Click here to switch to the map view.

The map label for this gene is 83594486

Identifier: 83594486

GI number: 83594486

Start: 3646322

End: 3648049

Strand: Reverse

Name: 83594486

Synonym: Rru_A3156

Alternate gene names: NA

Gene position: 3648049-3646322 (Counterclockwise)

Preceding gene: 83594489

Following gene: 83594485

Centisome position: 83.81

GC content: 72.8

Gene sequence:

>1728_bases
ATGGTATCGCCAACACTGAAGCCTGCGATGGATGCCGACTGGACCCTGCTGAGCGTGCTTGGCAAGCCCGTTGTCCATTC
CCACGACCGGCTTTCCGCGCTCCTTAGGGTTCATATCGGCCAGGAGGCTCAGGCGCTGCTCGCCGAGCCGGTGTTCGCGG
AGGCCCCCGCCGCTGATGGTGGCGCCGACCTTCGCCGGCCGATCGGCTGGAGATCGCCGCGCGGTGGCGCGCTGACGCCG
CTGTCGGCGGCGGCCAATCCCGGCCTGTTGCGCGACCGCTTCGCCCGGCTCGAGCGCGAGATCACCGCGCTTTGCGCCCG
TCTGTCGACCCAGGGGGAAGCCGGGCAATCGGCGGCGGAGTCCCTGCGCCTTGCCCTGATTACCCCCGAAGGCGGCGCGT
GGCTGTATGCCGATCACGACCAGCCGGTTCTTGTGTGCTGGGGCCTGGGGCGGCCCGGTCAGGCGATCGCCGCCGGTGCG
GTGGGCGCGCTTTCCGGCGCGGCGCGGGCCGCCGCCGCGAGCGCTGTTTCGGGATCCGCTGCCCCCGTCGCCCCATCGCC
GGTGGGGGGAGCGGCAAGCCCGCCCCCCGCCGGATCGCCGCCGCCGGCTGAGGGGGCTGGGTCTTCCCCCGTGGCGCCCG
CGCCCGGTCGCCGAGCCTGGATCGCGCCGGCCCTGCTCGCCTTGGCCCTGTTGCTTTTGGCGGGCTGGCTGGCTTGGCGG
GCGCTGACGCCGCTGGCCCCGGTGATCGTCGAAGCCCCGGCGGAGGCGCCGGCCGATCTTAGCCGTCTTGACGATCTGGG
GCGGACCCTGGCCCAGCTTGATCAGGCCCTGGGCGAGGCCCGCCTCGCCGAGGACGCCTTCCAGAAGGCCTGCGTGGTTC
CCCCCGAACCAACGCCCGAACCAACCCCGGCGCCGCCGGCCGCCGCGCCCGCCCCCCAACCCGATCCTTTGCCTGATCGC
GCCGAGGGTTCGCCGCCGCCACCGGCCGAGGCGGCCCCCCCCGAGGTTAAACCCGAAGCGCCGCCGCCGGCTGCGCCAGC
CAAGCCCAAACCGCCGATAACGGCGGCCAAGCCGCCGGCCAAGGTCGCGCCCCCCGCCCCGGCCCCAGCCGAACCGCCGG
CCCAGCCCGCCTCGCGGGCGGCTTGCGAGCCGTCGTGGTCGCCGGGCCGCGAGCCGCGGATGATCTTCGTCGTCGATGGC
TCGGGCAGCATGAGCGAGGGCATCGCCGGGGCGCCTTCGCGCATTTCGGCGGCCAAGCGCTCGATCCGCGATACGGTGAA
CGCCCTGCACAAGGATATCCGGGTGGGCATGGTATCGTTCAGCGATTGCATGGCGACCCAGAACAGCAAGTATTACTCGG
CCGCCGAGCGCCCGGCCTTTCTCGCCGGGGTCGATGCCATCACCCCCGAACGCGCCACCTCGCTCGCCGCCTCGATCCGT
CGCGGTGGCGCCCTGGCCACCCGGCGCTCGGAAACCGTGATGATGGTGGTCAGCGATGGCGAGGATACCTGTGGCGGCGA
TCCTTGCGCCGCCGCCCGCGCCGTCAAGGCCGAGAAATCCAATGTGATCATCCATGTCATCGATTTGAGCGGCGGCGGCA
ACAGTGGGGTCGCCCGCTGCATCGCTTCGGCCGGCGGCGGTCGGGTCTTCACCCCCGGCTCGGCCGCCCAGGTGACCAGC
AGTCTGCGGACGGCGACGGGCCAACCCGACGCCAGCGGATGTCAGTAA

Upstream 100 bases:

>100_bases
AAAAAATATCCCATTGATAGCAAATGATCCTTGAGGTGACGGGAGCGAATGGGCATACCCTGATCGGCCGGGTAACAATT
GGGGGTCCGTTTGGCGCGCC

Downstream 100 bases:

>100_bases
CGGCGACGCCGGGCGGGGGGACCTGCGGCCCGGCGTCCGACCATGGCCCAAAGCACGGATGAATGGCATGAAGCAAGGCA
GGATCATTCTCGAGGCCAAA

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MVSPTLKPAMDADWTLLSVLGKPVVHSHDRLSALLRVHIGQEAQALLAEPVFAEAPAADGGADLRRPIGWRSPRGGALTP
LSAAANPGLLRDRFARLEREITALCARLSTQGEAGQSAAESLRLALITPEGGAWLYADHDQPVLVCWGLGRPGQAIAAGA
VGALSGAARAAAASAVSGSAAPVAPSPVGGAASPPPAGSPPPAEGAGSSPVAPAPGRRAWIAPALLALALLLLAGWLAWR
ALTPLAPVIVEAPAEAPADLSRLDDLGRTLAQLDQALGEARLAEDAFQKACVVPPEPTPEPTPAPPAAAPAPQPDPLPDR
AEGSPPPPAEAAPPEVKPEAPPPAAPAKPKPPITAAKPPAKVAPPAPAPAEPPAQPASRAACEPSWSPGREPRMIFVVDG
SGSMSEGIAGAPSRISAAKRSIRDTVNALHKDIRVGMVSFSDCMATQNSKYYSAAERPAFLAGVDAITPERATSLAASIR
RGGALATRRSETVMMVVSDGEDTCGGDPCAAARAVKAEKSNVIIHVIDLSGGGNSGVARCIASAGGGRVFTPGSAAQVTS
SLRTATGQPDASGCQ

Sequences:

>Translated_575_residues
MVSPTLKPAMDADWTLLSVLGKPVVHSHDRLSALLRVHIGQEAQALLAEPVFAEAPAADGGADLRRPIGWRSPRGGALTP
LSAAANPGLLRDRFARLEREITALCARLSTQGEAGQSAAESLRLALITPEGGAWLYADHDQPVLVCWGLGRPGQAIAAGA
VGALSGAARAAAASAVSGSAAPVAPSPVGGAASPPPAGSPPPAEGAGSSPVAPAPGRRAWIAPALLALALLLLAGWLAWR
ALTPLAPVIVEAPAEAPADLSRLDDLGRTLAQLDQALGEARLAEDAFQKACVVPPEPTPEPTPAPPAAAPAPQPDPLPDR
AEGSPPPPAEAAPPEVKPEAPPPAAPAKPKPPITAAKPPAKVAPPAPAPAEPPAQPASRAACEPSWSPGREPRMIFVVDG
SGSMSEGIAGAPSRISAAKRSIRDTVNALHKDIRVGMVSFSDCMATQNSKYYSAAERPAFLAGVDAITPERATSLAASIR
RGGALATRRSETVMMVVSDGEDTCGGDPCAAARAVKAEKSNVIIHVIDLSGGGNSGVARCIASAGGGRVFTPGSAAQVTS
SLRTATGQPDASGCQ
>Mature_575_residues
MVSPTLKPAMDADWTLLSVLGKPVVHSHDRLSALLRVHIGQEAQALLAEPVFAEAPAADGGADLRRPIGWRSPRGGALTP
LSAAANPGLLRDRFARLEREITALCARLSTQGEAGQSAAESLRLALITPEGGAWLYADHDQPVLVCWGLGRPGQAIAAGA
VGALSGAARAAAASAVSGSAAPVAPSPVGGAASPPPAGSPPPAEGAGSSPVAPAPGRRAWIAPALLALALLLLAGWLAWR
ALTPLAPVIVEAPAEAPADLSRLDDLGRTLAQLDQALGEARLAEDAFQKACVVPPEPTPEPTPAPPAAAPAPQPDPLPDR
AEGSPPPPAEAAPPEVKPEAPPPAAPAKPKPPITAAKPPAKVAPPAPAPAEPPAQPASRAACEPSWSPGREPRMIFVVDG
SGSMSEGIAGAPSRISAAKRSIRDTVNALHKDIRVGMVSFSDCMATQNSKYYSAAERPAFLAGVDAITPERATSLAASIR
RGGALATRRSETVMMVVSDGEDTCGGDPCAAARAVKAEKSNVIIHVIDLSGGGNSGVARCIASAGGGRVFTPGSAAQVTS
SLRTATGQPDASGCQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57922; Mature: 57922

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSPTLKPAMDADWTLLSVLGKPVVHSHDRLSALLRVHIGQEAQALLAEPVFAEAPAADG
CCCCCCCCCCCCCHHHHHHHCCCHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHCCCCCCC
GADLRRPIGWRSPRGGALTPLSAAANPGLLRDRFARLEREITALCARLSTQGEAGQSAAE
CHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC
SLRLALITPEGGAWLYADHDQPVLVCWGLGRPGQAIAAGAVGALSGAARAAAASAVSGSA
CEEEEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
APVAPSPVGGAASPPPAGSPPPAEGAGSSPVAPAPGRRAWIAPALLALALLLLAGWLAWR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALTPLAPVIVEAPAEAPADLSRLDDLGRTLAQLDQALGEARLAEDAFQKACVVPPEPTPE
HHCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PTPAPPAAAPAPQPDPLPDRAEGSPPPPAEAAPPEVKPEAPPPAAPAKPKPPITAAKPPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KVAPPAPAPAEPPAQPASRAACEPSWSPGREPRMIFVVDGSGSMSEGIAGAPSRISAAKR
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
SIRDTVNALHKDIRVGMVSFSDCMATQNSKYYSAAERPAFLAGVDAITPERATSLAASIR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHH
RGGALATRRSETVMMVVSDGEDTCGGDPCAAARAVKAEKSNVIIHVIDLSGGGNSGVARC
HCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHH
IASAGGGRVFTPGSAAQVTSSLRTATGQPDASGCQ
HHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVSPTLKPAMDADWTLLSVLGKPVVHSHDRLSALLRVHIGQEAQALLAEPVFAEAPAADG
CCCCCCCCCCCCCHHHHHHHCCCHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHCCCCCCC
GADLRRPIGWRSPRGGALTPLSAAANPGLLRDRFARLEREITALCARLSTQGEAGQSAAE
CHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC
SLRLALITPEGGAWLYADHDQPVLVCWGLGRPGQAIAAGAVGALSGAARAAAASAVSGSA
CEEEEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
APVAPSPVGGAASPPPAGSPPPAEGAGSSPVAPAPGRRAWIAPALLALALLLLAGWLAWR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALTPLAPVIVEAPAEAPADLSRLDDLGRTLAQLDQALGEARLAEDAFQKACVVPPEPTPE
HHCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PTPAPPAAAPAPQPDPLPDRAEGSPPPPAEAAPPEVKPEAPPPAAPAKPKPPITAAKPPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KVAPPAPAPAEPPAQPASRAACEPSWSPGREPRMIFVVDGSGSMSEGIAGAPSRISAAKR
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
SIRDTVNALHKDIRVGMVSFSDCMATQNSKYYSAAERPAFLAGVDAITPERATSLAASIR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHH
RGGALATRRSETVMMVVSDGEDTCGGDPCAAARAVKAEKSNVIIHVIDLSGGGNSGVARC
HCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHH
IASAGGGRVFTPGSAAQVTSSLRTATGQPDASGCQ
HHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA