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The map label for this gene is ybhS [H]

Identifier: 83594459

GI number: 83594459

Start: 3607832

End: 3608968

Strand: Reverse

Name: ybhS [H]

Synonym: Rru_A3129

Alternate gene names: 83594459

Gene position: 3608968-3607832 (Counterclockwise)

Preceding gene: 83594460

Following gene: 83594457

Centisome position: 82.91

GC content: 60.69

Gene sequence:

>1137_bases
GTGAGTCGGTATTTTTCGTTTTCGCGCATGGCGGCGATCTTCTTCAAGGAACTGATCCAGATGCGCCGCGACCGGTTGAC
CTTTGGCATGATGCTGAGCGTGCCGATGCTGCAGCTGATCTTGTTCGGTTTCGCCATCAACACCGATCCCAAGCATCTGG
CGACCGTTCTCAATATCCAGTCGCCTTCGGCCTTTTCGCGCGACCTGACGGCGGCGATGAGCAATTCGGGGTATTTCGAC
ATCATCGGCGAAGTGTCGAGCGAGGCGGAAATCGACCGCCTGCTGGATATGGGCGAAGTCCAGTTCGTGCTGACCATCCC
GCCCGAGTTCTCAAGCGAATTGCAAAAGGGCAACCGCCCGGTGGTGCTGATGGAGGTCGACGCCACCGATCCGGCGGCGA
CCAGCAATGCCCTTCACGTGATCGGCCAATTGGCGCGCACCGCCTTTGACCGCCATCTGGTCGGGCCGCTGGCTCCCTTG
AAGGTGGGCGAGGACCCGATCGATCTGCGCATCCATTCCCGCTACAACCCCGAGGCCAACAGCCAGTACAACGTCGTGCC
CGGGCTGATGGGGGTGATCTTGACCATGACCATGGTGATGATGACCTCGCTGGCGATCACCCGCGAACGCGAGCGCGACA
CCATGGAAACCCTGCTGTCGATGCCGGTGCGGCCGCTGGAGGTGATGATCGGCAAGATCCTGCCCTATATCGGCCTGGGC
TATATCCAGATTATCGTCGTGCTAATCGCCGCCCGCTTGCTGTTCGATGTGCCGGTGGTCGGTAGTCTTGGCCTGCTCGC
CCTGCTGCTTTTGCTGTTCATCGCCGCCAATCTGGCCATCGGCCTGACCTTCTCGGCGCTCTCGGCCAATCAGTTCCAGG
CCATGCAGATGAGCTTCTTCTATTTTCTGCCCGCCCTTTTGCTCTCGGGCTTCATGTTCCCCTTTCGCGGCATGCCGGTC
TGGGCCCAGGTTCTGGGCGAGATCCTGCCGCTGACCCATTTCCTGCGGGTGGTGCGCGGCATCCTTCTAAAGGGCAACGG
CTTTTGGCAGGTCTGGCCCGAACTCTGGCCCCAGGCCCTGTTCACCCTGGTCGCCTTCGCCATCGCCCTGAAGGTCTTCC
GCAAAACCCTTGATTAG

Upstream 100 bases:

>100_bases
TGGTCGGCCGCTATCGCCATCTGCCCGGCACCACCTGGACCGCCGTCGAGCCCGGTCTGGAGGATGTGTTCATCCATCTG
ATGGAGGGGGAATCGGGGCA

Downstream 100 bases:

>100_bases
AAACGCCGGCGATAGACTGCCGGGGTTTCCCCGAAGGTGCGGCGAAACAGGCTGATGAAGGCGCTGGCCGTCGCATAGCC
CAGATCCAGGGCGATGGTCG

Product: ABC-2 transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSRYFSFSRMAAIFFKELIQMRRDRLTFGMMLSVPMLQLILFGFAINTDPKHLATVLNIQSPSAFSRDLTAAMSNSGYFD
IIGEVSSEAEIDRLLDMGEVQFVLTIPPEFSSELQKGNRPVVLMEVDATDPAATSNALHVIGQLARTAFDRHLVGPLAPL
KVGEDPIDLRIHSRYNPEANSQYNVVPGLMGVILTMTMVMMTSLAITRERERDTMETLLSMPVRPLEVMIGKILPYIGLG
YIQIIVVLIAARLLFDVPVVGSLGLLALLLLLFIAANLAIGLTFSALSANQFQAMQMSFFYFLPALLLSGFMFPFRGMPV
WAQVLGEILPLTHFLRVVRGILLKGNGFWQVWPELWPQALFTLVAFAIALKVFRKTLD

Sequences:

>Translated_378_residues
MSRYFSFSRMAAIFFKELIQMRRDRLTFGMMLSVPMLQLILFGFAINTDPKHLATVLNIQSPSAFSRDLTAAMSNSGYFD
IIGEVSSEAEIDRLLDMGEVQFVLTIPPEFSSELQKGNRPVVLMEVDATDPAATSNALHVIGQLARTAFDRHLVGPLAPL
KVGEDPIDLRIHSRYNPEANSQYNVVPGLMGVILTMTMVMMTSLAITRERERDTMETLLSMPVRPLEVMIGKILPYIGLG
YIQIIVVLIAARLLFDVPVVGSLGLLALLLLLFIAANLAIGLTFSALSANQFQAMQMSFFYFLPALLLSGFMFPFRGMPV
WAQVLGEILPLTHFLRVVRGILLKGNGFWQVWPELWPQALFTLVAFAIALKVFRKTLD
>Mature_377_residues
SRYFSFSRMAAIFFKELIQMRRDRLTFGMMLSVPMLQLILFGFAINTDPKHLATVLNIQSPSAFSRDLTAAMSNSGYFDI
IGEVSSEAEIDRLLDMGEVQFVLTIPPEFSSELQKGNRPVVLMEVDATDPAATSNALHVIGQLARTAFDRHLVGPLAPLK
VGEDPIDLRIHSRYNPEANSQYNVVPGLMGVILTMTMVMMTSLAITRERERDTMETLLSMPVRPLEVMIGKILPYIGLGY
IQIIVVLIAARLLFDVPVVGSLGLLALLLLLFIAANLAIGLTFSALSANQFQAMQMSFFYFLPALLLSGFMFPFRGMPVW
AQVLGEILPLTHFLRVVRGILLKGNGFWQVWPELWPQALFTLVAFAIALKVFRKTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=349, Percent_Identity=28.6532951289398, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787010, Length=369, Percent_Identity=27.3712737127371, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI48994943, Length=355, Percent_Identity=25.6338028169014, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI226510979, Length=359, Percent_Identity=29.2479108635098, Blast_Score=114, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24650855, Length=377, Percent_Identity=24.6684350132626, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650853, Length=377, Percent_Identity=24.6684350132626, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85725260, Length=370, Percent_Identity=21.6216216216216, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85725262, Length=370, Percent_Identity=21.6216216216216, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42165; Mature: 42034

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYFSFSRMAAIFFKELIQMRRDRLTFGMMLSVPMLQLILFGFAINTDPKHLATVLNIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
SPSAFSRDLTAAMSNSGYFDIIGEVSSEAEIDRLLDMGEVQFVLTIPPEFSSELQKGNRP
CCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCC
VVLMEVDATDPAATSNALHVIGQLARTAFDRHLVGPLAPLKVGEDPIDLRIHSRYNPEAN
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCC
SQYNVVPGLMGVILTMTMVMMTSLAITRERERDTMETLLSMPVRPLEVMIGKILPYIGLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YIQIIVVLIAARLLFDVPVVGSLGLLALLLLLFIAANLAIGLTFSALSANQFQAMQMSFF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YFLPALLLSGFMFPFRGMPVWAQVLGEILPLTHFLRVVRGILLKGNGFWQVWPELWPQAL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
FTLVAFAIALKVFRKTLD
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRYFSFSRMAAIFFKELIQMRRDRLTFGMMLSVPMLQLILFGFAINTDPKHLATVLNIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
SPSAFSRDLTAAMSNSGYFDIIGEVSSEAEIDRLLDMGEVQFVLTIPPEFSSELQKGNRP
CCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCC
VVLMEVDATDPAATSNALHVIGQLARTAFDRHLVGPLAPLKVGEDPIDLRIHSRYNPEAN
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCC
SQYNVVPGLMGVILTMTMVMMTSLAITRERERDTMETLLSMPVRPLEVMIGKILPYIGLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YIQIIVVLIAARLLFDVPVVGSLGLLALLLLLFIAANLAIGLTFSALSANQFQAMQMSFF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YFLPALLLSGFMFPFRGMPVWAQVLGEILPLTHFLRVVRGILLKGNGFWQVWPELWPQAL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
FTLVAFAIALKVFRKTLD
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]