| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594450
Identifier: 83594450
GI number: 83594450
Start: 3598607
End: 3600178
Strand: Direct
Name: 83594450
Synonym: Rru_A3120
Alternate gene names: NA
Gene position: 3598607-3600178 (Clockwise)
Preceding gene: 83594449
Following gene: 83594451
Centisome position: 82.67
GC content: 69.21
Gene sequence:
>1572_bases ATGAACAGGGGAAGAGAACCGCTGGTCGCAACCGCGCCTTTGGCCCCCCGCTGGGCGATCGGCGGCGCGGACGCTTCGGC TTTGGCCCTGGGAACGGCGATCTGCCTGGGGATCTTTCTGCTGTTTTTCGAGACCTTCGGCTCGATGATCGGGCTGTGGG CGACCATCGCCGATTACCATCATTCCTTCGCCGTCATCCCCTGCGCCCTGTGGCTGGGGTGGGAGCGGCGCGACCTGGTG CGCGGCGTGGCCTTCGCCCCCTGGCCTTTGGCCTTCCTGGCGGTCGTCGGCGCCGCCCTGCTCTGGCTGGCCGGACGCCT GGGCAGCGTGCAGTTCGTCGAGCATCTCGGCGTGATCTTGCTGCTGCAAAGCGCCCTGATCGCCGCCCTTGGCCAAGGGT TCGCCAAGGCGATGGCCCTGCCTTTGGCCTTTCTGATCTTCCTTCTGCCCATCGGCGACGCCCTGATCCCCTCGCTCCAG GCCATCACCGCCTCGCTGGCGGCCAACGGTCTGGCGCTGTTTGACGTGCCGGTCTTTCACGACGGGGTTTTCCTGATCAC GCCCTTTGGCAATTTCGAGGTCGCCCAGGAATGCTCGGGGTTGCGCTTCCTGGTCGCCACCTTGACCTTCGGGGCGGTGA TCAGCGCCGTCGTCCACCGCTCGGCGTGGCGACGGGCGCTGTTTTTGCTCTCTTGCGCTATCGTGCCCGTTCTGGCCAAT GGCCTGAGGGTGATCGGCATCATTTTACTGGCCCGACACGCCGGCCACGAAACCGCCGCCGCTTTCGATCATGTCATCTA TGGCTGGGTTTTCCTGAGCCTGGTCAGCGTCTTCATCTTCGCCCTTGGCTGGCTGACGCGCGAGCCGCCGCGACCGCTCC GGCGCAAGGGCGCGCACCCGCCGTCTTCGGCGCGCCCCTTGCGCCCGCTGCGGACGGGGATCGCGGTTCTCGCCCTGGCC GCCACCCCGGTCGCGGCCAATGCGGCGATCGAGACCTCGCTGGCCGGCCGCCTCGCCCCAGCGGCGCTGATCCTGCCGGC GCCGGGCCCAGCCAGCACCGCCGATCCGCTGTGGACTCCCCAGATCCCCGGCGCCGATCTCGTTGATCATCGGGCCTTCC TGATCGGCGGCCGGGCGGTGGACCGGGTGATCGCCTATTTCACCCACCAGCGCCAAGGCGCCGAGGCCGTTTCGGCCACC ATCGATCCGGCCGGGCTGGAGATGGTCAGCCAAGGCGAGCGCGTCGTCGCCCTTACCGACCCCGTCGCCGGCTTGGCGGC GGTTCGCGAAAGAGTGATCGCCGGACCGGGCCGCCAGCGCCTTGTCTGGTCGTGGCTTTGGGTCGGTGGCCATTTCACCA CCGATGCCAAGGCGGCCAAGATCTTCCAGGTGCTGGGCGTCTTGCCCGGCGGCCAGCCCGCCGCCGCCCTGGTGATGATC TCGGTCCCGCTCGCCGCCGCCCCGGCATCCCCCCAGGCTCTCGACGACGCCCGGGCCCTGCTTGGCCGCTTCCTCGCCGG CCAAGGGGATCTCGGCCCGGGCCTCGCCCTCGCCCAAGAGAAGGACCGCTGA
Upstream 100 bases:
>100_bases GAACCCGCTTCTTGTCGTCGCTGACCCGCTCGAAGCCCTACGAATATTACCTTCACAAATAAGCGATGGCGGGCACAAAT AGGCGATGGCGGGGAAGCCG
Downstream 100 bases:
>100_bases GCATGTGTGGACTCGTCGGCATCTACCATCCCACCGCCTCCCGGCCGGTCGATCGCGCCCTGGTCGAGGCGATGAACCAG CGCCAGTTTCACCGGGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MNRGREPLVATAPLAPRWAIGGADASALALGTAICLGIFLLFFETFGSMIGLWATIADYHHSFAVIPCALWLGWERRDLV RGVAFAPWPLAFLAVVGAALLWLAGRLGSVQFVEHLGVILLLQSALIAALGQGFAKAMALPLAFLIFLLPIGDALIPSLQ AITASLAANGLALFDVPVFHDGVFLITPFGNFEVAQECSGLRFLVATLTFGAVISAVVHRSAWRRALFLLSCAIVPVLAN GLRVIGIILLARHAGHETAAAFDHVIYGWVFLSLVSVFIFALGWLTREPPRPLRRKGAHPPSSARPLRPLRTGIAVLALA ATPVAANAAIETSLAGRLAPAALILPAPGPASTADPLWTPQIPGADLVDHRAFLIGGRAVDRVIAYFTHQRQGAEAVSAT IDPAGLEMVSQGERVVALTDPVAGLAAVRERVIAGPGRQRLVWSWLWVGGHFTTDAKAAKIFQVLGVLPGGQPAAALVMI SVPLAAAPASPQALDDARALLGRFLAGQGDLGPGLALAQEKDR
Sequences:
>Translated_523_residues MNRGREPLVATAPLAPRWAIGGADASALALGTAICLGIFLLFFETFGSMIGLWATIADYHHSFAVIPCALWLGWERRDLV RGVAFAPWPLAFLAVVGAALLWLAGRLGSVQFVEHLGVILLLQSALIAALGQGFAKAMALPLAFLIFLLPIGDALIPSLQ AITASLAANGLALFDVPVFHDGVFLITPFGNFEVAQECSGLRFLVATLTFGAVISAVVHRSAWRRALFLLSCAIVPVLAN GLRVIGIILLARHAGHETAAAFDHVIYGWVFLSLVSVFIFALGWLTREPPRPLRRKGAHPPSSARPLRPLRTGIAVLALA ATPVAANAAIETSLAGRLAPAALILPAPGPASTADPLWTPQIPGADLVDHRAFLIGGRAVDRVIAYFTHQRQGAEAVSAT IDPAGLEMVSQGERVVALTDPVAGLAAVRERVIAGPGRQRLVWSWLWVGGHFTTDAKAAKIFQVLGVLPGGQPAAALVMI SVPLAAAPASPQALDDARALLGRFLAGQGDLGPGLALAQEKDR >Mature_523_residues MNRGREPLVATAPLAPRWAIGGADASALALGTAICLGIFLLFFETFGSMIGLWATIADYHHSFAVIPCALWLGWERRDLV RGVAFAPWPLAFLAVVGAALLWLAGRLGSVQFVEHLGVILLLQSALIAALGQGFAKAMALPLAFLIFLLPIGDALIPSLQ AITASLAANGLALFDVPVFHDGVFLITPFGNFEVAQECSGLRFLVATLTFGAVISAVVHRSAWRRALFLLSCAIVPVLAN GLRVIGIILLARHAGHETAAAFDHVIYGWVFLSLVSVFIFALGWLTREPPRPLRRKGAHPPSSARPLRPLRTGIAVLALA ATPVAANAAIETSLAGRLAPAALILPAPGPASTADPLWTPQIPGADLVDHRAFLIGGRAVDRVIAYFTHQRQGAEAVSAT IDPAGLEMVSQGERVVALTDPVAGLAAVRERVIAGPGRQRLVWSWLWVGGHFTTDAKAAKIFQVLGVLPGGQPAAALVMI SVPLAAAPASPQALDDARALLGRFLAGQGDLGPGLALAQEKDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54929; Mature: 54929
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRGREPLVATAPLAPRWAIGGADASALALGTAICLGIFLLFFETFGSMIGLWATIADYH CCCCCCCCEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSFAVIPCALWLGWERRDLVRGVAFAPWPLAFLAVVGAALLWLAGRLGSVQFVEHLGVIL CHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LLQSALIAALGQGFAKAMALPLAFLIFLLPIGDALIPSLQAITASLAANGLALFDVPVFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCEEE DGVFLITPFGNFEVAQECSGLRFLVATLTFGAVISAVVHRSAWRRALFLLSCAIVPVLAN CCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRVIGIILLARHAGHETAAAFDHVIYGWVFLSLVSVFIFALGWLTREPPRPLRRKGAHP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC PSSARPLRPLRTGIAVLALAATPVAANAAIETSLAGRLAPAALILPAPGPASTADPLWTP CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC QIPGADLVDHRAFLIGGRAVDRVIAYFTHQRQGAEAVSATIDPAGLEMVSQGERVVALTD CCCCCCHHHCCHHEECCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHCCCEEEEECC PVAGLAAVRERVIAGPGRQRLVWSWLWVGGHFTTDAKAAKIFQVLGVLPGGQPAAALVMI CHHHHHHHHHHHHCCCCCCCEEEEEEEECCEECCCHHHHHHHHHHHCCCCCCCHHEEEEE SVPLAAAPASPQALDDARALLGRFLAGQGDLGPGLALAQEKDR ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRGREPLVATAPLAPRWAIGGADASALALGTAICLGIFLLFFETFGSMIGLWATIADYH CCCCCCCCEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSFAVIPCALWLGWERRDLVRGVAFAPWPLAFLAVVGAALLWLAGRLGSVQFVEHLGVIL CHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LLQSALIAALGQGFAKAMALPLAFLIFLLPIGDALIPSLQAITASLAANGLALFDVPVFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCEEE DGVFLITPFGNFEVAQECSGLRFLVATLTFGAVISAVVHRSAWRRALFLLSCAIVPVLAN CCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRVIGIILLARHAGHETAAAFDHVIYGWVFLSLVSVFIFALGWLTREPPRPLRRKGAHP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC PSSARPLRPLRTGIAVLALAATPVAANAAIETSLAGRLAPAALILPAPGPASTADPLWTP CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC QIPGADLVDHRAFLIGGRAVDRVIAYFTHQRQGAEAVSATIDPAGLEMVSQGERVVALTD CCCCCCHHHCCHHEECCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHCCCEEEEECC PVAGLAAVRERVIAGPGRQRLVWSWLWVGGHFTTDAKAAKIFQVLGVLPGGQPAAALVMI CHHHHHHHHHHHHCCCCCCCEEEEEEEECCEECCCHHHHHHHHHHHCCCCCCCHHEEEEE SVPLAAAPASPQALDDARALLGRFLAGQGDLGPGLALAQEKDR ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA