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The map label for this gene is fixN [H]

Identifier: 83594661

GI number: 83594661

Start: 3843795

End: 3845285

Strand: Reverse

Name: fixN [H]

Synonym: Rru_A3332

Alternate gene names: 83594661

Gene position: 3845285-3843795 (Counterclockwise)

Preceding gene: 83594664

Following gene: 83594660

Centisome position: 88.34

GC content: 61.5

Gene sequence:

>1491_bases
TTGACGCAGGCGACCATAGCGCGCGGCGCGCGGGCGGATACCGAGCCCTACGTCGAGGGCGTGATCAAGAAGTTCGTCAT
CGCAGCGGTTCTGTGGGGCGTGGTTGGATTTATCGCCGGCGACGTCATCGCCTGGCAGCTGGCGTTCCCGTCGCTGAACA
TGGACCTGGAATGGACCAGTTTCGGTCGCTTGCGTCCCCTTCACACCTCCGCGGTGGTTTTCGCCTTCGGTGGCAACGTC
CTGCTTGGCACGTCGCTCTATGTTGTCCAGCGAACCTCGCGCGCCAGCCTGTATGGCGGCGCCGCGCTTGGCAATATCAT
CTTCTGGGGCTACCAGCTGTTCATCGTCATGGCCGCTCTCGGCTATGTGCTGGGCGTCACCCAGGGCAAGGAATATGCCG
AGCCCGAATGGTTCGTCGACCTGTTCCTGACCGTGGTCTGGGTGCTTTATCTGGCGGCTTTCCTCGGCACCCTTCTCAAG
CGCCGCGAGCCCCATATCTATGTCGCCAACTGGTTCTTCCTGGCGATGATCATCACCATCGCCCTGCTGCACCTGGGCAA
CAACATGGCCATTCCCGTCGCCCTGATGGGCGGCGACTCGTGGGTCAAAAGCTACGGCTTCTATTCGGGCGTCCAGGACG
CCATGACCCAATGGTGGTATGGGCATAACGCCGTCGGCTTCTTCCTGACCGCCGGTTTCCTCGGCATCATGTATTATTTC
GTGCCCAAGCAGGCGCAGCGCCCGGTCTATTCCTACCGGTTGTCGATCGTGCACTTCTGGGCGCTGATCTTCCTTTATAT
CTGGGCCGGTCCCCATCACCTGCATTACACCGCCCTGCCCGATTGGGCGCAGACGGTGGGCATGGTGTTCTCGGTGATGT
TGTGGATGCCCTCCTGGGGAGGGATGATCAACGGCCTGATGACGCTGTCGGGGGCCTGGGACAAGCTGCGCACCGATCCG
GTCTTGCGCTTCCTGGTGGTCTCCGTCGGCTTCTATGGCATGTCGACCTTCGAAGGGCCGATGATGTCGATCAAGGCCGT
CAACTCGCTGTCCCACTACACCGATTGGACCATCGGCCACGTGCATTCCGGGGCCCTGGGCTGGGTGGCCTTCGTGTCCT
TCGGCGCGCTCTATTACCTGGTTCCGGCCCTGTGGAAGCGCCGCTCGCTGTATTCCCTGAAACTCGTCAGCCTGCACTTC
TGGATCGCTACCCTGGGCATTGTGCTCTACATCACCTCGATGTGGGTCTCGGGCATCATGCAGGGCCTGATGTGGCGCGC
TTACGACGAGTTGGGGTTCTTGCAGTACTCGTTCATCGAATCCGTGGCCGCCATGCATCCCTATTACATCATCCGGGCGA
CCGGCGGGGTGCTGTTCGTCATCGGCTCGGTGGTGATGGTCTACAACATGTATCGCACCATCAAGGGTGACATCCGCGAG
GACGCGCCCCAGGCGGCCTATCTCGGGTCCGCCGCCGGTGTCCGACGGTAA

Upstream 100 bases:

>100_bases
GGCGGGCCTTTTGGCCAAACGGAACCGTCGGTCGCGATCGAGCAAATGGGCAGGGGCATGGTGCGTCCTGTCCCTCTAGA
GGTCGATACAGGAGGCGGCA

Downstream 100 bases:

>100_bases
GGGGGGGCGGGACAATGAGTCTGCTCAAGCATCACGCCAAGATCGAAACCAACGCCCTGTTCCTCACCGTGGGGATTTTC
CTCACGGTGATCATCGGCGG

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTQATIARGARADTEPYVEGVIKKFVIAAVLWGVVGFIAGDVIAWQLAFPSLNMDLEWTSFGRLRPLHTSAVVFAFGGNV
LLGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFIVMAALGYVLGVTQGKEYAEPEWFVDLFLTVVWVLYLAAFLGTLLK
RREPHIYVANWFFLAMIITIALLHLGNNMAIPVALMGGDSWVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYF
VPKQAQRPVYSYRLSIVHFWALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWGGMINGLMTLSGAWDKLRTDP
VLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWVAFVSFGALYYLVPALWKRRSLYSLKLVSLHF
WIATLGIVLYITSMWVSGIMQGLMWRAYDELGFLQYSFIESVAAMHPYYIIRATGGVLFVIGSVVMVYNMYRTIKGDIRE
DAPQAAYLGSAAGVRR

Sequences:

>Translated_496_residues
MTQATIARGARADTEPYVEGVIKKFVIAAVLWGVVGFIAGDVIAWQLAFPSLNMDLEWTSFGRLRPLHTSAVVFAFGGNV
LLGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFIVMAALGYVLGVTQGKEYAEPEWFVDLFLTVVWVLYLAAFLGTLLK
RREPHIYVANWFFLAMIITIALLHLGNNMAIPVALMGGDSWVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYF
VPKQAQRPVYSYRLSIVHFWALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWGGMINGLMTLSGAWDKLRTDP
VLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWVAFVSFGALYYLVPALWKRRSLYSLKLVSLHF
WIATLGIVLYITSMWVSGIMQGLMWRAYDELGFLQYSFIESVAAMHPYYIIRATGGVLFVIGSVVMVYNMYRTIKGDIRE
DAPQAAYLGSAAGVRR
>Mature_495_residues
TQATIARGARADTEPYVEGVIKKFVIAAVLWGVVGFIAGDVIAWQLAFPSLNMDLEWTSFGRLRPLHTSAVVFAFGGNVL
LGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFIVMAALGYVLGVTQGKEYAEPEWFVDLFLTVVWVLYLAAFLGTLLKR
REPHIYVANWFFLAMIITIALLHLGNNMAIPVALMGGDSWVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYFV
PKQAQRPVYSYRLSIVHFWALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWGGMINGLMTLSGAWDKLRTDPV
LRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWVAFVSFGALYYLVPALWKRRSLYSLKLVSLHFW
IATLGIVLYITSMWVSGIMQGLMWRAYDELGFLQYSFIESVAAMHPYYIIRATGGVLFVIGSVVMVYNMYRTIKGDIRED
APQAAYLGSAAGVRR

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 55628; Mature: 55497

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQATIARGARADTEPYVEGVIKKFVIAAVLWGVVGFIAGDVIAWQLAFPSLNMDLEWTS
CCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECC
FGRLRPLHTSAVVFAFGGNVLLGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFIVMAAL
CCCCCCCCCCEEEEEECCCEEECCEEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHH
GYVLGVTQGKEYAEPEWFVDLFLTVVWVLYLAAFLGTLLKRREPHIYVANWFFLAMIITI
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
ALLHLGNNMAIPVALMGGDSWVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYF
HHHHCCCCCEEEEEEECCHHHHHHHCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VPKQAQRPVYSYRLSIVHFWALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWG
CCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
GMINGLMTLSGAWDKLRTDPVLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGH
HHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHC
VHSGALGWVAFVSFGALYYLVPALWKRRSLYSLKLVSLHFWIATLGIVLYITSMWVSGIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLMWRAYDELGFLQYSFIESVAAMHPYYIIRATGGVLFVIGSVVMVYNMYRTIKGDIRE
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHC
DAPQAAYLGSAAGVRR
CCCHHHHHCCCCCCCC
>Mature Secondary Structure 
TQATIARGARADTEPYVEGVIKKFVIAAVLWGVVGFIAGDVIAWQLAFPSLNMDLEWTS
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECC
FGRLRPLHTSAVVFAFGGNVLLGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFIVMAAL
CCCCCCCCCCEEEEEECCCEEECCEEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHH
GYVLGVTQGKEYAEPEWFVDLFLTVVWVLYLAAFLGTLLKRREPHIYVANWFFLAMIITI
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
ALLHLGNNMAIPVALMGGDSWVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYF
HHHHCCCCCEEEEEEECCHHHHHHHCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VPKQAQRPVYSYRLSIVHFWALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWG
CCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
GMINGLMTLSGAWDKLRTDPVLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGH
HHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHC
VHSGALGWVAFVSFGALYYLVPALWKRRSLYSLKLVSLHFWIATLGIVLYITSMWVSGIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLMWRAYDELGFLQYSFIESVAAMHPYYIIRATGGVLFVIGSVVMVYNMYRTIKGDIRE
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHC
DAPQAAYLGSAAGVRR
CCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8386371; 12597275 [H]