| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is bglX [H]
Identifier: 83594629
GI number: 83594629
Start: 3795220
End: 3797370
Strand: Reverse
Name: bglX [H]
Synonym: Rru_A3299
Alternate gene names: 83594629
Gene position: 3797370-3795220 (Counterclockwise)
Preceding gene: 83594640
Following gene: 83594622
Centisome position: 87.24
GC content: 68.43
Gene sequence:
>2151_bases ATGAACCGCATCGATACGCTCCTTGCCGCCATGACGCTGGAAGAAAAAATCGGTCAGCTGACCATGGCGACAGCGGGTTA TGCAATAACCGGGCCGGTCTTGGGCGGTGACGTGACCGACGGGATCAAGGCCGGCACCATCGGCAGTCTGCTCAATGTCT GGGGAGCCGAAGCCAGCCGGACCATTCAGGCCCTGGCCGTGGAGAACAGCCGGTTGAAGGTGCCGCTGTTCTTTGGCTTC GACGTGGTTCATGGCCACCGGACGGTGTTTCCCATCCCCTTGGCCGAGGCGGCGGCCTTCGATCCGGTTTTGTGGGAGGA GACGGCGCGGGCCAGCGCCGAGGAGGCGGCGGCCGATGGTCTGCATATGACCTTCGCGCCGATGATCGATATCGCCCGCG ATCCGCGCTGGGGGCGCATCGCCGAGGGGCCGGGCGAGGATCCCTGGGTGGGAGCGCGCATGGCCGAGGCCAAGGTGCGC GGCTTCCAGGGCGCCGATCTGGCCGATACCACCCGCGTCTGCGCCACCGCCAAGCATTTCTGCGGCTATGGCGCGGCCAT CGCCGGGCGCGATTACGCCTCGGCCGAAATCTCCCTTCAGACCCTGCACGAGGTTTATCTGCCGCCTTTCGCCGCCGCGG TGAAGGCGGGGGTGGGCGCGGTGATGCCGGCCTTCCACGATATCGGCGGCGTGCCGCTGACCGCCCATATCCCGCTGCTG CGCGACTGGCTGCGCGGCGAGGTGGGCTTTGAAGGGGTGCTGGTCAGCGACTACAACGCCATCGCCGAACTGATCAAGCA CGGGGTGGCGGGAACCCTGGCCGAGGCGGCGGCCTTAGCGCTGAACGCCGGGGTTGATATCGACATGATGGCCACCGCCT ATAGCCGGGGGCTGCCCGAAGCGCTCGAACGCGGTCTGACCGATATGGCCCATATCGACGCCTCGGTGCGCCGGGTGCTG GGTCTCAAGGAGCGGCTGGGGCTGTTTGACGACCCTTACGCCCGCTGTGCTCCGCGTGTCGATGCCGAGGGTGATCGGGC GCGGCGCCTTCTCGCCCGCAAGGCGGCCAGCCGCAGCGTGGTTTTATTGAGCAATCCGGCCAAGATCCTGCCGCTGCCCT CGCGCCTGCACCGGCTGGCCGTGGTCGGTCCCCTGGCCGACTCCCGGGCCGACATGCGCGGGCCGTGGTCGGCCGCCGGC CTGCCCGATGATCCGGTCAGCGTGGTTGAAGGGCTGCGCGATCTTCTGCCCGCCGATAGCATCGCCTTCGCCCCCGGCAT CGATCTGATGGGCAAGGACCTGTCGGGCGAGGAGGCCGCCCTTGATCTGTGCCGGGCGGCCGAGGCGGTGGTGCTGTGTT TGGGCGAGGCGGCGACGATGAGCGGCGAGGCCAATTGCCGGGCCGATCCCGGCCTGCCGGGCCAGCAGCGCGCCTTTGCC GAAAAAGTTTTCGATCTGGGCGTGCCGGTGATCGTCGTGCTGTTCTCCGGCCGGCCGTTGATCCTGCCCTGGCTGATCGA GCGCGCCGATGCGGTGCTCGCCGCCTGGTTCCCCGGCTGCGAAGCCGGGCCGGCCATCGCCGAGGTGCTGCTCGGGCTGA GCGATCCCGGCGGGCGCCTGCCGGTCAGTTGGCCGCGCCATGTCGGGCAGGTGCCGCTGTTCTTCGGGGCGCGTTCGGGC GGGCGCCCGGAAAACCCCGAAGACCACTACACCAGCAAATACATGGACATGCCCAATACGCCGCAGTTCCCCTTCGGTCA TGGGCTGTCCTATGGCGACTTCGCTTTGGAGGCTTTGACCGTTGGCCCCGACGAGGTGAGCGCCGACGGGGTCATCGAGG TGACGGTCAGTCTGATCAACAAGGGCGGGCGCCCGGGCTTGGGCTGCGTTTTCCTGTTCATCCATGATCCGGTCGCCTCG GTGGCCCGCCCGCTTCTTGAGCTCAAGGGCGTTCTTCGGGCCGAGGTCGAGGCCGGTGGACGCTGTGAGCTGCGCTGGAG CCTGCCGGTGGCCGATCTGGCCTTTCTTGGCGCCGATCTGACGCCAAGGATCGAAGCCGGGGTGATCGAGATCGCCGTCG GCCGCAGCGCCGACCCCGAGGGGCTGCTGCGCCGGTCCGTGCGTATCCTCACCCCCCGGCACCAGGGGTGA
Upstream 100 bases:
>100_bases GAGCCGGTCGGGACGTGTCTTTGACGTGTCTTTATAGTGGGGACGCAAGCATTAGGGCGCTAAGATTACCCTGGGTTTGA ACCGCCAAGCGAGATTTTCC
Downstream 100 bases:
>100_bases GAAGAGGGAGCAAGCCCCCGGAGCAATTGGCGTGAACCGCGTTTCACGCCAATTGCTCTAGCCGGGAAAGACCACGCCGG CGCCAACGAACAGCGCAAGG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MNRIDTLLAAMTLEEKIGQLTMATAGYAITGPVLGGDVTDGIKAGTIGSLLNVWGAEASRTIQALAVENSRLKVPLFFGF DVVHGHRTVFPIPLAEAAAFDPVLWEETARASAEEAAADGLHMTFAPMIDIARDPRWGRIAEGPGEDPWVGARMAEAKVR GFQGADLADTTRVCATAKHFCGYGAAIAGRDYASAEISLQTLHEVYLPPFAAAVKAGVGAVMPAFHDIGGVPLTAHIPLL RDWLRGEVGFEGVLVSDYNAIAELIKHGVAGTLAEAAALALNAGVDIDMMATAYSRGLPEALERGLTDMAHIDASVRRVL GLKERLGLFDDPYARCAPRVDAEGDRARRLLARKAASRSVVLLSNPAKILPLPSRLHRLAVVGPLADSRADMRGPWSAAG LPDDPVSVVEGLRDLLPADSIAFAPGIDLMGKDLSGEEAALDLCRAAEAVVLCLGEAATMSGEANCRADPGLPGQQRAFA EKVFDLGVPVIVVLFSGRPLILPWLIERADAVLAAWFPGCEAGPAIAEVLLGLSDPGGRLPVSWPRHVGQVPLFFGARSG GRPENPEDHYTSKYMDMPNTPQFPFGHGLSYGDFALEALTVGPDEVSADGVIEVTVSLINKGGRPGLGCVFLFIHDPVAS VARPLLELKGVLRAEVEAGGRCELRWSLPVADLAFLGADLTPRIEAGVIEIAVGRSADPEGLLRRSVRILTPRHQG
Sequences:
>Translated_716_residues MNRIDTLLAAMTLEEKIGQLTMATAGYAITGPVLGGDVTDGIKAGTIGSLLNVWGAEASRTIQALAVENSRLKVPLFFGF DVVHGHRTVFPIPLAEAAAFDPVLWEETARASAEEAAADGLHMTFAPMIDIARDPRWGRIAEGPGEDPWVGARMAEAKVR GFQGADLADTTRVCATAKHFCGYGAAIAGRDYASAEISLQTLHEVYLPPFAAAVKAGVGAVMPAFHDIGGVPLTAHIPLL RDWLRGEVGFEGVLVSDYNAIAELIKHGVAGTLAEAAALALNAGVDIDMMATAYSRGLPEALERGLTDMAHIDASVRRVL GLKERLGLFDDPYARCAPRVDAEGDRARRLLARKAASRSVVLLSNPAKILPLPSRLHRLAVVGPLADSRADMRGPWSAAG LPDDPVSVVEGLRDLLPADSIAFAPGIDLMGKDLSGEEAALDLCRAAEAVVLCLGEAATMSGEANCRADPGLPGQQRAFA