| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594586
Identifier: 83594586
GI number: 83594586
Start: 3752174
End: 3752854
Strand: Direct
Name: 83594586
Synonym: Rru_A3256
Alternate gene names: NA
Gene position: 3752174-3752854 (Clockwise)
Preceding gene: 83594585
Following gene: 83594587
Centisome position: 86.2
GC content: 66.96
Gene sequence:
>681_bases ATGGGGAAGGTGGCGCGACGACTGGGTCTTCTGGCCCTGACGGCATTCGGACTATGGCTGGCGGGGCTTGCGCTCTTCGC CTCCACGGTGCTGCCTTCGGCCATCGAGGACGATCAGACGACCACCGATGCCATCGTCGTGCTGACCGGCGGCTCGGAAC GCCTGCCCGTCGGCCTGGACCTGCTGGCCCGTGGCCTGGGGCGCAAGCTGTTCTTGTCGGGGGTCGGCGTGGAAGTCACC CTAGACGACCTGCGCGCCGCCATCGTCGATGTGCCCGAGAACCTGCGGAGCCGGGTGGTGCTCGGCCATGCGGCCCTTGA TACGGTCGGCAATGCCGAGGAAACCGCCCATTGGCTGGCGACGGAACATTTCACCAGCCTGCGTCTGGTCACCGCCGCCT ATCACATGCCGCGCAGTCTGGTGGAATTCCGCGCCGCCATGCCCGATGTGCGGATCATCGCCCATCCGGTTTTTCCCGGC TCGGTCAAGCAGCAGGAATGGTGGATGTGGAAAGGCACGGCGCGCTTGATGGCCGAGGAATACAGCAAATTCCTGGTCGC CTGGCTGCGCCGGACCCTGTCGCCGGTCAATGTCGAGGCTTTGGCCGCGCCGCTGTTTCCGCCCCCGGTCGGGCCGTCGT CTTCCACCCCCTCCCCCTCCTCCACCGGCGAGACCCGATGA
Upstream 100 bases:
>100_bases AGCTTCGGCGGGCCGCGAGGTATGACGGCGGCCTTGGCAGGTCGCAGGGAAAGACAGCCCCCACTGCGGGTGGCGGGAAA CGGGACGGAACGATTCGAGA
Downstream 100 bases:
>100_bases TGGCCCTAGCGCGCTCCGTTCTTTTCAATATTTTCTATCTCGGCTGGACGATCACCATGGGCGTCCTGTTCGTCCCCGTC CTGGCCTTTCGCGCCCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MGKVARRLGLLALTAFGLWLAGLALFASTVLPSAIEDDQTTTDAIVVLTGGSERLPVGLDLLARGLGRKLFLSGVGVEVT LDDLRAAIVDVPENLRSRVVLGHAALDTVGNAEETAHWLATEHFTSLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPVFPG SVKQQEWWMWKGTARLMAEEYSKFLVAWLRRTLSPVNVEALAAPLFPPPVGPSSSTPSPSSTGETR
Sequences:
>Translated_226_residues MGKVARRLGLLALTAFGLWLAGLALFASTVLPSAIEDDQTTTDAIVVLTGGSERLPVGLDLLARGLGRKLFLSGVGVEVT LDDLRAAIVDVPENLRSRVVLGHAALDTVGNAEETAHWLATEHFTSLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPVFPG SVKQQEWWMWKGTARLMAEEYSKFLVAWLRRTLSPVNVEALAAPLFPPPVGPSSSTPSPSSTGETR >Mature_225_residues GKVARRLGLLALTAFGLWLAGLALFASTVLPSAIEDDQTTTDAIVVLTGGSERLPVGLDLLARGLGRKLFLSGVGVEVTL DDLRAAIVDVPENLRSRVVLGHAALDTVGNAEETAHWLATEHFTSLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPVFPGS VKQQEWWMWKGTARLMAEEYSKFLVAWLRRTLSPVNVEALAAPLFPPPVGPSSSTPSPSSTGETR
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24387; Mature: 24256
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVARRLGLLALTAFGLWLAGLALFASTVLPSAIEDDQTTTDAIVVLTGGSERLPVGLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCCCCCCCHH LLARGLGRKLFLSGVGVEVTLDDLRAAIVDVPENLRSRVVLGHAALDTVGNAEETAHWLA HHHHHCCCCEEEECCCEEEEHHHHHHHHHCCCHHHHHHEEECHHHHHHCCCHHHHHHHHH TEHFTSLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPVFPGSVKQQEWWMWKGTARLMAEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEEEHHHHHHHHHH YSKFLVAWLRRTLSPVNVEALAAPLFPPPVGPSSSTPSPSSTGETR HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GKVARRLGLLALTAFGLWLAGLALFASTVLPSAIEDDQTTTDAIVVLTGGSERLPVGLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCCCCCCCHH LLARGLGRKLFLSGVGVEVTLDDLRAAIVDVPENLRSRVVLGHAALDTVGNAEETAHWLA HHHHHCCCCEEEECCCEEEEHHHHHHHHHCCCHHHHHHEEECHHHHHHCCCHHHHHHHHH TEHFTSLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPVFPGSVKQQEWWMWKGTARLMAEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEEEHHHHHHHHHH YSKFLVAWLRRTLSPVNVEALAAPLFPPPVGPSSSTPSPSSTGETR HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA