Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is bluB [H]

Identifier: 83594865

GI number: 83594865

Start: 4067377

End: 4068012

Strand: Direct

Name: bluB [H]

Synonym: Rru_A3536

Alternate gene names: 83594865

Gene position: 4067377-4068012 (Clockwise)

Preceding gene: 83594859

Following gene: 83594866

Centisome position: 93.44

GC content: 69.97

Gene sequence:

>636_bases
ATGCGCACCGGTCCCCTTTTCGATCCCAGTTTCCGCGACGGCCTCGACGCCCTGTTCCAGTGGCGGCGCGACGTCAGGCA
TTTCCGCAAGGACCCGATCGACGAGGAGACGGTGGCAAGGCTGCTCGCCTGCGCCGATCTGGCGCCCAGCGTCGGCAACA
GCCAGCCCTGGCGCTTCGTGCGCGTCGACGATGGCGCCCGACGCGGGGTGATCATCGATGACTTCACCCGCTGCAACGCC
GCCGCCCGCGCCCTGCAGCCCGAAGAGCGCCAGGACGCCTATGCCCGGCTCAAGCTCGAAGGCCTGCGCGAGGCGCCGTT
GCAGCTTGCGGTGTTCTGCGACGAGGCGACCGACCAGGGCCACGGCCTGGGTCAGGCGACCATGCCCGAAACCCGGCGCT
ATTCGGTGGTGATGGCGATCCATACCCTGTGGCTGGCGGCGCGCGCCAGGGGCCTGGGGGTGGGCTGGGTGTCGGTGCTT
GATCCCCAAACCGTCACCGCCGCCCTGGACGTGCCCGCCGAGTGGGCTTTCGTGGCCTATCTGTGCATCGGCTGGCCGCG
CGAGGAACATCCGATCCCCGAACTCGAACGCCTGGGCTGGCAGTCCCGCCGCCCCCATCCGGTGGTGCGGCGTTAA

Upstream 100 bases:

>100_bases
CGCCTCGAGTCCTGGGAAAGGGATCGGCGCGGCGTAGACGATTCCCCCCCATCGGTCAAGCCTCTGGAATTCTGCAGGCC
TTACGGGTAAGTTTCGGCCC

Downstream 100 bases:

>100_bases
GGCCCTTCAGAGGGCAAATCCCGAGGGTCTGGAATGGGTAATTTCCGGCCTACAGGCTGTTTCAGAGCGACGTATCGTTA
TCTTTTCTGGCGTGGCTGTC

Product: cob(II)yrinic acid a,c-diamide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRTGPLFDPSFRDGLDALFQWRRDVRHFRKDPIDEETVARLLACADLAPSVGNSQPWRFVRVDDGARRGVIIDDFTRCNA
AARALQPEERQDAYARLKLEGLREAPLQLAVFCDEATDQGHGLGQATMPETRRYSVVMAIHTLWLAARARGLGVGWVSVL
DPQTVTAALDVPAEWAFVAYLCIGWPREEHPIPELERLGWQSRRPHPVVRR

Sequences:

>Translated_211_residues
MRTGPLFDPSFRDGLDALFQWRRDVRHFRKDPIDEETVARLLACADLAPSVGNSQPWRFVRVDDGARRGVIIDDFTRCNA
AARALQPEERQDAYARLKLEGLREAPLQLAVFCDEATDQGHGLGQATMPETRRYSVVMAIHTLWLAARARGLGVGWVSVL
DPQTVTAALDVPAEWAFVAYLCIGWPREEHPIPELERLGWQSRRPHPVVRR
>Mature_211_residues
MRTGPLFDPSFRDGLDALFQWRRDVRHFRKDPIDEETVARLLACADLAPSVGNSQPWRFVRVDDGARRGVIIDDFTRCNA
AARALQPEERQDAYARLKLEGLREAPLQLAVFCDEATDQGHGLGQATMPETRRYSVVMAIHTLWLAARARGLGVGWVSVL
DPQTVTAALDVPAEWAFVAYLCIGWPREEHPIPELERLGWQSRRPHPVVRR

Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012825
- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: =1.16.8.1 [H]

Molecular weight: Translated: 23904; Mature: 23904

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGPLFDPSFRDGLDALFQWRRDVRHFRKDPIDEETVARLLACADLAPSVGNSQPWRFV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
RVDDGARRGVIIDDFTRCNAAARALQPEERQDAYARLKLEGLREAPLQLAVFCDEATDQG
EECCCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
HGLGQATMPETRRYSVVMAIHTLWLAARARGLGVGWVSVLDPQTVTAALDVPAEWAFVAY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCHHHHHHHH
LCIGWPREEHPIPELERLGWQSRRPHPVVRR
HHHCCCCCCCCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTGPLFDPSFRDGLDALFQWRRDVRHFRKDPIDEETVARLLACADLAPSVGNSQPWRFV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
RVDDGARRGVIIDDFTRCNAAARALQPEERQDAYARLKLEGLREAPLQLAVFCDEATDQG
EECCCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
HGLGQATMPETRRYSVVMAIHTLWLAARARGLGVGWVSVLDPQTVTAALDVPAEWAFVAY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCHHHHHHHH
LCIGWPREEHPIPELERLGWQSRRPHPVVRR
HHHCCCCCCCCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635831; 9256491 [H]