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The map label for this gene is 83594746

Identifier: 83594746

GI number: 83594746

Start: 3932976

End: 3934205

Strand: Reverse

Name: 83594746

Synonym: Rru_A3417

Alternate gene names: NA

Gene position: 3934205-3932976 (Counterclockwise)

Preceding gene: 83594747

Following gene: 83594745

Centisome position: 90.38

GC content: 64.72

Gene sequence:

>1230_bases
ATGACCGCCCAAGTCCGTCCCCTCGCGCTGCCGCTCGTCCTCGCCGCCGGTTGCCTGCTCGGCGCCTCCGCCCAAGCCGC
CGACAAAACCATGGTGATCGGCGCCCTGACCCCGATCTCGGGGGCGGGCAGCCCCTATGGCTCGGGCATGCAAAAGGCCC
TTCAGGTCGGCGTCGACGACATCAACGCCGCCGGTGGCGCCTGCGGCACCTCCTTGTCGGTGGTGGGCGAGGATACCCAG
ACCAGCCCCGAGGCGGCGGTTCTCGCCGTCAAAAAGCTGGTCGAGGTCAATAAGGTTCAGGCGGTGATGGGCACCTGGTC
GTCGGGCGTCACCCTGGCGGTGATGCCGATCACCACGGCGGCGGGCATTCCGCTGTTGAACACCTCGGGGGCTCCGGCCA
TTTCCACCGACGACAAGGCCGATCTGGTCTGGCGCTTCCAGGCGACCAACGGCCGTTTCGGGCGCGCCTTCGCCGAGATC
GCCGATCAGGGCGGTTTCACGCGGCCGGCGACCATGGCCTTCAACAACGCTTCGGGCATCGGCAATACGCAAGGCTTCGT
CGAGGCTTGGAAGAAAAAGGGCAAGGATATCGTCGCCTCGGTGGTCTATGAGCCCAAGCAGGCCAGCTACCGCTCGGAGC
TGCAAAAGATCCTGGCCGCCAAGCCCGATGTCGTGGTGATGGGGTCCTATCTGCCCGATACCACCATCATCCTGCGCGAA
TGGTTCCAAAGCGGCGAGAACCCCGATCTCAAGTGGATCATTCCCGGCTGGGCGGCCAATGAAAAGCTGGTCGAGGCGCT
TGGGCCGGAGGTGACCGAGGGCCTTTTGTCGGTCGACAGCATCAGCAACGAGAAGGCCGCCTCGCTCGACCATTTCAACA
CCGCCTTTCAGAAGGCCACCGGCGCTTCGACCGGCGGCAATGTCTATGCGGCGATGACCTATGACATGGCCGTGGTCTGG
GGATTGGCCATGCAGGCCTCCTGCCCCGATCTGTCGCCCAAGGCGATCAACGCCAAGATCCGCGCCGTCGATGATGCGGC
CGGCGAGAAGGTCTTCACCTTCGCCGAAGGCAAGGCCGCCCTGGAAGCGGGCAAGACCATCAACTACGAGGGGGCGTCAA
GCCAGCTCGCCCTTGATGCCTATGGCGATGTCACCCCCGATTTCAGCCTGTCGACGATCGCCAAGGGCAAGCTTGTGCGC
AAGGGCGTGGTGTCTCTGCCCATCGAGTGA

Upstream 100 bases:

>100_bases
AGGCCTTGTTGCCCGGCGTCGTCGAGGGCCGCTTCCCGCTGTCGCCGTCCGCGCTTTCCCCGCTCTCCCCCGTCCCGTCC
CCGACCCCAAGGAGTGCCCG

Downstream 100 bases:

>100_bases
CGCCGCCGGCTTTGATCCTTTAGTTGGGGCGGCCGCCGAGCGGGCCGCCCCGCCTCTTCCACCTTTGGGAAGCGAGACCG
ACCGTGGATTCCGCCTATCT

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MTAQVRPLALPLVLAAGCLLGASAQAADKTMVIGALTPISGAGSPYGSGMQKALQVGVDDINAAGGACGTSLSVVGEDTQ
TSPEAAVLAVKKLVEVNKVQAVMGTWSSGVTLAVMPITTAAGIPLLNTSGAPAISTDDKADLVWRFQATNGRFGRAFAEI
ADQGGFTRPATMAFNNASGIGNTQGFVEAWKKKGKDIVASVVYEPKQASYRSELQKILAAKPDVVVMGSYLPDTTIILRE
WFQSGENPDLKWIIPGWAANEKLVEALGPEVTEGLLSVDSISNEKAASLDHFNTAFQKATGASTGGNVYAAMTYDMAVVW
GLAMQASCPDLSPKAINAKIRAVDDAAGEKVFTFAEGKAALEAGKTINYEGASSQLALDAYGDVTPDFSLSTIAKGKLVR
KGVVSLPIE

Sequences:

>Translated_409_residues
MTAQVRPLALPLVLAAGCLLGASAQAADKTMVIGALTPISGAGSPYGSGMQKALQVGVDDINAAGGACGTSLSVVGEDTQ
TSPEAAVLAVKKLVEVNKVQAVMGTWSSGVTLAVMPITTAAGIPLLNTSGAPAISTDDKADLVWRFQATNGRFGRAFAEI
ADQGGFTRPATMAFNNASGIGNTQGFVEAWKKKGKDIVASVVYEPKQASYRSELQKILAAKPDVVVMGSYLPDTTIILRE
WFQSGENPDLKWIIPGWAANEKLVEALGPEVTEGLLSVDSISNEKAASLDHFNTAFQKATGASTGGNVYAAMTYDMAVVW
GLAMQASCPDLSPKAINAKIRAVDDAAGEKVFTFAEGKAALEAGKTINYEGASSQLALDAYGDVTPDFSLSTIAKGKLVR
KGVVSLPIE
>Mature_408_residues
TAQVRPLALPLVLAAGCLLGASAQAADKTMVIGALTPISGAGSPYGSGMQKALQVGVDDINAAGGACGTSLSVVGEDTQT
SPEAAVLAVKKLVEVNKVQAVMGTWSSGVTLAVMPITTAAGIPLLNTSGAPAISTDDKADLVWRFQATNGRFGRAFAEIA
DQGGFTRPATMAFNNASGIGNTQGFVEAWKKKGKDIVASVVYEPKQASYRSELQKILAAKPDVVVMGSYLPDTTIILREW
FQSGENPDLKWIIPGWAANEKLVEALGPEVTEGLLSVDSISNEKAASLDHFNTAFQKATGASTGGNVYAAMTYDMAVVWG
LAMQASCPDLSPKAINAKIRAVDDAAGEKVFTFAEGKAALEAGKTINYEGASSQLALDAYGDVTPDFSLSTIAKGKLVRK
GVVSLPIE

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 42408; Mature: 42276

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQVRPLALPLVLAAGCLLGASAQAADKTMVIGALTPISGAGSPYGSGMQKALQVGVDD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCH
INAAGGACGTSLSVVGEDTQTSPEAAVLAVKKLVEVNKVQAVMGTWSSGVTLAVMPITTA
HCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHH
AGIPLLNTSGAPAISTDDKADLVWRFQATNGRFGRAFAEIADQGGFTRPATMAFNNASGI
CCCCEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCC
GNTQGFVEAWKKKGKDIVASVVYEPKQASYRSELQKILAAKPDVVVMGSYLPDTTIILRE
CCCHHHHHHHHHCCHHEEHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
WFQSGENPDLKWIIPGWAANEKLVEALGPEVTEGLLSVDSISNEKAASLDHFNTAFQKAT
HHHCCCCCCEEEEECCCCCCHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
GASTGGNVYAAMTYDMAVVWGLAMQASCPDLSPKAINAKIRAVDDAAGEKVFTFAEGKAA
CCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCEEEEEECCCHH
LEAGKTINYEGASSQLALDAYGDVTPDFSLSTIAKGKLVRKGVVSLPIE
HHCCCEECCCCCCCEEEEEECCCCCCCCCHHHHHHCHHHHCCCCCCCCC
>Mature Secondary Structure 
TAQVRPLALPLVLAAGCLLGASAQAADKTMVIGALTPISGAGSPYGSGMQKALQVGVDD
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCH
INAAGGACGTSLSVVGEDTQTSPEAAVLAVKKLVEVNKVQAVMGTWSSGVTLAVMPITTA
HCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHH
AGIPLLNTSGAPAISTDDKADLVWRFQATNGRFGRAFAEIADQGGFTRPATMAFNNASGI
CCCCEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCC
GNTQGFVEAWKKKGKDIVASVVYEPKQASYRSELQKILAAKPDVVVMGSYLPDTTIILRE
CCCHHHHHHHHHCCHHEEHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
WFQSGENPDLKWIIPGWAANEKLVEALGPEVTEGLLSVDSISNEKAASLDHFNTAFQKAT
HHHCCCCCCEEEEECCCCCCHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
GASTGGNVYAAMTYDMAVVWGLAMQASCPDLSPKAINAKIRAVDDAAGEKVFTFAEGKAA
CCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCEEEEEECCCHH
LEAGKTINYEGASSQLALDAYGDVTPDFSLSTIAKGKLVRKGVVSLPIE
HHCCCEECCCCCCCEEEEEECCCCCCCCCHHHHHHCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA