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The map label for this gene is elbB [H]

Identifier: 83594561

GI number: 83594561

Start: 3725576

End: 3726259

Strand: Reverse

Name: elbB [H]

Synonym: Rru_A3231

Alternate gene names: 83594561

Gene position: 3726259-3725576 (Counterclockwise)

Preceding gene: 83594568

Following gene: 83594560

Centisome position: 85.61

GC content: 66.67

Gene sequence:

>684_bases
ATGACAGACAAGCCCAGGTTCGCGGTGCTGCTTTCGGGCTGCGGCGTGTTTGATGGCGCGGAAATCCACGAAAGCGTTCT
GACCTTGCTGGCGATCGACCGCCAGGGCGGGGTGGCGCGCTGTTTCGCGCCCGATCGGCCGCAGTATCACGTGATCGACC
ACCGCAGCGGCCAGCCCACCGGCGAAACCCGCAATGTGCTGTGCGAATCGGCGCGCATCGCCCGCGGCGCCATCGACGAT
CTGGCCGATTTCGACCCGGCGGCGTTTGATGCCCTGATTTTGCCCGGCGGCTTTGGAGCGGCGAAAAATCTGTGTAGCTT
CGCCATCGACGGCGCCGACTGCGCGGTCGATCCCACCGTCGAGCGCGCCTTGCGGGCGGCGCGGGCGGCCGGATTGGCGA
TCGGCGCCCTGTGCATCGCCCCGGTCGTTCTGGCCCGGGTGTTTGGCGAAGGCGTCCTGACTATCGGCTCGGATGCGGCG
ACGGCGGAGGCGATCACGGCCTTGGGGGCGCACCACCAAAAGGCGACGCACGCCGAGGTGGTTGTTGACCGTGCCTTACG
GCTTGTCTCTTCGCCGTGCTACATGCTTGATGCCAGCATCAGCCAAATCGCCGAGGGCGCGGAGAACACGGTCAAGGCCT
TGATCGCGCTGATCGGCACCAACGGGCAGGCGAACCAAGGCTGA

Upstream 100 bases:

>100_bases
GCTGGGGAACTGCGGGTTGGCATGGCGATGTCCGGGTCCTAACCTGGAGTGAGAACGGAGCGAGAGACCCGTCCCACCCG
GAATATGGAGAGGAACGACT

Downstream 100 bases:

>100_bases
ACCCTATCCTTTTGGCGCAACCAAAAGGCGTGAATTATTTGTTTCTTTGTGGATCGGAGGTTGACGATTCACCGCCGCCG
TCGGCTATCGTATCGACGTC

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTDKPRFAVLLSGCGVFDGAEIHESVLTLLAIDRQGGVARCFAPDRPQYHVIDHRSGQPTGETRNVLCESARIARGAIDD
LADFDPAAFDALILPGGFGAAKNLCSFAIDGADCAVDPTVERALRAARAAGLAIGALCIAPVVLARVFGEGVLTIGSDAA
TAEAITALGAHHQKATHAEVVVDRALRLVSSPCYMLDASISQIAEGAENTVKALIALIGTNGQANQG

Sequences:

>Translated_227_residues
MTDKPRFAVLLSGCGVFDGAEIHESVLTLLAIDRQGGVARCFAPDRPQYHVIDHRSGQPTGETRNVLCESARIARGAIDD
LADFDPAAFDALILPGGFGAAKNLCSFAIDGADCAVDPTVERALRAARAAGLAIGALCIAPVVLARVFGEGVLTIGSDAA
TAEAITALGAHHQKATHAEVVVDRALRLVSSPCYMLDASISQIAEGAENTVKALIALIGTNGQANQG
>Mature_226_residues
TDKPRFAVLLSGCGVFDGAEIHESVLTLLAIDRQGGVARCFAPDRPQYHVIDHRSGQPTGETRNVLCESARIARGAIDDL
ADFDPAAFDALILPGGFGAAKNLCSFAIDGADCAVDPTVERALRAARAAGLAIGALCIAPVVLARVFGEGVLTIGSDAAT
AEAITALGAHHQKATHAEVVVDRALRLVSSPCYMLDASISQIAEGAENTVKALIALIGTNGQANQG

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=224, Percent_Identity=48.6607142857143, Blast_Score=200, Evalue=7e-52,
Organism=Homo sapiens, GI296531408, Length=224, Percent_Identity=41.9642857142857, Blast_Score=155, Evalue=4e-38,
Organism=Escherichia coli, GI87082228, Length=213, Percent_Identity=48.8262910798122, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23414; Mature: 23283

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKPRFAVLLSGCGVFDGAEIHESVLTLLAIDRQGGVARCFAPDRPQYHVIDHRSGQPT
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCC
GETRNVLCESARIARGAIDDLADFDPAAFDALILPGGFGAAKNLCSFAIDGADCAVDPTV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCHHHHHHHHHHCCCCCCCCCHHH
ERALRAARAAGLAIGALCIAPVVLARVFGEGVLTIGSDAATAEAITALGAHHQKATHAEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
VVDRALRLVSSPCYMLDASISQIAEGAENTVKALIALIGTNGQANQG
HHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TDKPRFAVLLSGCGVFDGAEIHESVLTLLAIDRQGGVARCFAPDRPQYHVIDHRSGQPT
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCC
GETRNVLCESARIARGAIDDLADFDPAAFDALILPGGFGAAKNLCSFAIDGADCAVDPTV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCHHHHHHHHHHCCCCCCCCCHHH
ERALRAARAAGLAIGALCIAPVVLARVFGEGVLTIGSDAATAEAITALGAHHQKATHAEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
VVDRALRLVSSPCYMLDASISQIAEGAENTVKALIALIGTNGQANQG
HHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]