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The map label for this gene is rdxB [H]

Identifier: 83594655

GI number: 83594655

Start: 3836235

End: 3837755

Strand: Reverse

Name: rdxB [H]

Synonym: Rru_A3326

Alternate gene names: 83594655

Gene position: 3837755-3836235 (Counterclockwise)

Preceding gene: 83594657

Following gene: 83594654

Centisome position: 88.17

GC content: 61.74

Gene sequence:

>1521_bases
ATGCGAACGATTCCAAGAAAGGCTGGCGTCACTATGGCTGTAGCAAACGAAGGACCGGGTTCCCAAGCGGGTCAAAGCCG
CACCGCCCAGGCCATCAAGCCGATCCCCGGTGGAAATTCCCTTTACGAGAGTTATCAAAAGGTCCATCCGCGCCGGATCA
GCGGCACCTATCGCTCGATCAAATGGTGGATGATGGGCCTGCTGCTGACCATCTTCTGGGTCGGCCCCTGGCTGCGCTGG
GATCGTGGACCAAGCGTGTCCGATCAGGCCATCTTCATCGACATGCCCGGGCGCCGGGCCTATTTCTTCTTTATCGAGAT
CTGGCCCCAAGAGGTTTATTACCTGACGGGCCTGCTGATCATCGCCGCCGTCGGCCTGTTCTTCGCCACCGCTCTGCTCG
GGCGGGTATGGTGTGGCTTCGCCTGCTTCCAGACGGTTTTCACCGATCTGTTCGTCGCCGTCGAACGGCTGCTCGAAGGC
GATCGCAACAGCCGCATCAAGCGCGACAGTTCGCCGATGACCGTCGATACCCTGATGCGCAAGACCCTGAAAACCGTCAT
TTGGGTTCTGATCTCGCTGGCCGTGGGCATCGGCTTCATCCTGTATTTCTATCCCGCGCCCTGGCCGGCCATCGTCGATA
TCGTCACCTTCAATGCCGGGGCCGCCGCCTATGGCACGCTGGCGGTGGTTGGCGGCGGCTGCCTGATCATGGCCGGTTAC
GCCCGCGAGCAGGTCTGCATGTACATGTGCCCCTATGCCCGCTTCCAGTCGGCGATGGTCGATGAGGACTCGATGATCGT
CACCTATGAGAAGTGGCGGGGCGAGCCGCGGGGCAAATACAGCCGCGACGCCGATTTTTCCCAGCGCGGCGATTGCGTTG
ACTGCGGCCTCTGCGTTCAGGTCTGCCCGACCGGCGTCGATATCCGCGAAGGCACGCAATTGGGCTGCATCGGCTGTGGA
TTGTGCGTTGACGCCTGTAATTCGGTGATGACCCGCTTCGGTCTGCCGCCCAATCTGATCGCCTATGATTCGATCACCAA
TCAGAACGCCCGGGCCGAGGGCAGTTCGCGGCGCATCCGTCTGATCCGTCCGCGCACCCTGGTCTATTCGGCTTTGCTGC
TGGTGGTCATCGGGGCGATGGCGGCCAGTCTGGCGACCCGCTCGCGGCTTGACATCAGCGTTCTTCACGAGCGCAGCCCG
CTGTTCGTCACCATGTCCGACGGATCGGTGCGCAACGGCTATACCTTCAAGGTCCTCAATATGGAGCGCATCGACAACGC
CTTCTCGTTGACGACCACCGGCATCGCCGGGGCGACGATCGAGATCGTCGGGGTGACCAAGGGTCCGGTGACCGAAGCCA
ATCTGCCGGTCGCCGGTGACAAGGTCGGCACCTTCCGCCTCTATGTCTCGGCTCCCCGGGCTTCGCTTCCCGCTCCGACC
AATGATATCAGCTTCGTGCTGATCAATTCCGCCACCGGGCAAACCCAGACCTATAAATCGCTGTTCGCCGGTCCCCGGTG
A

Upstream 100 bases:

>100_bases
ACAGGACCTGCGGCATAGCGACCCAATCGACGCTTCGCTTAAGGGGCCCTTCGGGGTTATCCTACGGGAAGCGCCGGTTT
TTTATCGCCTTGCCGGCAAA

Downstream 100 bases:

>100_bases
TCGGCTAGTCTCGGGCCGCTTTCCCTGCGATCTGGAAGCGGCCCAAGGTCGTCCGGGATCGCCCGGAATGTTTGGGCGAG
GGCCGGCCGGCCCGATGCCC

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MRTIPRKAGVTMAVANEGPGSQAGQSRTAQAIKPIPGGNSLYESYQKVHPRRISGTYRSIKWWMMGLLLTIFWVGPWLRW
DRGPSVSDQAIFIDMPGRRAYFFFIEIWPQEVYYLTGLLIIAAVGLFFATALLGRVWCGFACFQTVFTDLFVAVERLLEG
DRNSRIKRDSSPMTVDTLMRKTLKTVIWVLISLAVGIGFILYFYPAPWPAIVDIVTFNAGAAAYGTLAVVGGGCLIMAGY
AREQVCMYMCPYARFQSAMVDEDSMIVTYEKWRGEPRGKYSRDADFSQRGDCVDCGLCVQVCPTGVDIREGTQLGCIGCG
LCVDACNSVMTRFGLPPNLIAYDSITNQNARAEGSSRRIRLIRPRTLVYSALLLVVIGAMAASLATRSRLDISVLHERSP
LFVTMSDGSVRNGYTFKVLNMERIDNAFSLTTTGIAGATIEIVGVTKGPVTEANLPVAGDKVGTFRLYVSAPRASLPAPT
NDISFVLINSATGQTQTYKSLFAGPR

