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The map label for this gene is btuB [H]

Identifier: 83594550

GI number: 83594550

Start: 3713858

End: 3715822

Strand: Reverse

Name: btuB [H]

Synonym: Rru_A3220

Alternate gene names: 83594550

Gene position: 3715822-3713858 (Counterclockwise)

Preceding gene: 83594551

Following gene: 83594544

Centisome position: 85.37

GC content: 62.7

Gene sequence:

>1965_bases
ATGAAGGGTATTGCCATGTCCCTGTTGGCGGTCGGAACCGTCGTGGCCGGGGGGGCTTCGCCAAGTGAGGCATCGGTTTT
TGAATTGGGCGAGATCCTGGTCTCCGCCCCCGGGGAGCGCGGCGAGGCGGCCAGCGATACGGTGCGGGGCGAGGAGATGC
GCGCCCACGACGCCCAGACGGTCAGTCAGGCGATCGATCGCGTTCCCGGGGTGACGCTGTCGCGCGGCGGCGCCCGTAAC
GAGGAAATGGTCAGCGTGCGCGGTTTCACGCTGCGTCAGGTTCCGGTTCTGATCGATGGCATTCCGGTTTACGTGCCCTA
TGACGGCAATGTCGATCTGGGGCGCTTCACCACCTTCGATTTGTCGAAGATCGAGGTCGCCAAGGATGGCGGCTCGGTGC
TGACCGGCCCCAATGCCCTGGGCGGGGTGATCAATCTGGTGACCCGCAAGCCGACCAAGGCCCTGGAAGGCGAGCTTGAA
AGCGGGGTGCGCTTTGGCGACGGCGGCTATAACGGCGCCTATTCGGCCTTCTCGGCGGGCAGTCGCCAGGATCTGGGCTG
GGTCCAGGGCAGCGGCAGTTGGTCGAAGCTGGAAGGATTCAGCTTGGCCGATGGGGTGAGCGGGCGCGACGAGAACGGCG
GGTATCGCGGCAATTCCGCCGCCGAGGATGTCAAGCTCAACCTCAAGGCGGCGATCACCCCGCGCGACGATGACGAATAC
GCGCTCAACCTCATCTACCAGCACGGCGAAAAGGGCAATCCGCCCTATATGGGCGATGACCGCAGCGTCACCTCGCGCTA
TTGGCAATGGCCGAAGTGGGATAAGCGCAGCCTTTATTGGCTGTCGCGGACGGGGCTTTCCGAAAGCTGGTCGCTCAAGA
CCCGGGCCTATTATGACTCGTTCGTCAACCGGCTGAAGGCCTTCGACGATAAGGATTACGACACCCAGGCCCGGGCATCG
TCGTTCACCAGCTATTACGATGACTACTCGGTCGGCGGGTCGAGCGAGGTTGGCGGCGATCTGGCCGAATGGAGCACGCT
GAAGCTGGCGGCCCATTTCAAGCAGGACGTTCACCGCGAGCACAACGCCGGCGAGCCGACCCGCACCGATATCGATAACA
CTTGGTCGTTTGGCGCCGAGCACACCGCCCATGTCACCCGGGATCTCGATCTCATCACCGGCCTCAGCTACGACTGGCGC
GATACCCAGAAGGCCGAGGATTACCAAAACAAGGCCATCACGGATTTCCCGCTGACCAGCAGCGACGCCGTCAACTGGCA
GATCAAGGGTGTCTATCGCTATAGCGACACCGGCGCCCTGCACGCCTCGATGGCCTATAAAAGCCGCTTCCCGACGCTGA
AGGACCGCTATTCCTATCGGATGGGCCGAGGCTTGCCCAATGCGTCGCTGGAGGCCGAGCGCGCCGCCACCTATGAACTG
GGGGTCGAGCAGACGCTGTTTGGCAACACGCGGATCGATGCCTCGGTCTTTCACAGCGCGATTTCCGACGCCATCGAATC
GGTCGCCCTGACCCGCAATGTCAGCCAGATGCAAAACGTTGGCGACGCCATTCATCAGGGTCTGGAACTGGGCATCCAGA
CCACCGTGCTGCCGCGCACCGAGCTTGGCGTCTCGTATACGCTGCTCAATGCCCAGAACGAGAAATCGGCGATCCACGTC
ACCGACGCGCCGCGTCACAAGGGCGTGATCTATGGCGCCTATGCGCTGACCGACGCCCTGTCGGTGCGACCGAGCGTGAC
CCTGGCCTCGGAACGCTATTCCGATACCGCTGGAACCAAGGTCGATGGGTACGTCATCTCCGACCTCGCGGTACGCTACG
ACGTCACTGAGGCGATCAGCCTGGAAGCCGGGGTCAACAACATCCTTGATACCCGCTACGAGCTCAGCGAGGGCTACCCG
GAAGAGGGGCGCAATTACTTCCTCAAGGGCAAAGTGACGTTCTGA

Upstream 100 bases:

>100_bases
TTCCGTCTCCCCCCTTTTCCAATCTCCCCCCCCAGACTCGCGGCCCCCGACGGGGCCGTTTATCCAGCGCTATATACGTT
CATGCCTATGGAGGGTAACC

Downstream 100 bases:

>100_bases
CGCTTGCCCAAGGCCGGTGGGGGCTTCCCCTACCGGTCTTCGCCGGCCAGGGCGGCGGCCTGGGGCAGGCTGAGCGTGAC
CTGATAGAAGCGGGCGAAGA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]

Number of amino acids: Translated: 654; Mature: 654

Protein sequence:

>654_residues
MKGIAMSLLAVGTVVAGGASPSEASVFELGEILVSAPGERGEAASDTVRGEEMRAHDAQTVSQAIDRVPGVTLSRGGARN
EEMVSVRGFTLRQVPVLIDGIPVYVPYDGNVDLGRFTTFDLSKIEVAKDGGSVLTGPNALGGVINLVTRKPTKALEGELE
SGVRFGDGGYNGAYSAFSAGSRQDLGWVQGSGSWSKLEGFSLADGVSGRDENGGYRGNSAAEDVKLNLKAAITPRDDDEY
ALNLIYQHGEKGNPPYMGDDRSVTSRYWQWPKWDKRSLYWLSRTGLSESWSLKTRAYYDSFVNRLKAFDDKDYDTQARAS
SFTSYYDDYSVGGSSEVGGDLAEWSTLKLAAHFKQDVHREHNAGEPTRTDIDNTWSFGAEHTAHVTRDLDLITGLSYDWR
DTQKAEDYQNKAITDFPLTSSDAVNWQIKGVYRYSDTGALHASMAYKSRFPTLKDRYSYRMGRGLPNASLEAERAATYEL
GVEQTLFGNTRIDASVFHSAISDAIESVALTRNVSQMQNVGDAIHQGLELGIQTTVLPRTELGVSYTLLNAQNEKSAIHV
TDAPRHKGVIYGAYALTDALSVRPSVTLASERYSDTAGTKVDGYVISDLAVRYDVTEAISLEAGVNNILDTRYELSEGYP
EEGRNYFLKGKVTF

Sequences:

>Translated_654_residues
MKGIAMSLLAVGTVVAGGASPSEASVFELGEILVSAPGERGEAASDTVRGEEMRAHDAQTVSQAIDRVPGVTLSRGGARN
EEMVSVRGFTLRQVPVLIDGIPVYVPYDGNVDLGRFTTFDLSKIEVAKDGGSVLTGPNALGGVINLVTRKPTKALEGELE
SGVRFGDGGYNGAYSAFSAGSRQDLGWVQGSGSWSKLEGFSLADGVSGRDENGGYRGNSAAEDVKLNLKAAITPRDDDEY
ALNLIYQHGEKGNPPYMGDDRSVTSRYWQWPKWDKRSLYWLSRTGLSESWSLKTRAYYDSFVNRLKAFDDKDYDTQARAS
SFTSYYDDYSVGGSSEVGGDLAEWSTLKLAAHFKQDVHREHNAGEPTRTDIDNTWSFGAEHTAHVTRDLDLITGLSYDWR
DTQKAEDYQNKAITDFPLTSSDAVNWQIKGVYRYSDTGALHASMAYKSRFPTLKDRYSYRMGRGLPNASLEAERAATYEL
GVEQTLFGNTRIDASVFHSAISDAIESVALTRNVSQMQNVGDAIHQGLELGIQTTVLPRTELGVSYTLLNAQNEKSAIHV
TDAPRHKGVIYGAYALTDALSVRPSVTLASERYSDTAGTKVDGYVISDLAVRYDVTEAISLEAGVNNILDTRYELSEGYP
EEGRNYFLKGKVTF
>Mature_654_residues
MKGIAMSLLAVGTVVAGGASPSEASVFELGEILVSAPGERGEAASDTVRGEEMRAHDAQTVSQAIDRVPGVTLSRGGARN
EEMVSVRGFTLRQVPVLIDGIPVYVPYDGNVDLGRFTTFDLSKIEVAKDGGSVLTGPNALGGVINLVTRKPTKALEGELE
SGVRFGDGGYNGAYSAFSAGSRQDLGWVQGSGSWSKLEGFSLADGVSGRDENGGYRGNSAAEDVKLNLKAAITPRDDDEY
ALNLIYQHGEKGNPPYMGDDRSVTSRYWQWPKWDKRSLYWLSRTGLSESWSLKTRAYYDSFVNRLKAFDDKDYDTQARAS
SFTSYYDDYSVGGSSEVGGDLAEWSTLKLAAHFKQDVHREHNAGEPTRTDIDNTWSFGAEHTAHVTRDLDLITGLSYDWR
DTQKAEDYQNKAITDFPLTSSDAVNWQIKGVYRYSDTGALHASMAYKSRFPTLKDRYSYRMGRGLPNASLEAERAATYEL
GVEQTLFGNTRIDASVFHSAISDAIESVALTRNVSQMQNVGDAIHQGLELGIQTTVLPRTELGVSYTLLNAQNEKSAIHV
TDAPRHKGVIYGAYALTDALSVRPSVTLASERYSDTAGTKVDGYVISDLAVRYDVTEAISLEAGVNNILDTRYELSEGYP
EEGRNYFLKGKVTF

Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 71454; Mature: 71454

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIAMSLLAVGTVVAGGASPSEASVFELGEILVSAPGERGEAASDTVRGEEMRAHDAQT
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
VSQAIDRVPGVTLSRGGARNEEMVSVRGFTLRQVPVLIDGIPVYVPYDGNVDLGRFTTFD
HHHHHHHCCCCEEECCCCCCCCEEEECCCEEEECCEEECCEEEEEECCCCCCCCCEEEEC
LSKIEVAKDGGSVLTGPNALGGVINLVTRKPTKALEGELESGVRFGDGGYNGAYSAFSAG
CCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCHHHHCCC
SRQDLGWVQGSGSWSKLEGFSLADGVSGRDENGGYRGNSAAEDVKLNLKAAITPRDDDEY
CCCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHH
ALNLIYQHGEKGNPPYMGDDRSVTSRYWQWPKWDKRSLYWLSRTGLSESWSLKTRAYYDS
HHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
FVNRLKAFDDKDYDTQARASSFTSYYDDYSVGGSSEVGGDLAEWSTLKLAAHFKQDVHRE
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HNAGEPTRTDIDNTWSFGAEHTAHVTRDLDLITGLSYDWRDTQKAEDYQNKAITDFPLTS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCCCC
SDAVNWQIKGVYRYSDTGALHASMAYKSRFPTLKDRYSYRMGRGLPNASLEAERAATYEL
CCCCEEEEEEEEEECCCCCEEHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHC
GVEQTLFGNTRIDASVFHSAISDAIESVALTRNVSQMQNVGDAIHQGLELGIQTTVLPRT
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH
ELGVSYTLLNAQNEKSAIHVTDAPRHKGVIYGAYALTDALSVRPSVTLASERYSDTAGTK
HCCEEEEEEECCCCCCEEEEECCCCCCCEEEEHHHHHHHHHCCCCEEECHHCCCCCCCCE
VDGYVISDLAVRYDVTEAISLEAGVNNILDTRYELSEGYPEEGRNYFLKGKVTF
ECCEEEECEEEEECHHHHEEHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKGIAMSLLAVGTVVAGGASPSEASVFELGEILVSAPGERGEAASDTVRGEEMRAHDAQT
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
VSQAIDRVPGVTLSRGGARNEEMVSVRGFTLRQVPVLIDGIPVYVPYDGNVDLGRFTTFD
HHHHHHHCCCCEEECCCCCCCCEEEECCCEEEECCEEECCEEEEEECCCCCCCCCEEEEC
LSKIEVAKDGGSVLTGPNALGGVINLVTRKPTKALEGELESGVRFGDGGYNGAYSAFSAG
CCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCHHHHCCC
SRQDLGWVQGSGSWSKLEGFSLADGVSGRDENGGYRGNSAAEDVKLNLKAAITPRDDDEY
CCCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHH
ALNLIYQHGEKGNPPYMGDDRSVTSRYWQWPKWDKRSLYWLSRTGLSESWSLKTRAYYDS
HHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
FVNRLKAFDDKDYDTQARASSFTSYYDDYSVGGSSEVGGDLAEWSTLKLAAHFKQDVHRE
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HNAGEPTRTDIDNTWSFGAEHTAHVTRDLDLITGLSYDWRDTQKAEDYQNKAITDFPLTS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCCCC
SDAVNWQIKGVYRYSDTGALHASMAYKSRFPTLKDRYSYRMGRGLPNASLEAERAATYEL
CCCCEEEEEEEEEECCCCCEEHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHC
GVEQTLFGNTRIDASVFHSAISDAIESVALTRNVSQMQNVGDAIHQGLELGIQTTVLPRT
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH
ELGVSYTLLNAQNEKSAIHVTDAPRHKGVIYGAYALTDALSVRPSVTLASERYSDTAGTK
HCCEEEEEEECCCCCCEEEEECCCCCCCEEEEHHHHHHHHHCCCCEEECHHCCCCCCCCE
VDGYVISDLAVRYDVTEAISLEAGVNNILDTRYELSEGYPEEGRNYFLKGKVTF
ECCEEEECEEEEECHHHHEEHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]