| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594631
Identifier: 83594631
GI number: 83594631
Start: 3799425
End: 3800699
Strand: Direct
Name: 83594631
Synonym: Rru_A3301
Alternate gene names: NA
Gene position: 3799425-3800699 (Clockwise)
Preceding gene: 83594630
Following gene: 83594632
Centisome position: 87.29
GC content: 67.61
Gene sequence:
>1275_bases ATGACCCTATCGCCCCCTCCGGTCACCCTGTCGGCCGAGGATGACGCCCTGCTTGATCTCGTCCAGCGCCAGAGCCTGCG CTTTTTCGACGAGGGCGGTCATCCGGTCAGCGGTCTGGCCCGCGATCGCAGCTTTATCGACCGCGACCCGGCCAATGATC TGGTCTGCGCCGGCGGATCGGGTTTCGGGGCGATGGCCTTCGTCGTCGCCGTCGAACGCGGCTGGATCGCCCGGGGCGCC GCCGTCGAACGCTTGAGCGCGATGGTCGAAACCCTGGGGCGGGCGGCCTGCCACCACGGCATGCTTCCCCATTTCCTTGA CGGTCGCACCGGCGACACCATTCCCTTCAGCCCGCAAGACAACGGCGGCGATGTGGTGGAAACGGCGCTGGCCCTTCAGG GCTTTCTCTGCGCGCGCGCCTATTTCAACGGCGAGGATGCCAAGGAACGCGCCTTGGCCGAGGCGATCACCGCGCTCTAT GCCGCGGCCGAATGGGATTTCTATACCCAGGGCCGCGAGGTGCTGTATTGGCACTGGAGCCCGACGTCTGGCTGGGCGCT CAACCACGAGATCCGGGGCTGGAATGAATGCCTGATCGCCTATGTGCTGGCGGCGGGCAGCCCGACCCATCCGATCAAAC CGGCTGTCTATCACCAGGGCTTCGCGGCGGGCCGCGACTTCCGCAATGGCCGGGTCTTCGAGGGCATCGAATTGCCGCTT GGCCCCGAGGGCGGCGGGCCGCTGTTCTTCACCCAGTATTCCTTCTGCGGCCTCGATCCCCGGGGGCTCGCGGACCGCTA CGCCGATTATTGGGAGCAAAACCGCCGCCATACCCTGATCAACTACCGCTATTGCCAACGCAATCCCTTGGGCCACAAGG GCTATGGCGCCGCCTGCTGGGGGCTGACGGCCAGCGATGATCCCGACGGCTACGCCGCCCATGCGCCGACCAACGATACC GGCGTGATCAGCCCGACCGCCGCCCTGTCGGCCTTCCCCTATGCCCCCAACGAGGCGATGGCGGCGCTGCGTCATTTCTC GGGGCCCTTGCGCGACCAGTTGTGGGGGCGCTTCGGCTTCGTCGACGCCTTCTGCCCGTCGCGCGACTGGACGGCCGAGA CCTTCCTGGCCATCGACCAGGGGCCGGTGGTGGCGATGATCGAGAACTTCCGCAGCGGCCTGCTCTGGCGGTTGTTCATG GCCATTCCCGAGGTCCGCGCCGGGCTTCAGGCGCTGGATTTCCGCCTGCCGCCCTCCCCCGCCGCCCGGACCTGA
Upstream 100 bases:
>100_bases CCGACGACCACGCCACCGGCGATGCCGATCGCGACGCGCCGACGGCCGGAGACGACGAGGAAGGCCTTTCCGTTCGTGCT GTTCCCAAGGAGAGCTCGCT
Downstream 100 bases:
>100_bases GCGATGAGCGAGGCGCCTTCGGCCACCGGCCTTGAAGACTGGCTGACCACGCAAATCCCGCGCTCAGCCGAATGGATGCT GAGCGCGGTGTCGCGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MTLSPPPVTLSAEDDALLDLVQRQSLRFFDEGGHPVSGLARDRSFIDRDPANDLVCAGGSGFGAMAFVVAVERGWIARGA AVERLSAMVETLGRAACHHGMLPHFLDGRTGDTIPFSPQDNGGDVVETALALQGFLCARAYFNGEDAKERALAEAITALY AAAEWDFYTQGREVLYWHWSPTSGWALNHEIRGWNECLIAYVLAAGSPTHPIKPAVYHQGFAAGRDFRNGRVFEGIELPL GPEGGGPLFFTQYSFCGLDPRGLADRYADYWEQNRRHTLINYRYCQRNPLGHKGYGAACWGLTASDDPDGYAAHAPTNDT GVISPTAALSAFPYAPNEAMAALRHFSGPLRDQLWGRFGFVDAFCPSRDWTAETFLAIDQGPVVAMIENFRSGLLWRLFM AIPEVRAGLQALDFRLPPSPAART
Sequences:
