| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594579
Identifier: 83594579
GI number: 83594579
Start: 3745184
End: 3745837
Strand: Reverse
Name: 83594579
Synonym: Rru_A3249
Alternate gene names: NA
Gene position: 3745837-3745184 (Counterclockwise)
Preceding gene: 83594580
Following gene: 83594578
Centisome position: 86.06
GC content: 65.44
Gene sequence:
>654_bases GTGCCCACGGCCCGGCTTCGGGCATTCAGCTTTCCCAAGGAGGATTTCGCGTTGCCCCAGTTTCTCCGTCCGCTGTTTCT GGCCGCCGCCCTGGTCGCCGGGATCGCCGCCCCCGGCCTTGCGGCCTCGATACCCTATAGCGAACGCGCCCTGGGTTCGC CCGACGCCAAGGTGACCATCGTCGAGTATTCCTCGCTGCTCTGCCCCCATTGCGCCGATTTCCACACCCAGATCCTGCCC GAGCTGAAAAAAGAGTATATCGATACGGGCAAGGTGCGGCTGGTCTTCAAGGACCATTCCCTGGGGCAACCCCTGGCCGT CGGCGCTTCGGTGATCGCCCGCTGCGCGCCCGAGCAGAATTTCTTCCCGCTGATCACCACGCTGTTTGCCAATCAGCGGA CCTGGGCGACGGCGAAGGATCCCTTGGCCGCCCTTCAGGGCTATGCCGCCCTGGCCGGCATGGACAAAGCCGCCGTCGAG GCCTGCCTGGATAATCAGGATGTCTTCAACGGCGTGCAGGCGGGCGAGGCCGAGGCCGGGCGCATCGGTGTCGAATCGAC CCCCAGCTTCGTCATCGACGGCAAACCCGTTCTGGTCGGCGCCCAGCCGATCGAGGCCTTCCGCAAGGTTCTCGATCCCT TGGTCGGCGGCTGA
Upstream 100 bases:
>100_bases CGGCCGGCTGGAGGCCGGGCGCAGCCGGCGCCGTCCCGGCTAAGGGGCGGCAAGGCGGCCGCGCGCCGGCGCTTGTGGCG CGGGAGCGCGGCTTTATATA
Downstream 100 bases:
>100_bases GGCGGGCGGGCTTGCTGCATTTCACCCGGTTGCGTCTGGTCGGCTTCAAATCCTTTGTCGAGCCGGCCGAATTGATGATC GAACCGGGGCTGACCGGTGT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPTARLRAFSFPKEDFALPQFLRPLFLAAALVAGIAAPGLAASIPYSERALGSPDAKVTIVEYSSLLCPHCADFHTQILP ELKKEYIDTGKVRLVFKDHSLGQPLAVGASVIARCAPEQNFFPLITTLFANQRTWATAKDPLAALQGYAALAGMDKAAVE ACLDNQDVFNGVQAGEAEAGRIGVESTPSFVIDGKPVLVGAQPIEAFRKVLDPLVGG
Sequences:
>Translated_217_residues MPTARLRAFSFPKEDFALPQFLRPLFLAAALVAGIAAPGLAASIPYSERALGSPDAKVTIVEYSSLLCPHCADFHTQILP ELKKEYIDTGKVRLVFKDHSLGQPLAVGASVIARCAPEQNFFPLITTLFANQRTWATAKDPLAALQGYAALAGMDKAAVE ACLDNQDVFNGVQAGEAEAGRIGVESTPSFVIDGKPVLVGAQPIEAFRKVLDPLVGG >Mature_216_residues PTARLRAFSFPKEDFALPQFLRPLFLAAALVAGIAAPGLAASIPYSERALGSPDAKVTIVEYSSLLCPHCADFHTQILPE LKKEYIDTGKVRLVFKDHSLGQPLAVGASVIARCAPEQNFFPLITTLFANQRTWATAKDPLAALQGYAALAGMDKAAVEA CLDNQDVFNGVQAGEAEAGRIGVESTPSFVIDGKPVLVGAQPIEAFRKVLDPLVGG
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23035; Mature: 22904
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTARLRAFSFPKEDFALPQFLRPLFLAAALVAGIAAPGLAASIPYSERALGSPDAKVTI CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEE VEYSSLLCPHCADFHTQILPELKKEYIDTGKVRLVFKDHSLGQPLAVGASVIARCAPEQN EEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC FFPLITTLFANQRTWATAKDPLAALQGYAALAGMDKAAVEACLDNQDVFNGVQAGEAEAG CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCHHCCCCCCC RIGVESTPSFVIDGKPVLVGAQPIEAFRKVLDPLVGG CCCCCCCCCEEECCCEEEEECHHHHHHHHHHHHHCCC >Mature Secondary Structure PTARLRAFSFPKEDFALPQFLRPLFLAAALVAGIAAPGLAASIPYSERALGSPDAKVTI CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEE VEYSSLLCPHCADFHTQILPELKKEYIDTGKVRLVFKDHSLGQPLAVGASVIARCAPEQN EEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC FFPLITTLFANQRTWATAKDPLAALQGYAALAGMDKAAVEACLDNQDVFNGVQAGEAEAG CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCHHCCCCCCC RIGVESTPSFVIDGKPVLVGAQPIEAFRKVLDPLVGG CCCCCCCCCEEECCCEEEEECHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA