| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594738
Identifier: 83594738
GI number: 83594738
Start: 3926470
End: 3927348
Strand: Direct
Name: 83594738
Synonym: Rru_A3409
Alternate gene names: NA
Gene position: 3926470-3927348 (Clockwise)
Preceding gene: 83594736
Following gene: 83594739
Centisome position: 90.21
GC content: 65.07
Gene sequence:
>879_bases ATGGCCGATCAAGCGCTGGATGCGGCGCGTCTGAAAACCGCCCAGGACGTCCTCGATCTGCTGAGGTCCGACTGGCTGCT CGCCCACCGGGCCTTAGACAGCGGCGACTTGCTAAGCGCCGTTGAAACCGTCGGTGATGTCGCCCTGACCGAGGCGGTGC GCTCGGCGGCGGTGATGGAGGTGGAGAACGACGCTGGCAATGCCTTCAACGCCACCGCCGTCCGCCTGTTCTATCTGGAG ATGGCTTTGGGCGACCCGGCGATGCCGACTTTCCACGGCGTTGGCCTGCGCGCCGACTCCCTGGCCCACTATCTGCGCGA CTGCTTCGAAGGCAAGCCGGTCGCCGCCGATCCCGAATTCTTCATCAAAATGCTCTACGCCCTGTCGTTGCTTCAGCACG CCAGCCATTTCACCGGCGATACCGAGTATTTCGACGGGCTGCACGAGGCCTGGAAGCGCGAACTGGCGCTGTTCCTGATT TATGCCACCATGTACAGCCTGGAGGGCATGCCCGACGAGCTGGTGAGCGCCATCGTCCTCGGCGACGAGGCCGACGACGA TGTGGGCACCAGCATGCTGGCGGCGCTGAAGGCCAGCTATGACGCCGATAAGACCGAGATCACCGTGCAGGCGGGGGTGG TCGGCTTTTTCGTGCTCAACACCACCGCCATCGAGCGGCCGGCCCTGATGCTGCTTGGCTGCCTGACCGAAGAGGATCAC GCCGCGATCCAGGAGGCGACGGCCCAGGAGATCACCCCCGATATCGCCGGCCACGCCCTGTTCACCACCCTGGGCGACAC CAGCAACGGCAGCCCCGCCCAGCTTCTCTGGGGCCAGCTGCTGGCCAGCATCATCCGCCAGATCGAAAGCCGCGACTAG
Upstream 100 bases:
>100_bases CCATGCTAGCATGGCCGGGCCGTCCCCAGGGGGGGCGCCGACGCAAAGGGCGTTGGCGGCTTCGGGGATGTTCCTTCACC GGCTACAGGAGATCCCGACG
Downstream 100 bases:
>100_bases AGCCAATCCCGACAACGATTTGCTTGACTATCAATAGCTTAGAGCGGCGTGCCCGACCCAAATTTCCGGCACGCCGCGCT AAGACGGGACCAGCCACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MADQALDAARLKTAQDVLDLLRSDWLLAHRALDSGDLLSAVETVGDVALTEAVRSAAVMEVENDAGNAFNATAVRLFYLE MALGDPAMPTFHGVGLRADSLAHYLRDCFEGKPVAADPEFFIKMLYALSLLQHASHFTGDTEYFDGLHEAWKRELALFLI YATMYSLEGMPDELVSAIVLGDEADDDVGTSMLAALKASYDADKTEITVQAGVVGFFVLNTTAIERPALMLLGCLTEEDH AAIQEATAQEITPDIAGHALFTTLGDTSNGSPAQLLWGQLLASIIRQIESRD
Sequences:
>Translated_292_residues MADQALDAARLKTAQDVLDLLRSDWLLAHRALDSGDLLSAVETVGDVALTEAVRSAAVMEVENDAGNAFNATAVRLFYLE MALGDPAMPTFHGVGLRADSLAHYLRDCFEGKPVAADPEFFIKMLYALSLLQHASHFTGDTEYFDGLHEAWKRELALFLI YATMYSLEGMPDELVSAIVLGDEADDDVGTSMLAALKASYDADKTEITVQAGVVGFFVLNTTAIERPALMLLGCLTEEDH AAIQEATAQEITPDIAGHALFTTLGDTSNGSPAQLLWGQLLASIIRQIESRD >Mature_291_residues ADQALDAARLKTAQDVLDLLRSDWLLAHRALDSGDLLSAVETVGDVALTEAVRSAAVMEVENDAGNAFNATAVRLFYLEM ALGDPAMPTFHGVGLRADSLAHYLRDCFEGKPVAADPEFFIKMLYALSLLQHASHFTGDTEYFDGLHEAWKRELALFLIY ATMYSLEGMPDELVSAIVLGDEADDDVGTSMLAALKASYDADKTEITVQAGVVGFFVLNTTAIERPALMLLGCLTEEDHA AIQEATAQEITPDIAGHALFTTLGDTSNGSPAQLLWGQLLASIIRQIESRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31540; Mature: 31409
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQALDAARLKTAQDVLDLLRSDWLLAHRALDSGDLLSAVETVGDVALTEAVRSAAVME CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE VENDAGNAFNATAVRLFYLEMALGDPAMPTFHGVGLRADSLAHYLRDCFEGKPVAADPEF EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH FIKMLYALSLLQHASHFTGDTEYFDGLHEAWKRELALFLIYATMYSLEGMPDELVSAIVL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GDEADDDVGTSMLAALKASYDADKTEITVQAGVVGFFVLNTTAIERPALMLLGCLTEEDH CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAIQEATAQEITPDIAGHALFTTLGDTSNGSPAQLLWGQLLASIIRQIESRD HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADQALDAARLKTAQDVLDLLRSDWLLAHRALDSGDLLSAVETVGDVALTEAVRSAAVME CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE VENDAGNAFNATAVRLFYLEMALGDPAMPTFHGVGLRADSLAHYLRDCFEGKPVAADPEF EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH FIKMLYALSLLQHASHFTGDTEYFDGLHEAWKRELALFLIYATMYSLEGMPDELVSAIVL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GDEADDDVGTSMLAALKASYDADKTEITVQAGVVGFFVLNTTAIERPALMLLGCLTEEDH CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAIQEATAQEITPDIAGHALFTTLGDTSNGSPAQLLWGQLLASIIRQIESRD HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA