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The map label for this gene is fecD [C]

Identifier: 83594552

GI number: 83594552

Start: 3716735

End: 3717811

Strand: Direct

Name: fecD [C]

Synonym: Rru_A3222

Alternate gene names: 83594552

Gene position: 3716735-3717811 (Clockwise)

Preceding gene: 83594549

Following gene: 83594553

Centisome position: 85.39

GC content: 69.45

Gene sequence:

>1077_bases
ATGCCCAAAGGTCTTCACCCGCCGCTGTCCCGTCCCTTTCGTCTTGGCCGGGCGATCCCGCGAACGGCCCTGGGCGGGGC
CCTCTGTCTGGTCGTCACCCTCACCCTGATCTCCTTCGCCATCGGCCCCTATGGCGTCGCCCCGGGCAAGGTTCTGGCGA
TTCTGGCCAGCCGGGCGCTTCCCGGCCTTGCCCAGGCCCTGAGCCTGTCTTGGACGCCCGAGGACGAGGTGGTGGTGATG
GCCATCCGCCTGCCACGCATCCTGGGGGCGCTTCTGGTCGGCGCCGCCCTGGCCACCTCGGGGGCAACCTTTCAGGGATT
ATTCCGCAATCCGCTGGTCTCGCCCGATCTGCTGGGCGCGGCGGCGGGGGCTGGGTGCGCCGCCGCCGCCGGCCTTTTGC
TGGGGCTTGGCGGCCCGGCCATCCAGGGTCTGGCCTTCCTTGGCGGACTGGCCGCCGTCGGACTGACCTGCTTGATCGCC
AAAGGCCGTGGCGGTGCCGGCGACGGCCCCTTGATGATGGTGTTGACCGGGCTGATCGTCGGCACGGTGTTTTCGGCATT
CATCGGCCTGATTAAAACCCTGGCCGATCCCGATAACACCCTGCCGGCCATCACCTTCTGGCTGATGGGCAGCCTGTCGG
CGATCACCTTGGACGATATCGCGCTCGCCGCTCCGCCGATCGGCTGCGGGGTGGGGCTGGCCTGCCTGCTGCGCTGGCGG
TTGAACGCCCTGGCCTTCGGCGATGACGAAGCCCGGGCGCTTGGCATCGATGTCGGCCGCGTCCGACTGGCGGCCATCGT
CGCCGCCACCTTGATGACCGCCGCGGCCGTCGCCATCGCCGGCATCATCGGTTTGGTCGGGCTGGTGGTGCCCCATATGA
CGCGCATGCTGCTTGGCCCCAATCACGCCGTGCTGCTGCCAGCCTGCGCGCTGTTGGGGGGAGCCTTCCTGCTTGGTGTC
GATGATCTGGCGCGCAGCCTGGGGCCGACCGAAATCCCGCTTGGCATCCTGACCGCCCTGATCGGCGCGCCCTTGTTCCT
GGCGCTGCTTCCCGGGGCGCGGCGGGGATGGCGATGA

Upstream 100 bases:

>100_bases
CCTCCAGAGCGGCGAGTGGAAAAGGCAAGAGGGGGTTTCCCCGTGATCGCCGCTCTAATCCGCCGAATCCACTGATCGAG
GTCCGCCGCCGGGAGTTTTG

Downstream 100 bases:

>100_bases
GCCCACCGCCTTTGCTCGCCGTTACGGATCTGGCCTGCGGCTATCGCGGTCGCCGGGTGCTGGGGGGGATCGGGTTCACC
CTGGCGGCGGGGGACCTGCT

Product: transport system permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MPKGLHPPLSRPFRLGRAIPRTALGGALCLVVTLTLISFAIGPYGVAPGKVLAILASRALPGLAQALSLSWTPEDEVVVM
AIRLPRILGALLVGAALATSGATFQGLFRNPLVSPDLLGAAAGAGCAAAAGLLLGLGGPAIQGLAFLGGLAAVGLTCLIA
KGRGGAGDGPLMMVLTGLIVGTVFSAFIGLIKTLADPDNTLPAITFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWR
LNALAFGDDEARALGIDVGRVRLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGPNHAVLLPACALLGGAFLLGV
DDLARSLGPTEIPLGILTALIGAPLFLALLPGARRGWR

Sequences:

>Translated_358_residues
MPKGLHPPLSRPFRLGRAIPRTALGGALCLVVTLTLISFAIGPYGVAPGKVLAILASRALPGLAQALSLSWTPEDEVVVM
AIRLPRILGALLVGAALATSGATFQGLFRNPLVSPDLLGAAAGAGCAAAAGLLLGLGGPAIQGLAFLGGLAAVGLTCLIA
KGRGGAGDGPLMMVLTGLIVGTVFSAFIGLIKTLADPDNTLPAITFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWR
LNALAFGDDEARALGIDVGRVRLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGPNHAVLLPACALLGGAFLLGV
DDLARSLGPTEIPLGILTALIGAPLFLALLPGARRGWR
>Mature_357_residues
PKGLHPPLSRPFRLGRAIPRTALGGALCLVVTLTLISFAIGPYGVAPGKVLAILASRALPGLAQALSLSWTPEDEVVVMA
IRLPRILGALLVGAALATSGATFQGLFRNPLVSPDLLGAAAGAGCAAAAGLLLGLGGPAIQGLAFLGGLAAVGLTCLIAK
GRGGAGDGPLMMVLTGLIVGTVFSAFIGLIKTLADPDNTLPAITFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWRL
NALAFGDDEARALGIDVGRVRLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGPNHAVLLPACALLGGAFLLGVD
DLARSLGPTEIPLGILTALIGAPLFLALLPGARRGWR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=295, Percent_Identity=38.9830508474576, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1788004, Length=286, Percent_Identity=37.0629370629371, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1786805, Length=307, Percent_Identity=35.1791530944625, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1790741, Length=287, Percent_Identity=35.191637630662, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786347, Length=285, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786804, Length=329, Percent_Identity=33.7386018237082, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35858; Mature: 35726

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKGLHPPLSRPFRLGRAIPRTALGGALCLVVTLTLISFAIGPYGVAPGKVLAILASRAL
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PGLAQALSLSWTPEDEVVVMAIRLPRILGALLVGAALATSGATFQGLFRNPLVSPDLLGA
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHH
AAGAGCAAAAGLLLGLGGPAIQGLAFLGGLAAVGLTCLIAKGRGGAGDGPLMMVLTGLIV
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHH
GTVFSAFIGLIKTLADPDNTLPAITFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHHHH
LNALAFGDDEARALGIDVGRVRLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGP
HHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NHAVLLPACALLGGAFLLGVDDLARSLGPTEIPLGILTALIGAPLFLALLPGARRGWR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PKGLHPPLSRPFRLGRAIPRTALGGALCLVVTLTLISFAIGPYGVAPGKVLAILASRAL
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PGLAQALSLSWTPEDEVVVMAIRLPRILGALLVGAALATSGATFQGLFRNPLVSPDLLGA
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHH
AAGAGCAAAAGLLLGLGGPAIQGLAFLGGLAAVGLTCLIAKGRGGAGDGPLMMVLTGLIV
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHH
GTVFSAFIGLIKTLADPDNTLPAITFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHHHH
LNALAFGDDEARALGIDVGRVRLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGP
HHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NHAVLLPACALLGGAFLLGVDDLARSLGPTEIPLGILTALIGAPLFLALLPGARRGWR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]