| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is folC [H]
Identifier: 83594760
GI number: 83594760
Start: 3948781
End: 3950088
Strand: Direct
Name: folC [H]
Synonym: Rru_A3431
Alternate gene names: 83594760
Gene position: 3948781-3950088 (Clockwise)
Preceding gene: 83594759
Following gene: 83594768
Centisome position: 90.72
GC content: 72.02
Gene sequence:
>1308_bases ATGAACGCTCCCGATGGGGTGCTCGCCCGCTTGATGGGCCTGCACCCCAAGGTGATCGACCTGTCGCTCGGCCGCGTCGA GCGGTTGCTGGCCGCCCTGGGCCACCCCGAACGGGCCCTGCCGCCGGTCATCCATGTCGCGGGCACCAATGGCAAGGGAT CGGTGGTCGCCACCTGCCGGGCCCTTCTGGAGGCGGCGGGCTACCGGGTCCATGTCTATACCAGCCCCCATTTGGTGCGC TTTGGCGAACGCATCCGGCTGGCCGGCACCCTGATCGCCGACGAGGCGCTCCGTCGGCTGCTTGAAGAGGTGGAAAGCGC CAATGCCAAGGCGCCGATCACCTTTTTCGAGGTGACGACGGCGGCGGCCTTCCTGGCCTTTTCGCGAAGCCCCGCCGATG TGACCTTGCTCGAGGTCGGCCTGGGCGGGCGCCTTGACGCCACCAATGTCATCGCCGATCCCGCCGTTTGCGCGGTGACG CCGATCGATCTTGATCATCAGCAGTATCTGGGATCAACGCTGACGGCCATCGCCGGGGAAAAGGCCGGGATTCTCAAGGC CGGAGCCCCCGCCGTCATCGCCCCCCAACCGCCCGAGGCCGCCCAAACCCTCGCCGCCCGCGCCACCGCCGTCGGCGCGC CGACCCTCTGGGCCGGGCGCGACTGGTCGTGGGAGCGCACGACGACGGGCTGGCGTTTCGCCGGGCTCGATCTGCCGCTC CCCGTGCTTGCCGGTCCCCATCAACTGGGCAACGCCGCCCAGGCCCTGGCGGTGATCGACGCCCTGGAGGCACGGACCGG CCTGCGGGTCGAGGGCGTGGCGCGGGCCAGGGGGCTGCGCGCCGTCGACTGGCCGGCCCGCCTGCAACGGTTAGACAGCG GCCCCTTGGTCGAGAGACTGGCCCCGGGAACCACCTTGTGGCTGGACGGTGGCCATAATCCCCATGCCGGCCGCGCCCTG GCCGCCGCCCTGGGCGACGATGCCAGCGGCCCGCTTGACGTGATTTGCGGCATGCTGGACACCAAGGACGCCGGGGGCTT CCTTGGCGCCCTGGCGCCGCTGGTGCGGCGTTTGCGGTGCGTGGCCGTTCCCGATGGCCAGACCGGCGCCGGCCTGGCCC CCGATGCCCTGGCCGGCCACGCCCGCGCCGCCGGCATCGCCGATGCCCGTTCCTGCGCCTCGGTAGCGGAGGCGCTGACC GACCTCGGCGCGGGCACGACACCGCCCCCCGCCGCCCGCATCCTGATTTGCGGCTCGCTCTATCTGGCCGGCACCGTGCT CGCCGAAAACGGCACTCCGCCGCGCTGA
Upstream 100 bases:
>100_bases GAGGCGGTGGCCCGCAAGGTCGATGACGCCGACTTCGACGGGGCGGACGCCCCGCCACCGCCCGCGCCCAAGCCGGCGAA GCCTTAGGCGGACCGTTGGC
Downstream 100 bases:
>100_bases GGGGTCATCCCTCGACCACGCCCAAGACTCGCAGCCAGGGCAGGATATCGGTGATCAGGGGGGAAAGGCGGTCGGTCAGG GCCTGGGTGGTGGCCGGGCC
Product: folylpolyglutamate synthetase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase [H]
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNAPDGVLARLMGLHPKVIDLSLGRVERLLAALGHPERALPPVIHVAGTNGKGSVVATCRALLEAAGYRVHVYTSPHLVR FGERIRLAGTLIADEALRRLLEEVESANAKAPITFFEVTTAAAFLAFSRSPADVTLLEVGLGGRLDATNVIADPAVCAVT PIDLDHQQYLGSTLTAIAGEKAGILKAGAPAVIAPQPPEAAQTLAARATAVGAPTLWAGRDWSWERTTTGWRFAGLDLPL PVLAGPHQLGNAAQALAVIDALEARTGLRVEGVARARGLRAVDWPARLQRLDSGPLVERLAPGTTLWLDGGHNPHAGRAL AAALGDDASGPLDVICGMLDTKDAGGFLGALAPLVRRLRCVAVPDGQTGAGLAPDALAGHARAAGIADARSCASVAEALT DLGAGTTPPPAARILICGSLYLAGTVLAENGTPPR
Sequences:
>Translated_435_residues MNAPDGVLARLMGLHPKVIDLSLGRVERLLAALGHPERALPPVIHVAGTNGKGSVVATCRALLEAAGYRVHVYTSPHLVR FGERIRLAGTLIADEALRRLLEEVESANAKAPITFFEVTTAAAFLAFSRSPADVTLLEVGLGGRLDATNVIADPAVCAVT PIDLDHQQYLGSTLTAIAGEKAGILKAGAPAVIAPQPPEAAQTLAARATAVGAPTLWAGRDWSWERTTTGWRFAGLDLPL PVLAGPHQLGNAAQALAVIDALEARTGLRVEGVARARGLRAVDWPARLQRLDSGPLVERLAPGTTLWLDGGHNPHAGRAL AAALGDDASGPLDVICGMLDTKDAGGFLGALAPLVRRLRCVAVPDGQTGAGLAPDALAGHARAAGIADARSCASVAEALT DLGAGTTPPPAARILICGSLYLAGTVLAENGTPPR >Mature_435_residues MNAPDGVLARLMGLHPKVIDLSLGRVERLLAALGHPERALPPVIHVAGTNGKGSVVATCRALLEAAGYRVHVYTSPHLVR FGERIRLAGTLIADEALRRLLEEVESANAKAPITFFEVTTAAAFLAFSRSPADVTLLEVGLGGRLDATNVIADPAVCAVT PIDLDHQQYLGSTLTAIAGEKAGILKAGAPAVIAPQPPEAAQTLAARATAVGAPTLWAGRDWSWERTTTGWRFAGLDLPL PVLAGPHQLGNAAQALAVIDALEARTGLRVEGVARARGLRAVDWPARLQRLDSGPLVERLAPGTTLWLDGGHNPHAGRAL AAALGDDASGPLDVICGMLDTKDAGGFLGALAPLVRRLRCVAVPDGQTGAGLAPDALAGHARAAGIADARSCASVAEALT DLGAGTTPPPAARILICGSLYLAGTVLAENGTPPR
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=306, Percent_Identity=32.3529411764706, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI66932984, Length=306, Percent_Identity=32.3529411764706, Blast_Score=137, Evalue=2e-32, Organism=Escherichia coli, GI1788654, Length=430, Percent_Identity=35.3488372093023, Blast_Score=197, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17553148, Length=296, Percent_Identity=31.7567567567568, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI71984923, Length=296, Percent_Identity=31.7567567567568, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17553150, Length=296, Percent_Identity=31.7567567567568, Blast_Score=148, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6323760, Length=428, Percent_Identity=30.3738317757009, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6324815, Length=315, Percent_Identity=29.8412698412698, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322718, Length=287, Percent_Identity=28.2229965156794, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI24641571, Length=212, Percent_Identity=32.5471698113208, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24581568, Length=198, Percent_Identity=31.8181818181818, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 44709; Mature: 44709
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPDGVLARLMGLHPKVIDLSLGRVERLLAALGHPERALPPVIHVAGTNGKGSVVATCR CCCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHH ALLEAAGYRVHVYTSPHLVRFGERIRLAGTLIADEALRRLLEEVESANAKAPITFFEVTT HHHHHCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHH AAAFLAFSRSPADVTLLEVGLGGRLDATNVIADPAVCAVTPIDLDHQQYLGSTLTAIAGE HHHHHHHCCCCCCEEEEEECCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCC KAGILKAGAPAVIAPQPPEAAQTLAARATAVGAPTLWAGRDWSWERTTTGWRFAGLDLPL CCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCC PVLAGPHQLGNAAQALAVIDALEARTGLRVEGVARARGLRAVDWPARLQRLDSGPLVERL HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCEECCCHHHHHHCCCCCHHHHH APGTTLWLDGGHNPHAGRALAAALGDDASGPLDVICGMLDTKDAGGFLGALAPLVRRLRC CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEE VAVPDGQTGAGLAPDALAGHARAAGIADARSCASVAEALTDLGAGTTPPPAARILICGSL EECCCCCCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHH YLAGTVLAENGTPPR HHHEEEEECCCCCCC >Mature Secondary Structure MNAPDGVLARLMGLHPKVIDLSLGRVERLLAALGHPERALPPVIHVAGTNGKGSVVATCR CCCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHH ALLEAAGYRVHVYTSPHLVRFGERIRLAGTLIADEALRRLLEEVESANAKAPITFFEVTT HHHHHCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHH AAAFLAFSRSPADVTLLEVGLGGRLDATNVIADPAVCAVTPIDLDHQQYLGSTLTAIAGE HHHHHHHCCCCCCEEEEEECCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCC KAGILKAGAPAVIAPQPPEAAQTLAARATAVGAPTLWAGRDWSWERTTTGWRFAGLDLPL CCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCC PVLAGPHQLGNAAQALAVIDALEARTGLRVEGVARARGLRAVDWPARLQRLDSGPLVERL HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCEECCCHHHHHHCCCCCHHHHH APGTTLWLDGGHNPHAGRALAAALGDDASGPLDVICGMLDTKDAGGFLGALAPLVRRLRC CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEE VAVPDGQTGAGLAPDALAGHARAAGIADARSCASVAEALTDLGAGTTPPPAARILICGSL EECCCCCCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHH YLAGTVLAENGTPPR HHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]