| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ywrD [H]
Identifier: 83594647
GI number: 83594647
Start: 3827625
End: 3829229
Strand: Reverse
Name: ywrD [H]
Synonym: Rru_A3318
Alternate gene names: 83594647
Gene position: 3829229-3827625 (Counterclockwise)
Preceding gene: 83594649
Following gene: 83594645
Centisome position: 87.97
GC content: 72.21
Gene sequence:
>1605_bases ATGCTGACCTCCAGGCTGGCCCGGCGCGGCATGGTGAGCGCGCCCCATCATCTGGCGGCCCAGGCGGGGCTTGACATCCT GCGCGAGGGTGGGAACGCCATCGAGGCGATGATCGCCGCCGCCAGCGCCTGCGCGGTTCTTTATCCCCATATGACCGGCA TCGGCGGCGATGGCTTCTGGATCATCCACGAGCCCGGGCGCCCGCCGCTGTCGATCGATGCCAGCGGCGCCGCCGGGGCC GGGGCCAGCCTTGCCGTCTATCGCGAGCGCGGCCTTGCCCGGGTTCCCATCCATGGCGCCCTGGCCGCCTGCACGGTGGC CGGCGCGCTGTCGGGCTGGCAATCGGCGCTTGATGTCTCCAGCCGCTGGGGCGGGCGCCTGCCCTTGTCGCGGCTGCTGG GCGAGGCGGTGGGCTATGCCCGCGACGGCTTCGCCGTCTCCCATTCCCAGGAACGGGCCCTGCGCCGGCTGCTGGGCGGG CTGAAGGATCAGCCGGGCTTCGCCGCCCAGTTCCTTGAAGCCGATGGCCGGGTTCCCCGCGCCGGGGCGCTCCAGCGCAA TCGCCCCCTGGCCGAGACCCTGGAAACCCTGGCGGCGGACGGACTTGACAGCTTTTATCGCGGCGAGGTCGGCCAAAAGG TCGCCGCCGCCCTCAAGGCGGTGGGCGCGCCGGTGACCGCGGGCGATCTCGCCCGCCACCGCTCGATCCGCCGGCGGCCC TTGACCCTGGCCCTGGAAAGCGCCGTTCTCCATACCACGCCGCCGCCGACCCAGGGGCTGACGACGCTGATGCTGATCGG CCTGTTCCAACGCGCCGGCTTGCGCGATGCCGAGGGCGCGGCCTTTGTTCACGCCATGGTCGAGGCCGCCAAGGTCGCCT ATCGGGTGCGCGACGCCAAGATCTGCGATCCCCGCCATATGGGCGTTCATCCCGCCACCTATCTCTCGGCCCAGGTCCTT GACGGCCTCGCCGGCGAGATCGCCCAGGGCGGGGGGACGCCGACCCCGGCGCTGAGCGCGGCGGGGGATACGGTGTGGAT GGGCGCCGTGGATGGCGAGGGGCGGGCGGTCAGTTTCAGCCAAAGCCTGTGCCACGCCTTCGGCTCGGGGGTGATGCTCG GCGACACCGGCATCCTGTGGCACAATCGGGGCGTGGCGTTCGCGCTGGGCGACCAGGCGGTCAATCCGCTGGTCCCCGGG CGCAAGCCGATCCACGCCCTCAATCCGCTGCTGGCGCGGCTGCGCGATGGCAGGACCCTGGTGTTCGGCACCATGGGGGG GGATGGCCAGCCGCAAACCCTGGCGGCGATCTTCGCCCGCCATGTGCTGTTTGGCCAGGACCCGCAGGCGGCGATCTCGG CGCCGCGCTGGCTATTGACCGGTGGGCCGGGGGGGCGCGACGGCTTGCCGCTGGCCGCCCTGCGTCTGGAATCGCGCTTC GATCCCCGGGTGGTCGAAGGCCTGCGCGCCCTTGGGCATTGCGTCACCCTGACCGATGCCTTCGACGAGGCGATGGGCCA TGCCGGGGCGCTGATCCGCCATCCCGACGGCACCATCGAAGGCGCCTTCGATCCGCGCTCCGACGGCGGTCTCGCCGGCT GGTGA
Upstream 100 bases:
>100_bases ATCCCTGCGGCGATTTCCGATCAAGAAGGCTGGACGCGCCCCCCGGCGGTCGGGGATTATAAGGATCGTTCAAGGATTTG CCGGGGAGTTTATCCAACCG
Downstream 100 bases:
>100_bases CGGCTCCTTGCCGGGCGGCATAAAAAAATCCCCGGACGCGGGTCCGGGGAGGCTCATGGCGGCAAAACGGCAGAGGCGTC GCGAAACGGCCTCTCAGCGG
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MLTSRLARRGMVSAPHHLAAQAGLDILREGGNAIEAMIAAASACAVLYPHMTGIGGDGFWIIHEPGRPPLSIDASGAAGA GASLAVYRERGLARVPIHGALAACTVAGALSGWQSALDVSSRWGGRLPLSRLLGEAVGYARDGFAVSHSQERALRRLLGG LKDQPGFAAQFLEADGRVPRAGALQRNRPLAETLETLAADGLDSFYRGEVGQKVAAALKAVGAPVTAGDLARHRSIRRRP LTLALESAVLHTTPPPTQGLTTLMLIGLFQRAGLRDAEGAAFVHAMVEAAKVAYRVRDAKICDPRHMGVHPATYLSAQVL DGLAGEIAQGGGTPTPALSAAGDTVWMGAVDGEGRAVSFSQSLCHAFGSGVMLGDTGILWHNRGVAFALGDQAVNPLVPG RKPIHALNPLLARLRDGRTLVFGTMGGDGQPQTLAAIFARHVLFGQDPQAAISAPRWLLTGGPGGRDGLPLAALRLESRF DPRVVEGLRALGHCVTLTDAFDEAMGHAGALIRHPDGTIEGAFDPRSDGGLAGW
Sequences:
>Translated_534_residues MLTSRLARRGMVSAPHHLAAQAGLDILREGGNAIEAMIAAASACAVLYPHMTGIGGDGFWIIHEPGRPPLSIDASGAAGA GASLAVYRERGLARVPIHGALAACTVAGALSGWQSALDVSSRWGGRLPLSRLLGEAVGYARDGFAVSHSQERALRRLLGG LKDQPGFAAQFLEADGRVPRAGALQRNRPLAETLETLAADGLDSFYRGEVGQKVAAALKAVGAPVTAGDLARHRSIRRRP LTLALESAVLHTTPPPTQGLTTLMLIGLFQRAGLRDAEGAAFVHAMVEAAKVAYRVRDAKICDPRHMGVHPATYLSAQVL DGLAGEIAQGGGTPTPALSAAGDTVWMGAVDGEGRAVSFSQSLCHAFGSGVMLGDTGILWHNRGVAFALGDQAVNPLVPG RKPIHALNPLLARLRDGRTLVFGTMGGDGQPQTLAAIFARHVLFGQDPQAAISAPRWLLTGGPGGRDGLPLAALRLESRF DPRVVEGLRALGHCVTLTDAFDEAMGHAGALIRHPDGTIEGAFDPRSDGGLAGW >Mature_534_residues MLTSRLARRGMVSAPHHLAAQAGLDILREGGNAIEAMIAAASACAVLYPHMTGIGGDGFWIIHEPGRPPLSIDASGAAGA GASLAVYRERGLARVPIHGALAACTVAGALSGWQSALDVSSRWGGRLPLSRLLGEAVGYARDGFAVSHSQERALRRLLGG LKDQPGFAAQFLEADGRVPRAGALQRNRPLAETLETLAADGLDSFYRGEVGQKVAAALKAVGAPVTAGDLARHRSIRRRP LTLALESAVLHTTPPPTQGLTTLMLIGLFQRAGLRDAEGAAFVHAMVEAAKVAYRVRDAKICDPRHMGVHPATYLSAQVL DGLAGEIAQGGGTPTPALSAAGDTVWMGAVDGEGRAVSFSQSLCHAFGSGVMLGDTGILWHNRGVAFALGDQAVNPLVPG RKPIHALNPLLARLRDGRTLVFGTMGGDGQPQTLAAIFARHVLFGQDPQAAISAPRWLLTGGPGGRDGLPLAALRLESRF DPRVVEGLRALGHCVTLTDAFDEAMGHAGALIRHPDGTIEGAFDPRSDGGLAGW
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=552, Percent_Identity=25.9057971014493, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI73915090, Length=552, Percent_Identity=25.9057971014493, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI73915096, Length=552, Percent_Identity=25.9057971014493, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI73915094, Length=552, Percent_Identity=25.9057971014493, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI113429324, Length=553, Percent_Identity=25.1356238698011, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI113429326, Length=556, Percent_Identity=24.6402877697842, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI109148539, Length=533, Percent_Identity=25.703564727955, Blast_Score=93, Evalue=8e-19, Organism=Homo sapiens, GI153266885, Length=551, Percent_Identity=24.6823956442831, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI153266901, Length=552, Percent_Identity=24.6376811594203, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI153266907, Length=551, Percent_Identity=25.0453720508167, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1789856, Length=554, Percent_Identity=27.4368231046931, Blast_Score=190, Evalue=2e-49, Organism=Caenorhabditis elegans, GI193208245, Length=513, Percent_Identity=23.7816764132554, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI193208247, Length=513, Percent_Identity=23.7816764132554, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17506189, Length=484, Percent_Identity=24.3801652892562, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI18859893, Length=533, Percent_Identity=26.6416510318949, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI161077880, Length=554, Percent_Identity=23.6462093862816, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI161077878, Length=554, Percent_Identity=23.6462093862816, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24642670, Length=554, Percent_Identity=23.6462093862816, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24642666, Length=554, Percent_Identity=23.6462093862816, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI45551474, Length=554, Percent_Identity=23.6462093862816, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI161077496, Length=463, Percent_Identity=23.5421166306695, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 55520; Mature: 55520
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSRLARRGMVSAPHHLAAQAGLDILREGGNAIEAMIAAASACAVLYPHMTGIGGDGFW CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IIHEPGRPPLSIDASGAAGAGASLAVYRERGLARVPIHGALAACTVAGALSGWQSALDVS EEECCCCCCEEEECCCCCCCCCEEEEHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH SRWGGRLPLSRLLGEAVGYARDGFAVSHSQERALRRLLGGLKDQPGFAAQFLEADGRVPR HCCCCCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC AGALQRNRPLAETLETLAADGLDSFYRGEVGQKVAAALKAVGAPVTAGDLARHRSIRRRP CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC LTLALESAVLHTTPPPTQGLTTLMLIGLFQRAGLRDAEGAAFVHAMVEAAKVAYRVRDAK CEEEEHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC ICDPRHMGVHPATYLSAQVLDGLAGEIAQGGGTPTPALSAAGDTVWMGAVDGEGRAVSFS CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHH QSLCHAFGSGVMLGDTGILWHNRGVAFALGDQAVNPLVPGRKPIHALNPLLARLRDGRTL HHHHHHHCCCEEECCCEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE VFGTMGGDGQPQTLAAIFARHVLFGQDPQAAISAPRWLLTGGPGGRDGLPLAALRLESRF EEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCC DPRVVEGLRALGHCVTLTDAFDEAMGHAGALIRHPDGTIEGAFDPRSDGGLAGW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MLTSRLARRGMVSAPHHLAAQAGLDILREGGNAIEAMIAAASACAVLYPHMTGIGGDGFW CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IIHEPGRPPLSIDASGAAGAGASLAVYRERGLARVPIHGALAACTVAGALSGWQSALDVS EEECCCCCCEEEECCCCCCCCCEEEEHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH SRWGGRLPLSRLLGEAVGYARDGFAVSHSQERALRRLLGGLKDQPGFAAQFLEADGRVPR HCCCCCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC AGALQRNRPLAETLETLAADGLDSFYRGEVGQKVAAALKAVGAPVTAGDLARHRSIRRRP CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC LTLALESAVLHTTPPPTQGLTTLMLIGLFQRAGLRDAEGAAFVHAMVEAAKVAYRVRDAK CEEEEHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC ICDPRHMGVHPATYLSAQVLDGLAGEIAQGGGTPTPALSAAGDTVWMGAVDGEGRAVSFS CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHH QSLCHAFGSGVMLGDTGILWHNRGVAFALGDQAVNPLVPGRKPIHALNPLLARLRDGRTL HHHHHHHCCCEEECCCEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE VFGTMGGDGQPQTLAAIFARHVLFGQDPQAAISAPRWLLTGGPGGRDGLPLAALRLESRF EEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCC DPRVVEGLRALGHCVTLTDAFDEAMGHAGALIRHPDGTIEGAFDPRSDGGLAGW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]