Sequences:

>Translated_506_residues
MRTIPRKAGVTMAVANEGPGSQAGQSRTAQAIKPIPGGNSLYESYQKVHPRRISGTYRSIKWWMMGLLLTIFWVGPWLRW
DRGPSVSDQAIFIDMPGRRAYFFFIEIWPQEVYYLTGLLIIAAVGLFFATALLGRVWCGFACFQTVFTDLFVAVERLLEG
DRNSRIKRDSSPMTVDTLMRKTLKTVIWVLISLAVGIGFILYFYPAPWPAIVDIVTFNAGAAAYGTLAVVGGGCLIMAGY
AREQVCMYMCPYARFQSAMVDEDSMIVTYEKWRGEPRGKYSRDADFSQRGDCVDCGLCVQVCPTGVDIREGTQLGCIGCG
LCVDACNSVMTRFGLPPNLIAYDSITNQNARAEGSSRRIRLIRPRTLVYSALLLVVIGAMAASLATRSRLDISVLHERSP
LFVTMSDGSVRNGYTFKVLNMERIDNAFSLTTTGIAGATIEIVGVTKGPVTEANLPVAGDKVGTFRLYVSAPRASLPAPT
NDISFVLINSATGQTQTYKSLFAGPR
>Mature_506_residues
MRTIPRKAGVTMAVANEGPGSQAGQSRTAQAIKPIPGGNSLYESYQKVHPRRISGTYRSIKWWMMGLLLTIFWVGPWLRW
DRGPSVSDQAIFIDMPGRRAYFFFIEIWPQEVYYLTGLLIIAAVGLFFATALLGRVWCGFACFQTVFTDLFVAVERLLEG
DRNSRIKRDSSPMTVDTLMRKTLKTVIWVLISLAVGIGFILYFYPAPWPAIVDIVTFNAGAAAYGTLAVVGGGCLIMAGY
AREQVCMYMCPYARFQSAMVDEDSMIVTYEKWRGEPRGKYSRDADFSQRGDCVDCGLCVQVCPTGVDIREGTQLGCIGCG
LCVDACNSVMTRFGLPPNLIAYDSITNQNARAEGSSRRIRLIRPRTLVYSALLLVVIGAMAASLATRSRLDISVLHERSP
LFVTMSDGSVRNGYTFKVLNMERIDNAFSLTTTGIAGATIEIVGVTKGPVTEANLPVAGDKVGTFRLYVSAPRASLPAPT
NDISFVLINSATGQTQTYKSLFAGPR

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55507; Mature: 55507

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIPRKAGVTMAVANEGPGSQAGQSRTAQAIKPIPGGNSLYESYQKVHPRRISGTYRSI
CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCHHHCCHHHHH
KWWMMGLLLTIFWVGPWLRWDRGPSVSDQAIFIDMPGRRAYFFFIEIWPQEVYYLTGLLI
HHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEEECCCCEEEEEEEEECCHHHHHHHHHHH
IAAVGLFFATALLGRVWCGFACFQTVFTDLFVAVERLLEGDRNSRIKRDSSPMTVDTLMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
KTLKTVIWVLISLAVGIGFILYFYPAPWPAIVDIVTFNAGAAAYGTLAVVGGGCLIMAGY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCHHHHHHEEECCCEEEEECC
AREQVCMYMCPYARFQSAMVDEDSMIVTYEKWRGEPRGKYSRDADFSQRGDCVDCGLCVQ
HHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCEEECCHHEE
VCPTGVDIREGTQLGCIGCGLCVDACNSVMTRFGLPPNLIAYDSITNQNARAEGSSRRIR
CCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEE
LIRPRTLVYSALLLVVIGAMAASLATRSRLDISVLHERSPLFVTMSDGSVRNGYTFKVLN
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEE
MERIDNAFSLTTTGIAGATIEIVGVTKGPVTEANLPVAGDKVGTFRLYVSAPRASLPAPT
HHHCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
NDISFVLINSATGQTQTYKSLFAGPR
CCEEEEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRTIPRKAGVTMAVANEGPGSQAGQSRTAQAIKPIPGGNSLYESYQKVHPRRISGTYRSI
CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCHHHCCHHHHH
KWWMMGLLLTIFWVGPWLRWDRGPSVSDQAIFIDMPGRRAYFFFIEIWPQEVYYLTGLLI
HHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEEECCCCEEEEEEEEECCHHHHHHHHHHH
IAAVGLFFATALLGRVWCGFACFQTVFTDLFVAVERLLEGDRNSRIKRDSSPMTVDTLMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
KTLKTVIWVLISLAVGIGFILYFYPAPWPAIVDIVTFNAGAAAYGTLAVVGGGCLIMAGY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCHHHHHHEEECCCEEEEECC
AREQVCMYMCPYARFQSAMVDEDSMIVTYEKWRGEPRGKYSRDADFSQRGDCVDCGLCVQ
HHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCEEECCHHEE
VCPTGVDIREGTQLGCIGCGLCVDACNSVMTRFGLPPNLIAYDSITNQNARAEGSSRRIR
CCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEE
LIRPRTLVYSALLLVVIGAMAASLATRSRLDISVLHERSPLFVTMSDGSVRNGYTFKVLN
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEE
MERIDNAFSLTTTGIAGATIEIVGVTKGPVTEANLPVAGDKVGTFRLYVSAPRASLPAPT
HHHCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
NDISFVLINSATGQTQTYKSLFAGPR
CCEEEEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]