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The map label for this gene is oxaA [H]

Identifier: 83594668

GI number: 83594668

Start: 3850574

End: 3852361

Strand: Direct

Name: oxaA [H]

Synonym: Rru_A3339

Alternate gene names: 83594668

Gene position: 3850574-3852361 (Clockwise)

Preceding gene: 83594667

Following gene: 83594669

Centisome position: 88.46

GC content: 62.53

Gene sequence:

>1788_bases
ATGCTGCAACAGCGTAACCTTATCCTCGCCATCGTGCTGTCCATGGCGGTCCTGTTCGGCTTCGAATACTTCTTCGGAGC
CAAGCAACCCCCGATGACGGCGCAGCAGCAGGACAGCGCCCAGATGGCGGCGCCATCAAACGGTCAGATGGCGGCGCCAT
CAAGCGTCCAGGCGCCGGGACAAAGCCCGGTCGCGGCACCGCAGGTGCCCGCCCAGCCGGGCGCGGCGGTTCCCACGCCC
GGCGGCATGACCCCCGGCGCGGCAAGCCTGTCGCGTGAAGAGGCCCTGGCCGCCGATATCAGCCCGCGAATCGGCATCGA
TACCGCCCGCCTGCATGGCTCGATCCGCCTGCGCGGCGCCCGTATCGACGACCTTAGCTTGGTCGATTACCGCGAGACCG
TTGATCCGCAGAGCCCGGAAATCTCCCTGCTTTCGCCCCCGGGCGCGCCTTTGCCCTATTATGCCGAATTCGGCTGGGTC
GCCGGCACCCCGGGCGTCAAGGTCCCCGATGCCGACACCCTGTGGCAGGCCGACCGCGGCGCGCTGGGCGTCGACGCCCC
CGTCACCCTGACCTGGGACAACGGCGAGGGCCTGCGCTTCATCCGCAAGATCGCCATCGACCACGATTTCATGTTCTCGA
TCACCCAGGCGGTGGAAAACACCGGGGCGGGGGCCGTCACCCTGTTCCCCTATGGTCTGGTTTCGCGGATCAACACCCCG
GCCCTGCTCAACTACTACATCCTTCACGAGGGCCCGCTCGGCGTCTTCGACGGCACCTTGAAGGAGGTCAAGTACAGCGC
CCTGAAGGACGATGGCGAGGTCAAGCACACCTCGACCGGCGGCTGGATGGGCATCACCGACAAGTATTGGCTGACCGCCC
TGGTCACCGACCAGTCGATGCCGGTCACCGGCCGCTTCCTCTATCAGCCGCGCGATGGCCGCGATGGTTATCAGGCCGAT
TTCCTGGGCGCCGCCTTCACCGTCGAGCCCGGCGGCCGCATCGAGACCTCGAACCATCTGTTCTCGGGCGCCAAGGAAGT
GAAGCTGCTCGACCGCTATACGGACGAGCTGGGCATCAAGAATTTCGATCTGGCGATCGATTTCGGCTGGTTCTACTTCA
TGACCAAGCCGTTCTTCCTCAGCATCCAGTTCCTGCATGGCATCCTGGGCAACATGGGTCTGGCGATCCTCGCCTTCACC
GTGGTGCTGAAGCTGGTCTTCTTCCCGCTGGCCAATAAGTCCTATCGGTCGATGTCGAAGATGAAGCTGCTCCAGCCCGA
GCTGAAGAAGCTTCAGGAGCGCTTCAAGGACGATCGCGCCCGCCTTAATCAGGAGATGATGTCTCTTTATAAAAAAGAGC
AGGTCAATCCCTTGTCGGGCTGTCTGCCGATCGTCATTCAGATCCCGGTGTTCTTCGCCCTCTATAAGGTTCTGTTCGTT
TCCATCGAGATGCGCCACGAGCCGTTCTATGGCTGGATCCGCGATCTCGCCGCCCCCGATCCGACCACCGTCTTCAACCT
GTTCGGGCTGATCCCCTGGGATCCGCCGAACATGCTGATGCTGGGCGCTTGGCCGCTGATCATGGGCGTGACCATGTGGA
TGCAGCAGAAGCTGAACCCGACTCCGGCCGATCCGACCCAGGCCAAGATCATGATGTTCCTGCCCATCATGTTCACCTTC
ATGCTGGCCCATTTCGCCGCCGGACTGGTGATCTACTGGACCTGGAACAACTTGCTCTCGATCACCCAGCAGTGGGTCAT
CATGAAGCGGATGGGGGCTAAGACCTAA

Upstream 100 bases:

>100_bases
CCGACGGGACAGATCCGGATTAGACCCTCGCCGACTGCCCGACGTGCCCTCCTCAGCTGGGCCGAACGGCGCACAACTGC
TGAAGTGGGAAGGCAGAGTA

Downstream 100 bases:

>100_bases
AGACATGGCGGATTTGCCCGAAACACCCGCTTTTGGCGCGGCCTTTTCCGATGAGGAAGAGGCCGCCCGCGCCCTAGAGG
CCGGGCGCTGGCTGTTCTCC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPGQSPVAAPQVPAQPGAAVPTP
GGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGARIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWV
AGTPGVKVPDADTLWQADRGALGVDAPVTLTWDNGEGLRFIRKIAIDHDFMFSITQAVENTGAGAVTLFPYGLVSRINTP
ALLNYYILHEGPLGVFDGTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQSMPVTGRFLYQPRDGRDGYQAD
FLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELGIKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFT
VVLKLVFFPLANKSYRSMSKMKLLQPELKKLQERFKDDRARLNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKVLFV
SIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQKLNPTPADPTQAKIMMFLPIMFTF
MLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAKT

Sequences:

>Translated_595_residues
MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPGQSPVAAPQVPAQPGAAVPTP
GGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGARIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWV
AGTPGVKVPDADTLWQADRGALGVDAPVTLTWDNGEGLRFIRKIAIDHDFMFSITQAVENTGAGAVTLFPYGLVSRINTP
ALLNYYILHEGPLGVFDGTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQSMPVTGRFLYQPRDGRDGYQAD
FLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELGIKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFT
VVLKLVFFPLANKSYRSMSKMKLLQPELKKLQERFKDDRARLNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKVLFV
SIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQKLNPTPADPTQAKIMMFLPIMFTF
MLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAKT
>Mature_595_residues
MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPGQSPVAAPQVPAQPGAAVPTP
GGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGARIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWV
AGTPGVKVPDADTLWQADRGALGVDAPVTLTWDNGEGLRFIRKIAIDHDFMFSITQAVENTGAGAVTLFPYGLVSRINTP
ALLNYYILHEGPLGVFDGTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQSMPVTGRFLYQPRDGRDGYQAD
FLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELGIKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFT
VVLKLVFFPLANKSYRSMSKMKLLQPELKKLQERFKDDRARLNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKVLFV
SIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQKLNPTPADPTQAKIMMFLPIMFTF
MLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAKT

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=503, Percent_Identity=29.6222664015905, Blast_Score=228, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 65941; Mature: 65941

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
QSPVAAPQVPAQPGAAVPTPGGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEECC
RIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWVAGTPGVKVPDADTLWQADRG
CCCCCEEECHHHHCCCCCCCEEEECCCCCCCCCHHCCCCEECCCCCCCCCCHHHHCCCCC
ALGVDAPVTLTWDNGEGLRFIRKIAIDHDFMFSITQAVENTGAGAVTLFPYGLVSRINTP
CCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCC
ALLNYYILHEGPLGVFDGTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQSM
HHEEEEEEECCCCCHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHEEEEEEECCCC
PVTGRFLYQPRDGRDGYQADFLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELGIK
CCCEEEEECCCCCCCCCCHHHCCEEEEECCCCCEECCCHHHCCHHHHHHHHHHHHHHCCC
NFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFTVVLKLVFFPLANKSYRSMSK
CEEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MKLLQPELKKLQERFKDDRARLNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKVLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQKLNP
HHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCC
TPADPTQAKIMMFLPIMFTFMLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAKT
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
QSPVAAPQVPAQPGAAVPTPGGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEECC
RIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWVAGTPGVKVPDADTLWQADRG
CCCCCEEECHHHHCCCCCCCEEEECCCCCCCCCHHCCCCEECCCCCCCCCCHHHHCCCCC
ALGVDAPVTLTWDNGEGLRFIRKIAIDHDFMFSITQAVENTGAGAVTLFPYGLVSRINTP
CCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCC
ALLNYYILHEGPLGVFDGTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQSM
HHEEEEEEECCCCCHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHEEEEEEECCCC
PVTGRFLYQPRDGRDGYQADFLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELGIK
CCCEEEEECCCCCCCCCCHHHCCEEEEECCCCCEECCCHHHCCHHHHHHHHHHHHHHCCC
NFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFTVVLKLVFFPLANKSYRSMSK
CEEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MKLLQPELKKLQERFKDDRARLNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKVLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQKLNP
HHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCC
TPADPTQAKIMMFLPIMFTFMLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAKT
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA