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The map label for this gene is slyA [H]

Identifier: 83594811

GI number: 83594811

Start: 4006938

End: 4007453

Strand: Direct

Name: slyA [H]

Synonym: Rru_A3482

Alternate gene names: 83594811

Gene position: 4006938-4007453 (Clockwise)

Preceding gene: 83594810

Following gene: 83594812

Centisome position: 92.05

GC content: 67.44

Gene sequence:

>516_bases
ATGTCCAAGCGTCTTTCCGATTCCGTACCCGGCCTCAATGCCGCCTTCACCTTCGAGCTGTCGACGGCGGGGCGGAAAAT
GCGGCGGCTTTTCGATGGGGTGGTGCGCGAGCACGGCTTGACCCTGTCGCGGGCCCGCGCCTTGCTGTTGCTGTCGGGAC
ACCGCACCTGGACCCAGGCCGAACTGGCCGACGCCCTTGACGTCGAGCCGCCGTCGGTGGTGCGCCTGCTCGATGGCCTG
GAACGCCAGGGCATGATCAGCCGCAGCGCGGTGGAGGGCGATCGCCGGGCCAAGCATATCGAATTGACTGAGCCGGCCCG
GGTGCAGATCGGCCATATGGAAGAGATCAGCGCCACGGTCCGCAGCCGGCTGCTTGAGGGAATCGATCCCGAGGATCTGA
AGATCGCGCTGGCGGTGCTGCGTCAGGTGGTCAGCAACGCGGAAGCGGCCCGCTCCGATGACGCCGACCTCACCGCGCCC
CCGGCGGATGGCAAAGACCATGTCCGGGCCCAGTAG

Upstream 100 bases:

>100_bases
CCGGGCGGGCCCCGGGGAAAATCATCGCCCTGCCCTTGTGCCGGGGATCGATCGGGTTATATAGCTACACATCTGTTAGC
TAGCTATCTAGATCGGTGCC

Downstream 100 bases:

>100_bases
TCCTCCCGCTCCGCCCGCCGCTCCGCCGATGTCGACGGGGCGGTCAACCATTTATATCGCGGCTTCGGTCCTGCTCTGGA
TGACCCAGGGCCTCGGCATG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSKRLSDSVPGLNAAFTFELSTAGRKMRRLFDGVVREHGLTLSRARALLLLSGHRTWTQAELADALDVEPPSVVRLLDGL
ERQGMISRSAVEGDRRAKHIELTEPARVQIGHMEEISATVRSRLLEGIDPEDLKIALAVLRQVVSNAEAARSDDADLTAP
PADGKDHVRAQ

Sequences:

>Translated_171_residues
MSKRLSDSVPGLNAAFTFELSTAGRKMRRLFDGVVREHGLTLSRARALLLLSGHRTWTQAELADALDVEPPSVVRLLDGL
ERQGMISRSAVEGDRRAKHIELTEPARVQIGHMEEISATVRSRLLEGIDPEDLKIALAVLRQVVSNAEAARSDDADLTAP
PADGKDHVRAQ
>Mature_170_residues
SKRLSDSVPGLNAAFTFELSTAGRKMRRLFDGVVREHGLTLSRARALLLLSGHRTWTQAELADALDVEPPSVVRLLDGLE
RQGMISRSAVEGDRRAKHIELTEPARVQIGHMEEISATVRSRLLEGIDPEDLKIALAVLRQVVSNAEAARSDDADLTAPP
ADGKDHVRAQ

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=89, Percent_Identity=41.5730337078652, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18707; Mature: 18575

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLSDSVPGLNAAFTFELSTAGRKMRRLFDGVVREHGLTLSRARALLLLSGHRTWTQA
CCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH
ELADALDVEPPSVVRLLDGLERQGMISRSAVEGDRRAKHIELTEPARVQIGHMEEISATV
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCHHHCCEEECCCCCEEECCCHHHHHHHH
RSRLLEGIDPEDLKIALAVLRQVVSNAEAARSDDADLTAPPADGKDHVRAQ
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKRLSDSVPGLNAAFTFELSTAGRKMRRLFDGVVREHGLTLSRARALLLLSGHRTWTQA
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH
ELADALDVEPPSVVRLLDGLERQGMISRSAVEGDRRAKHIELTEPARVQIGHMEEISATV
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCHHHCCEEECCCCCEEECCCHHHHHHHH
RSRLLEGIDPEDLKIALAVLRQVVSNAEAARSDDADLTAPPADGKDHVRAQ
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA