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The map label for this gene is yfhP [C]

Identifier: 83594728

GI number: 83594728

Start: 3915285

End: 3915767

Strand: Direct

Name: yfhP [C]

Synonym: Rru_A3399

Alternate gene names: 83594728

Gene position: 3915285-3915767 (Clockwise)

Preceding gene: 83594726

Following gene: 83594729

Centisome position: 89.95

GC content: 64.6

Gene sequence:

>483_bases
GTGATATCGCAAAAAGCCAAATACGGGTTTCGGGCTCTCTTCGCTTTGGCCGATGCAGAGGGCGGCCAGTTGAGGATCGA
GGATATCGCCGAGCGCCAGCGTATTCCGCGCAAGTTCCTCGAACAGATCCTGCTTGACCTGAAACACCATGGGCTGGTCG
TCAGCTTCCGTGGCAAGAATGGCGGCTATGCCCTGCGCCGCGATCCCAAGGATATTTCCTTCACCGAGGTCCTTCGCCTG
ATCGACGGACCGATCGCCCCCCTGCCCTGCCTCAGCCGCACCGCCTATCGCGCCTGCGAGGATTGCGAGGGCGAGACGGC
CTGCCGGATGCGCCTGGTGTTCGGGGCGGCTTACGACCGCATGCTCGAGGTTCTGGAAACCACCAGCCTGGGCGATGCGA
TGAACGGCCGCCTTGGCGGCGGTCTGTCGCCGCTGATCGACGACACCGACACCCCCGCCGCCCCCCGCGCCCTCAACGCC
TGA

Upstream 100 bases:

>100_bases
GGTGTTTGGCACCGGGCGCCGGGTGACACCCGCCTTGACGCCGATCTGAAAGCGGCCCATTTTTATTGTCTATAAATCAC
ATGGGGATTTCGGGGCCGTC

Downstream 100 bases:

>100_bases
AACCCGCCCCGCCCTGGAAGTGCGTGCCTTATTCAGACACCGGATCGTCCGTGTCCTGGCCGGATGGACCGACAAACGTC
TGGCGAAAAAACGCGCGAGT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MISQKAKYGFRALFALADAEGGQLRIEDIAERQRIPRKFLEQILLDLKHHGLVVSFRGKNGGYALRRDPKDISFTEVLRL
IDGPIAPLPCLSRTAYRACEDCEGETACRMRLVFGAAYDRMLEVLETTSLGDAMNGRLGGGLSPLIDDTDTPAAPRALNA

Sequences:

>Translated_160_residues
MISQKAKYGFRALFALADAEGGQLRIEDIAERQRIPRKFLEQILLDLKHHGLVVSFRGKNGGYALRRDPKDISFTEVLRL
IDGPIAPLPCLSRTAYRACEDCEGETACRMRLVFGAAYDRMLEVLETTSLGDAMNGRLGGGLSPLIDDTDTPAAPRALNA
>Mature_160_residues
MISQKAKYGFRALFALADAEGGQLRIEDIAERQRIPRKFLEQILLDLKHHGLVVSFRGKNGGYALRRDPKDISFTEVLRL
IDGPIAPLPCLSRTAYRACEDCEGETACRMRLVFGAAYDRMLEVLETTSLGDAMNGRLGGGLSPLIDDTDTPAAPRALNA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=137, Percent_Identity=29.9270072992701, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17594; Mature: 17594

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISQKAKYGFRALFALADAEGGQLRIEDIAERQRIPRKFLEQILLDLKHHGLVVSFRGKN
CCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
GGYALRRDPKDISFTEVLRLIDGPIAPLPCLSRTAYRACEDCEGETACRMRLVFGAAYDR
CCEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MLEVLETTSLGDAMNGRLGGGLSPLIDDTDTPAAPRALNA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISQKAKYGFRALFALADAEGGQLRIEDIAERQRIPRKFLEQILLDLKHHGLVVSFRGKN
CCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
GGYALRRDPKDISFTEVLRLIDGPIAPLPCLSRTAYRACEDCEGETACRMRLVFGAAYDR
CCEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MLEVLETTSLGDAMNGRLGGGLSPLIDDTDTPAAPRALNA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]