>Translated_424_residues MTLSPPPVTLSAEDDALLDLVQRQSLRFFDEGGHPVSGLARDRSFIDRDPANDLVCAGGSGFGAMAFVVAVERGWIARGA AVERLSAMVETLGRAACHHGMLPHFLDGRTGDTIPFSPQDNGGDVVETALALQGFLCARAYFNGEDAKERALAEAITALY AAAEWDFYTQGREVLYWHWSPTSGWALNHEIRGWNECLIAYVLAAGSPTHPIKPAVYHQGFAAGRDFRNGRVFEGIELPL GPEGGGPLFFTQYSFCGLDPRGLADRYADYWEQNRRHTLINYRYCQRNPLGHKGYGAACWGLTASDDPDGYAAHAPTNDT GVISPTAALSAFPYAPNEAMAALRHFSGPLRDQLWGRFGFVDAFCPSRDWTAETFLAIDQGPVVAMIENFRSGLLWRLFM AIPEVRAGLQALDFRLPPSPAART >Mature_423_residues TLSPPPVTLSAEDDALLDLVQRQSLRFFDEGGHPVSGLARDRSFIDRDPANDLVCAGGSGFGAMAFVVAVERGWIARGAA VERLSAMVETLGRAACHHGMLPHFLDGRTGDTIPFSPQDNGGDVVETALALQGFLCARAYFNGEDAKERALAEAITALYA AAEWDFYTQGREVLYWHWSPTSGWALNHEIRGWNECLIAYVLAAGSPTHPIKPAVYHQGFAAGRDFRNGRVFEGIELPLG PEGGGPLFFTQYSFCGLDPRGLADRYADYWEQNRRHTLINYRYCQRNPLGHKGYGAACWGLTASDDPDGYAAHAPTNDTG VISPTAALSAFPYAPNEAMAALRHFSGPLRDQLWGRFGFVDAFCPSRDWTAETFLAIDQGPVVAMIENFRSGLLWRLFMA IPEVRAGLQALDFRLPPSPAART
Specific function: Unknown
COG id: COG5368
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46405; Mature: 46273
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSPPPVTLSAEDDALLDLVQRQSLRFFDEGGHPVSGLARDRSFIDRDPANDLVCAGGS CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCC GFGAMAFVVAVERGWIARGAAVERLSAMVETLGRAACHHGMLPHFLDGRTGDTIPFSPQD CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCC NGGDVVETALALQGFLCARAYFNGEDAKERALAEAITALYAAAEWDFYTQGREVLYWHWS CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEC PTSGWALNHEIRGWNECLIAYVLAAGSPTHPIKPAVYHQGFAAGRDFRNGRVFEGIELPL CCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHCCCCCCCCCEECCEECCC GPEGGGPLFFTQYSFCGLDPRGLADRYADYWEQNRRHTLINYRYCQRNPLGHKGYGAACW CCCCCCCEEEEEEHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEE GLTASDDPDGYAAHAPTNDTGVISPTAALSAFPYAPNEAMAALRHFSGPLRDQLWGRFGF CCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC VDAFCPSRDWTAETFLAIDQGPVVAMIENFRSGLLWRLFMAIPEVRAGLQALDFRLPPSP HHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AART CCCC >Mature Secondary Structure TLSPPPVTLSAEDDALLDLVQRQSLRFFDEGGHPVSGLARDRSFIDRDPANDLVCAGGS CCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCC GFGAMAFVVAVERGWIARGAAVERLSAMVETLGRAACHHGMLPHFLDGRTGDTIPFSPQD CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCC NGGDVVETALALQGFLCARAYFNGEDAKERALAEAITALYAAAEWDFYTQGREVLYWHWS CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEC PTSGWALNHEIRGWNECLIAYVLAAGSPTHPIKPAVYHQGFAAGRDFRNGRVFEGIELPL CCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHCCCCCCCCCEECCEECCC GPEGGGPLFFTQYSFCGLDPRGLADRYADYWEQNRRHTLINYRYCQRNPLGHKGYGAACW CCCCCCCEEEEEEHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEE GLTASDDPDGYAAHAPTNDTGVISPTAALSAFPYAPNEAMAALRHFSGPLRDQLWGRFGF CCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC VDAFCPSRDWTAETFLAIDQGPVVAMIENFRSGLLWRLFMAIPEVRAGLQALDFRLPPSP HHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AART CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA