| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yjeE [H]
Identifier: 83594767
GI number: 83594767
Start: 3960832
End: 3961329
Strand: Reverse
Name: yjeE [H]
Synonym: Rru_A3438
Alternate gene names: 83594767
Gene position: 3961329-3960832 (Counterclockwise)
Preceding gene: 83594769
Following gene: 83594766
Centisome position: 91.01
GC content: 69.48
Gene sequence:
>498_bases ATGAGCGAGCTGAGCCTTTTCCTGCCCGACCCCTCCGCCACCGATCGCCTGGGCGCCGCCCTGGCGCGGCTGGTGCGGGG CGGCGATGTTCTGGCACTGATCGGCGATCTGGGGGCGGGTAAATCCGCCCTGGCTCGCGCCCTGATCCGCGCCCTGACCA CGCCCGACGAAGAGGTGCCCAGCCCGACCTTCACCCTGGTCCAGACCTATGATCCGGCCGATGGGGCGAAGCCGATGATC TGGCATTTCGATCTGTATCGCCTGGACGACCCCGAGGAGGCCCTGGCCCTGGCCATCGAGGACGCCTTCGCCGAAGGCAT CAGCCTGATCGAATGGCCCGACCGCTTGGGCGCCCTGCTGCCCGCCGATCGCCTGGATATCCGCCTTGGCCCGGACGCCA GCGGAGCGGGGCGGATCGCCACTTTGAGCGAACGCGGCCGATGGGCCGGACGCTTGCCCGCCGAACCCGCCTTTTTTCTG GATCCGCCGCCGCGATGA
Upstream 100 bases:
>100_bases GGAAAAAACCATCGGCCGAGGTGTACGGCGAGCGACCCCACCGGCGCAAGCCCGCAGCGATCCGTTGCGGGCCGGCGGTT GGGCGAGTAAAACCGCCCCC
Downstream 100 bases:
>100_bases CCTCCCTTATACCGCTTCGTTCCCCCGCCCCTTCCGCCCCCGGCCTTTCCGCCAGCGACCGCGCCGCCGCCCTGGAGCGG TTGCTGGCCGCCAGCGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSELSLFLPDPSATDRLGAALARLVRGGDVLALIGDLGAGKSALARALIRALTTPDEEVPSPTFTLVQTYDPADGAKPMI WHFDLYRLDDPEEALALAIEDAFAEGISLIEWPDRLGALLPADRLDIRLGPDASGAGRIATLSERGRWAGRLPAEPAFFL DPPPR
Sequences:
>Translated_165_residues MSELSLFLPDPSATDRLGAALARLVRGGDVLALIGDLGAGKSALARALIRALTTPDEEVPSPTFTLVQTYDPADGAKPMI WHFDLYRLDDPEEALALAIEDAFAEGISLIEWPDRLGALLPADRLDIRLGPDASGAGRIATLSERGRWAGRLPAEPAFFL DPPPR >Mature_164_residues SELSLFLPDPSATDRLGAALARLVRGGDVLALIGDLGAGKSALARALIRALTTPDEEVPSPTFTLVQTYDPADGAKPMIW HFDLYRLDDPEEALALAIEDAFAEGISLIEWPDRLGALLPADRLDIRLGPDASGAGRIATLSERGRWAGRLPAEPAFFLD PPPR
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=142, Percent_Identity=40.8450704225352, Blast_Score=96, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17667; Mature: 17536
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELSLFLPDPSATDRLGAALARLVRGGDVLALIGDLGAGKSALARALIRALTTPDEEVP CCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC SPTFTLVQTYDPADGAKPMIWHFDLYRLDDPEEALALAIEDAFAEGISLIEWPDRLGALL CCEEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECHHHHCCCC PADRLDIRLGPDASGAGRIATLSERGRWAGRLPAEPAFFLDPPPR CCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure SELSLFLPDPSATDRLGAALARLVRGGDVLALIGDLGAGKSALARALIRALTTPDEEVP CCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC SPTFTLVQTYDPADGAKPMIWHFDLYRLDDPEEALALAIEDAFAEGISLIEWPDRLGALL CCEEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECHHHHCCCC PADRLDIRLGPDASGAGRIATLSERGRWAGRLPAEPAFFLDPPPR CCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]