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The map label for this gene is yafS [C]

Identifier: 83594599

GI number: 83594599

Start: 3767646

End: 3768440

Strand: Reverse

Name: yafS [C]

Synonym: Rru_A3269

Alternate gene names: 83594599

Gene position: 3768440-3767646 (Counterclockwise)

Preceding gene: 83594602

Following gene: 83594595

Centisome position: 86.57

GC content: 67.8

Gene sequence:

>795_bases
ATGATCGGCCCCATGTGGAGCGATGTCATCGATCTTAGGGACTTTTACGCCACCAGCCAGGGGCAGCTTACCCGCCGGCT
GATTGGCCGGTCCCTGCGCGCCCTGTGGCCCGAGGTGAGGGGATGCAGGGTCTTGGGCCTGGGCTATGCGGTGCCCTTCC
TTCAACCCTTTGCCGATGAGGCCGAGCGGGTGGTGGCGATGATGCCCGCGCCGATGGGCGCGGTGCGCTGGCCCTCGGTC
GGGCCGGTGCAAGGCGCCCTGGCCGACGAGTTGGAGCTGCCGTTGCCCGATCGCTCGATCGATCGGCTGCTGCTGATCCA
CGGCCTGGAATTCGCCGATCACGCCCATGGTCTGCTGCGCGAATGCTGGCGGGTGCTGGCCGATAACGGCCGGCTGATGG
TGGTGGTGCCCAATCGCCGGGCCACCTGGGCGCGGATGGAACGCTCGCCCTTCGCCAATGGCCAGCCCTATTCCGAGGGC
CAATTGACCCGCCTGCTGCGCGACCGGTTGTTCACGCCGATCGCCTCGTCCACCGCCTTGTTCATGCCGCCAAGCCGCTC
GCGCATGGTGATGGGCTCGGCCAGCCTGCTCGAACAAATCGGCTGCCGATTGTTTCCGGCGTTCGGTGGGGTGGTGGTGG
TCGATTGCGCCAAGCAGATCGCCGCTCCGGTGCTGCGTAGCGCCGTGGCGTCGCGGCGGGTCTATGTCGGGGTCGGGCTG
TCCCAGCCCCTTCAAGGCAGTTCGCGCGCGGGCTTCAAGAACCCGGCCCCCTTCACGGGTGTGGACGGAAGCTGA

Upstream 100 bases:

>100_bases
GGGATCGTTCCGCCGCCCGTTTCGCGCGATGCGCCCAACCCGGCTCACGCGCTTTCCATGTGGGGTTATTGATCCGCTCC
GCAAGCGCGCGACCTCTGCT

Downstream 100 bases:

>100_bases
GCGGGCCGTCGTCCGCCCCCACGATCTCGCCGATCAACCGGCCGGGGGAGGGGGGAAGGCGGGCGCCGTCCAGGCCATCG
GTTAGGGTAAGCGCGCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MIGPMWSDVIDLRDFYATSQGQLTRRLIGRSLRALWPEVRGCRVLGLGYAVPFLQPFADEAERVVAMMPAPMGAVRWPSV
GPVQGALADELELPLPDRSIDRLLLIHGLEFADHAHGLLRECWRVLADNGRLMVVVPNRRATWARMERSPFANGQPYSEG
QLTRLLRDRLFTPIASSTALFMPPSRSRMVMGSASLLEQIGCRLFPAFGGVVVVDCAKQIAAPVLRSAVASRRVYVGVGL
SQPLQGSSRAGFKNPAPFTGVDGS

Sequences:

>Translated_264_residues
MIGPMWSDVIDLRDFYATSQGQLTRRLIGRSLRALWPEVRGCRVLGLGYAVPFLQPFADEAERVVAMMPAPMGAVRWPSV
GPVQGALADELELPLPDRSIDRLLLIHGLEFADHAHGLLRECWRVLADNGRLMVVVPNRRATWARMERSPFANGQPYSEG
QLTRLLRDRLFTPIASSTALFMPPSRSRMVMGSASLLEQIGCRLFPAFGGVVVVDCAKQIAAPVLRSAVASRRVYVGVGL
SQPLQGSSRAGFKNPAPFTGVDGS
>Mature_264_residues
MIGPMWSDVIDLRDFYATSQGQLTRRLIGRSLRALWPEVRGCRVLGLGYAVPFLQPFADEAERVVAMMPAPMGAVRWPSV
GPVQGALADELELPLPDRSIDRLLLIHGLEFADHAHGLLRECWRVLADNGRLMVVVPNRRATWARMERSPFANGQPYSEG
QLTRLLRDRLFTPIASSTALFMPPSRSRMVMGSASLLEQIGCRLFPAFGGVVVVDCAKQIAAPVLRSAVASRRVYVGVGL
SQPLQGSSRAGFKNPAPFTGVDGS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28879; Mature: 28879

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGPMWSDVIDLRDFYATSQGQLTRRLIGRSLRALWPEVRGCRVLGLGYAVPFLQPFADE
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
AERVVAMMPAPMGAVRWPSVGPVQGALADELELPLPDRSIDRLLLIHGLEFADHAHGLLR
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
ECWRVLADNGRLMVVVPNRRATWARMERSPFANGQPYSEGQLTRLLRDRLFTPIASSTAL
HHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEE
FMPPSRSRMVMGSASLLEQIGCRLFPAFGGVVVVDCAKQIAAPVLRSAVASRRVYVGVGL
EECCCCCEEEECHHHHHHHHCCEEEHHCCCEEEEHHHHHHHHHHHHHHHHHCEEEEECCC
SQPLQGSSRAGFKNPAPFTGVDGS
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGPMWSDVIDLRDFYATSQGQLTRRLIGRSLRALWPEVRGCRVLGLGYAVPFLQPFADE
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
AERVVAMMPAPMGAVRWPSVGPVQGALADELELPLPDRSIDRLLLIHGLEFADHAHGLLR
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
ECWRVLADNGRLMVVVPNRRATWARMERSPFANGQPYSEGQLTRLLRDRLFTPIASSTAL
HHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEE
FMPPSRSRMVMGSASLLEQIGCRLFPAFGGVVVVDCAKQIAAPVLRSAVASRRVYVGVGL
EECCCCCEEEECHHHHHHHHCCEEEHHCCCEEEEHHHHHHHHHHHHHHHHHCEEEEECCC
SQPLQGSSRAGFKNPAPFTGVDGS
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6209404 [H]