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The map label for this gene is shp [H]

Identifier: 83594514

GI number: 83594514

Start: 3674730

End: 3675626

Strand: Reverse

Name: shp [H]

Synonym: Rru_A3184

Alternate gene names: 83594514

Gene position: 3675626-3674730 (Counterclockwise)

Preceding gene: 83594515

Following gene: 83594513

Centisome position: 84.44

GC content: 70.9

Gene sequence:

>897_bases
ATGAGCGGGCGCGGGCTGTGGCGGCTGTGGCATGCCGCCCTTCTGGGATCGGGGGTGGTGGCCTATCTCACCGCCGATGA
GGATACTTACCGGATGCATCAGGCGGCCGGCTATCTGTTCGTCGTGCTGATCCTTGGCCGGCTGATCGCCGCCCTGGCCG
GCTCGGGCGCCTTCGCTTTGCGCCGCCCCGCTCGCCTGTCTGCCCAGGGCCGCCCCGGCGTCAGGGCGAGCCTGCGGCCG
TTGCTGCCCTGGATGACTGCCGGGCTGCTGCTGGTTCTGGGCCTTGCCGGCCTAAGCGGCGTCGGCGCCGATTGGTCCAA
GGCGTTCAAGGGCGTTCACGAAATCCTGGGCGAGGTCACGCCCTGGGTGGTTTTCGCCCATGTCGTGCTGGTGGTGGCGG
TCTTCGCCGGTCCGCTGGCCGGTCGCAAGGCGCGGCGCCGGCCGATGGGCGGGGGTAGCCGGGTGCTGCCCGGGCTGTGT
CTGGCCGCCGCGCTGGCGACGGGTTTGGCATCGGGTCTGGCGGCAAGCCGGCCCGCCTGGGCCGGCCCGCCCCAAGACGC
GGTTCTGGCCGTGCTTGCCGAGCGGGCGCGGGCGGCGGAGGGGGCCTTTGCCGGCTTTGATAGCCGGCGCGGCGAAGCCC
TCTATCGCGCGCTTTCGACCAATGACCCCGAGCTGACGTCTTGCGCCGCCTGCCATGGCGTCGATCCCCGGGCGGCGGGC
CGTCATGTCAAAAGCGGCCGGGCCATCGAGCCGGTGGCGGTTTCGGCCAATCCCGAGCGCTTCGGCGATATCGCCAAGGT
CGACAAGCGCTTCACCCGCGACTGCAAGGCCGTTCTCGGCCGCGCTTGCACCGCCCTGGAACAGGGCGATTACGCCCGCT
TTTTGATCGAGAGATAG

Upstream 100 bases:

>100_bases
ATCATCACCGCGACCACGATCACGATGACCACGATGGCAGTGACGATGACGACGACGACTGGGCCTGGGGGGGCGACGAC
AGCGTCGTCGGGGGTCGGCG

Downstream 100 bases:

>100_bases
GGGAGATCCTCATGACCCACCGGCTTTTTCTTACCCTGGCGGCGATCGGCCTGGGCTTGGGATGGACCGCGACGGCGCGA
GCGGGGGATGATTTCATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Oxygen-binding heme protein; Sphaeroides heme protein [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSGRGLWRLWHAALLGSGVVAYLTADEDTYRMHQAAGYLFVVLILGRLIAALAGSGAFALRRPARLSAQGRPGVRASLRP
LLPWMTAGLLLVLGLAGLSGVGADWSKAFKGVHEILGEVTPWVVFAHVVLVVAVFAGPLAGRKARRRPMGGGSRVLPGLC
LAAALATGLASGLAASRPAWAGPPQDAVLAVLAERARAAEGAFAGFDSRRGEALYRALSTNDPELTSCAACHGVDPRAAG
RHVKSGRAIEPVAVSANPERFGDIAKVDKRFTRDCKAVLGRACTALEQGDYARFLIER

Sequences:

>Translated_298_residues
MSGRGLWRLWHAALLGSGVVAYLTADEDTYRMHQAAGYLFVVLILGRLIAALAGSGAFALRRPARLSAQGRPGVRASLRP
LLPWMTAGLLLVLGLAGLSGVGADWSKAFKGVHEILGEVTPWVVFAHVVLVVAVFAGPLAGRKARRRPMGGGSRVLPGLC
LAAALATGLASGLAASRPAWAGPPQDAVLAVLAERARAAEGAFAGFDSRRGEALYRALSTNDPELTSCAACHGVDPRAAG
RHVKSGRAIEPVAVSANPERFGDIAKVDKRFTRDCKAVLGRACTALEQGDYARFLIER
>Mature_297_residues
SGRGLWRLWHAALLGSGVVAYLTADEDTYRMHQAAGYLFVVLILGRLIAALAGSGAFALRRPARLSAQGRPGVRASLRPL
LPWMTAGLLLVLGLAGLSGVGADWSKAFKGVHEILGEVTPWVVFAHVVLVVAVFAGPLAGRKARRRPMGGGSRVLPGLCL
AAALATGLASGLAASRPAWAGPPQDAVLAVLAERARAAEGAFAGFDSRRGEALYRALSTNDPELTSCAACHGVDPRAAGR
HVKSGRAIEPVAVSANPERFGDIAKVDKRFTRDCKAVLGRACTALEQGDYARFLIER

Specific function: High-spin cytochrome. Transiently bind oxygen during autoxidation, which occurs with a half-life of 3 min with a 4-fold excess of O(2). Also binds carbon monoxide, azide and cyanide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR015170 [H]

Pfam domain/function: PF09086 DUF1924 [H]

EC number: NA

Molecular weight: Translated: 31262; Mature: 31130

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRGLWRLWHAALLGSGVVAYLTADEDTYRMHQAAGYLFVVLILGRLIAALAGSGAFAL
CCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RRPARLSAQGRPGVRASLRPLLPWMTAGLLLVLGLAGLSGVGADWSKAFKGVHEILGEVT
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
PWVVFAHVVLVVAVFAGPLAGRKARRRPMGGGSRVLPGLCLAAALATGLASGLAASRPAW
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGPPQDAVLAVLAERARAAEGAFAGFDSRRGEALYRALSTNDPELTSCAACHGVDPRAAG
CCCCHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHC
RHVKSGRAIEPVAVSANPERFGDIAKVDKRFTRDCKAVLGRACTALEQGDYARFLIER
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
SGRGLWRLWHAALLGSGVVAYLTADEDTYRMHQAAGYLFVVLILGRLIAALAGSGAFAL
CCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RRPARLSAQGRPGVRASLRPLLPWMTAGLLLVLGLAGLSGVGADWSKAFKGVHEILGEVT
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
PWVVFAHVVLVVAVFAGPLAGRKARRRPMGGGSRVLPGLCLAAALATGLASGLAASRPAW
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGPPQDAVLAVLAERARAAEGAFAGFDSRRGEALYRALSTNDPELTSCAACHGVDPRAAG
CCCCHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHC
RHVKSGRAIEPVAVSANPERFGDIAKVDKRFTRDCKAVLGRACTALEQGDYARFLIER
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9558336; 10821858 [H]