EKVFDLGVPVIVVLFSGRPLILPWLIERADAVLAAWFPGCEAGPAIAEVLLGLSDPGGRLPVSWPRHVGQVPLFFGARSG GRPENPEDHYTSKYMDMPNTPQFPFGHGLSYGDFALEALTVGPDEVSADGVIEVTVSLINKGGRPGLGCVFLFIHDPVAS VARPLLELKGVLRAEVEAGGRCELRWSLPVADLAFLGADLTPRIEAGVIEIAVGRSADPEGLLRRSVRILTPRHQG >Mature_716_residues MNRIDTLLAAMTLEEKIGQLTMATAGYAITGPVLGGDVTDGIKAGTIGSLLNVWGAEASRTIQALAVENSRLKVPLFFGF DVVHGHRTVFPIPLAEAAAFDPVLWEETARASAEEAAADGLHMTFAPMIDIARDPRWGRIAEGPGEDPWVGARMAEAKVR GFQGADLADTTRVCATAKHFCGYGAAIAGRDYASAEISLQTLHEVYLPPFAAAVKAGVGAVMPAFHDIGGVPLTAHIPLL RDWLRGEVGFEGVLVSDYNAIAELIKHGVAGTLAEAAALALNAGVDIDMMATAYSRGLPEALERGLTDMAHIDASVRRVL GLKERLGLFDDPYARCAPRVDAEGDRARRLLARKAASRSVVLLSNPAKILPLPSRLHRLAVVGPLADSRADMRGPWSAAG LPDDPVSVVEGLRDLLPADSIAFAPGIDLMGKDLSGEEAALDLCRAAEAVVLCLGEAATMSGEANCRADPGLPGQQRAFA EKVFDLGVPVIVVLFSGRPLILPWLIERADAVLAAWFPGCEAGPAIAEVLLGLSDPGGRLPVSWPRHVGQVPLFFGARSG GRPENPEDHYTSKYMDMPNTPQFPFGHGLSYGDFALEALTVGPDEVSADGVIEVTVSLINKGGRPGLGCVFLFIHDPVAS VARPLLELKGVLRAEVEAGGRCELRWSLPVADLAFLGADLTPRIEAGVIEIAVGRSADPEGLLRRSVRILTPRHQG
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=722, Percent_Identity=38.0886426592798, Blast_Score=493, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 75693; Mature: 75693
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIDTLLAAMTLEEKIGQLTMATAGYAITGPVLGGDVTDGIKAGTIGSLLNVWGAEASR CCHHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHH TIQALAVENSRLKVPLFFGFDVVHGHRTVFPIPLAEAAAFDPVLWEETARASAEEAAADG HEEEEEECCCCEEEEEEECCEEECCCCEEECCCCHHHHHCCCHHHHHHHHCCHHHHHHCC LHMTFAPMIDIARDPRWGRIAEGPGEDPWVGARMAEAKVRGFQGADLADTTRVCATAKHF CEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH CGYGAAIAGRDYASAEISLQTLHEVYLPPFAAAVKAGVGAVMPAFHDIGGVPLTAHIPLL HCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCEECCHHH RDWLRGEVGFEGVLVSDYNAIAELIKHGVAGTLAEAAALALNAGVDIDMMATAYSRGLPE HHHHCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH ALERGLTDMAHIDASVRRVLGLKERLGLFDDPYARCAPRVDAEGDRARRLLARKAASRSV HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCEE VLLSNPAKILPLPSRLHRLAVVGPLADSRADMRGPWSAAGLPDDPVSVVEGLRDLLPADS EEEECCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC IAFAPGIDLMGKDLSGEEAALDLCRAAEAVVLCLGEAATMSGEANCRADPGLPGQQRAFA EEECCCCHHCCCCCCCHHHHHHHHHHHHHHHEEECCHHCCCCCCCCCCCCCCCCHHHHHH EKVFDLGVPVIVVLFSGRPLILPWLIERADAVLAAWFPGCEAGPAIAEVLLGLSDPGGRL HHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCCCC PVSWPRHVGQVPLFFGARSGGRPENPEDHYTSKYMDMPNTPQFPFGHGLSYGDFALEALT CCCCHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEEE VGPDEVSADGVIEVTVSLINKGGRPGLGCVFLFIHDPVASVARPLLELKGVLRAEVEAGG CCCCCCCCCCHHEEEHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC RCELRWSLPVADLAFLGADLTPRIEAGVIEIAVGRSADPEGLLRRSVRILTPRHQG EEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHEECCCCCC >Mature Secondary Structure MNRIDTLLAAMTLEEKIGQLTMATAGYAITGPVLGGDVTDGIKAGTIGSLLNVWGAEASR CCHHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHH TIQALAVENSRLKVPLFFGFDVVHGHRTVFPIPLAEAAAFDPVLWEETARASAEEAAADG HEEEEEECCCCEEEEEEECCEEECCCCEEECCCCHHHHHCCCHHHHHHHHCCHHHHHHCC LHMTFAPMIDIARDPRWGRIAEGPGEDPWVGARMAEAKVRGFQGADLADTTRVCATAKHF CEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH CGYGAAIAGRDYASAEISLQTLHEVYLPPFAAAVKAGVGAVMPAFHDIGGVPLTAHIPLL HCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCEECCHHH RDWLRGEVGFEGVLVSDYNAIAELIKHGVAGTLAEAAALALNAGVDIDMMATAYSRGLPE HHHHCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH ALERGLTDMAHIDASVRRVLGLKERLGLFDDPYARCAPRVDAEGDRARRLLARKAASRSV HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCEE VLLSNPAKILPLPSRLHRLAVVGPLADSRADMRGPWSAAGLPDDPVSVVEGLRDLLPADS EEEECCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC IAFAPGIDLMGKDLSGEEAALDLCRAAEAVVLCLGEAATMSGEANCRADPGLPGQQRAFA EEECCCCHHCCCCCCCHHHHHHHHHHHHHHHEEECCHHCCCCCCCCCCCCCCCCHHHHHH EKVFDLGVPVIVVLFSGRPLILPWLIERADAVLAAWFPGCEAGPAIAEVLLGLSDPGGRL HHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCCCC PVSWPRHVGQVPLFFGARSGGRPENPEDHYTSKYMDMPNTPQFPFGHGLSYGDFALEALT CCCCHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEEE VGPDEVSADGVIEVTVSLINKGGRPGLGCVFLFIHDPVASVARPLLELKGVLRAEVEAGG CCCCCCCCCCHHEEEHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC RCELRWSLPVADLAFLGADLTPRIEAGVIEIAVGRSADPEGLLRRSVRILTPRHQG EEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]