAFYQVSPEGQLMGLNMLGMIA
VFAPLGLLFLAMFAAQKMSAAASQMFYWAFVALQGVSLSTLLLVYTGESIVRVFFITAGTFAALSLYGYTTKRDLAGFGK
FLFMGLIGMLLAAVVNIFLGSSMLQFVVSAVGVLVFSGLIAYDTQAIKERYYDGLGRDSETKMAVFSALALYLNFINLLQ
FLLYFLGNRE

Sequences:

>Translated_250_residues
MVYDVRREHLSRGQAGVATDAQVDAGLRTYMLRVYNYLASGLALSGVIAMSVVYTPLSAAFYQVSPEGQLMGLNMLGMIA
VFAPLGLLFLAMFAAQKMSAAASQMFYWAFVALQGVSLSTLLLVYTGESIVRVFFITAGTFAALSLYGYTTKRDLAGFGK
FLFMGLIGMLLAAVVNIFLGSSMLQFVVSAVGVLVFSGLIAYDTQAIKERYYDGLGRDSETKMAVFSALALYLNFINLLQ
FLLYFLGNRE
>Mature_250_residues
MVYDVRREHLSRGQAGVATDAQVDAGLRTYMLRVYNYLASGLALSGVIAMSVVYTPLSAAFYQVSPEGQLMGLNMLGMIA
VFAPLGLLFLAMFAAQKMSAAASQMFYWAFVALQGVSLSTLLLVYTGESIVRVFFITAGTFAALSLYGYTTKRDLAGFGK
FLFMGLIGMLLAAVVNIFLGSSMLQFVVSAVGVLVFSGLIAYDTQAIKERYYDGLGRDSETKMAVFSALALYLNFINLLQ
FLLYFLGNRE

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=231, Percent_Identity=43.2900432900433, Blast_Score=161, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 27239; Mature: 27239

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCC
>Mature Secondary Structure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HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]