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The map label for this gene is 83594448

Identifier: 83594448

GI number: 83594448

Start: 3595958

End: 3597556

Strand: Direct

Name: 83594448

Synonym: Rru_A3118

Alternate gene names: NA

Gene position: 3595958-3597556 (Clockwise)

Preceding gene: 83594439

Following gene: 83594449

Centisome position: 82.61

GC content: 63.79

Gene sequence:

>1599_bases
GTGAACGCGATTTTCGAGGCCCTTCTCTCCCATGTTCCCGCCATGTGGCGCCGCCGTTGGATCGTCATGGTGGTGGCCTG
GGTGGCGTGCCTTGTCGGCTGGGGCGCCGTCGCCCTCATCCCCAATGTCTATTCGACGGCGACGACGGTTTATGTTGAAA
CCGAGTCCCTGTTGCGCCCGCTGCTCCAGGGCATGACCATCGATGTCGGCACCGACAAGCTCCGCATCATGAACCAGACC
CTGACCAGCCGGCCCAACCTGGAAAAGGTGGTGCGGGTGGTCGGCCTCGGCGGTTCCTCGCCCGCCGATTTCAACGCGGC
GGTCACCAAGGTGCAAAAGGATATTTCGGTCCGCATGTCGGAACGCAATAACACCTTCACTATTTCCTATGGCGCCCGCG
ATCCCGAAGTCGCCTTCCGCGTCGTCGACACCTTGTTGACCATCTTCGTTGAAAGCAATCTTGGCTTCGCCCGCCAGGAA
CTTGACGTCGCCCGCGAGTTCATCGGCAAGCAGGTCAAGGAATACGAAGAGCGGGTCGCCGAGGCCGAGCGCAAACTTGC
CGACTTCAAGCGCGAGAACACCGAGTTCCTGCCCGGGGCCTCGACCTACCGCGAGTATCTCGACGGCCTGCGCCGCGAGA
CGGCGGCGATCGCCGCCGAAATCGCCGATACCAAGGCCAAGGTCGCCTCGATGACCACCCAGCTTGGCGATCTCAAGCCG
ATGGTTCCCTCAGGGGGGGCGGCGGCGATGTCGCCGCTGCAGATGCGGGTCGAGCAGATGCGAGCCTCGCTCGACGATCT
TAAGTTGCGCTATACGGAAAAGCATCCGGCGATGGAGGAGACGCGCCGGCAACTGGCGATCCTTGAAGATCGCCTGCGCA
GCGAGGGCGGATCGTCCGCCGGCGGGATGGGGGCCATTCCCAATCCGGTCTATGAGAACGTCCGCATGGAAAAGGTCGCC
CTGACGGCGCAGATCGCCGCCTTGGAAAACCGTTTCACCCGCAAGACCGAGGAAGTGGCCCAACTGGAGGCGAAGGCGCC
CCGGGTTCCCGAGGTCGAGGCCGAGTTTACCCGACTGACCCGTGACGCCGAGCTGGTCCGCCGCCAGTTCGAGGAGCTCC
AGGCCCGCCAGGAGGCGGCCAAGCTGTCGCAAAGTCGGGAAATGGAAGCCGAAAAGGTCCAGTTCCGGGTGATCAACCCG
CCGCAGAAGGCCCAGCATCCCTCGGGCATCAAGCGGTCCTTGCTGATTACGGCGGTGCTGTTTGGCGGCCTTGGCCTGGG
GCTGGCCCTGACCTTCCTGATCAGCGCCATGCAATCGACCTTTTATAGTCCCTATCGCATCATCCATGCGCTGGGCGTGC
CGGTGATCGGAACGATCTCGTTCATCGCCCCCCGGCGAACCCTTGGCTCCAAGCTGGCCCTCGGCTCGTTCAGCGCCAGC
GCCTTGCTGCTGGTCGTCGCCTGGATGGCCCTGATGCTGGTGGAATACCAATGGGGACTGCCCACCTTGCTGCCGCAGCG
GCTGCAAGACCAGTTCTCCTTCCCGATGACCGCGTCGCTCGCCAGTGGCCATTCCCTCCCGGCACAGCCGGCGGTTTGA

Upstream 100 bases:

>100_bases
TCCTCTTCTCGAAAAAAAGACGCAATGATAAGTTCGATCCGTGAAAATTAAGTCTCCGAGACCGCCCGCCCTTCGCCCAT
CCTCGAAAAGGGAACTCTGA

Downstream 100 bases:

>100_bases
TGCCATGAGCAAGGAGGATACCCTGGATAAGACGACCCAGCCGCCGCGCCCTCTCTCCACCGTCGAGCGAGCCGCCCGGC
TGCTGATCGACGCCGCGTCC

Product: lipopolysaccharide biosynthesis

Products: NA

Alternate protein names: Polysaccharide Chain Length Determinant Protein; Lipopolysaccharide Biosynthesis Protein; Chain Length Determinant Protein; Chain Length Determinant Family Protein; Chain Length Regulator; Polysaccharide Export Protein; Exopolysaccharide Biosynthesis Protein; PEP-CTERM Locus Polysaccharide Chain Length Determinant

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MNAIFEALLSHVPAMWRRRWIVMVVAWVACLVGWGAVALIPNVYSTATTVYVETESLLRPLLQGMTIDVGTDKLRIMNQT
LTSRPNLEKVVRVVGLGGSSPADFNAAVTKVQKDISVRMSERNNTFTISYGARDPEVAFRVVDTLLTIFVESNLGFARQE
LDVAREFIGKQVKEYEERVAEAERKLADFKRENTEFLPGASTYREYLDGLRRETAAIAAEIADTKAKVASMTTQLGDLKP
MVPSGGAAAMSPLQMRVEQMRASLDDLKLRYTEKHPAMEETRRQLAILEDRLRSEGGSSAGGMGAIPNPVYENVRMEKVA
LTAQIAALENRFTRKTEEVAQLEAKAPRVPEVEAEFTRLTRDAELVRRQFEELQARQEAAKLSQSREMEAEKVQFRVINP
PQKAQHPSGIKRSLLITAVLFGGLGLGLALTFLISAMQSTFYSPYRIIHALGVPVIGTISFIAPRRTLGSKLALGSFSAS
ALLLVVAWMALMLVEYQWGLPTLLPQRLQDQFSFPMTASLASGHSLPAQPAV

Sequences:

>Translated_532_residues
MNAIFEALLSHVPAMWRRRWIVMVVAWVACLVGWGAVALIPNVYSTATTVYVETESLLRPLLQGMTIDVGTDKLRIMNQT
LTSRPNLEKVVRVVGLGGSSPADFNAAVTKVQKDISVRMSERNNTFTISYGARDPEVAFRVVDTLLTIFVESNLGFARQE
LDVAREFIGKQVKEYEERVAEAERKLADFKRENTEFLPGASTYREYLDGLRRETAAIAAEIADTKAKVASMTTQLGDLKP
MVPSGGAAAMSPLQMRVEQMRASLDDLKLRYTEKHPAMEETRRQLAILEDRLRSEGGSSAGGMGAIPNPVYENVRMEKVA
LTAQIAALENRFTRKTEEVAQLEAKAPRVPEVEAEFTRLTRDAELVRRQFEELQARQEAAKLSQSREMEAEKVQFRVINP
PQKAQHPSGIKRSLLITAVLFGGLGLGLALTFLISAMQSTFYSPYRIIHALGVPVIGTISFIAPRRTLGSKLALGSFSAS
ALLLVVAWMALMLVEYQWGLPTLLPQRLQDQFSFPMTASLASGHSLPAQPAV
>Mature_532_residues
MNAIFEALLSHVPAMWRRRWIVMVVAWVACLVGWGAVALIPNVYSTATTVYVETESLLRPLLQGMTIDVGTDKLRIMNQT
LTSRPNLEKVVRVVGLGGSSPADFNAAVTKVQKDISVRMSERNNTFTISYGARDPEVAFRVVDTLLTIFVESNLGFARQE
LDVAREFIGKQVKEYEERVAEAERKLADFKRENTEFLPGASTYREYLDGLRRETAAIAAEIADTKAKVASMTTQLGDLKP
MVPSGGAAAMSPLQMRVEQMRASLDDLKLRYTEKHPAMEETRRQLAILEDRLRSEGGSSAGGMGAIPNPVYENVRMEKVA
LTAQIAALENRFTRKTEEVAQLEAKAPRVPEVEAEFTRLTRDAELVRRQFEELQARQEAAKLSQSREMEAEKVQFRVINP
PQKAQHPSGIKRSLLITAVLFGGLGLGLALTFLISAMQSTFYSPYRIIHALGVPVIGTISFIAPRRTLGSKLALGSFSAS
ALLLVVAWMALMLVEYQWGLPTLLPQRLQDQFSFPMTASLASGHSLPAQPAV

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58869; Mature: 58869

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIFEALLSHVPAMWRRRWIVMVVAWVACLVGWGAVALIPNVYSTATTVYVETESLLRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHEEEEEEHHHHHHH
LLQGMTIDVGTDKLRIMNQTLTSRPNLEKVVRVVGLGGSSPADFNAAVTKVQKDISVRMS
HHCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEE
ERNNTFTISYGARDPEVAFRVVDTLLTIFVESNLGFARQELDVAREFIGKQVKEYEERVA
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAERKLADFKRENTEFLPGASTYREYLDGLRRETAAIAAEIADTKAKVASMTTQLGDLKP
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MVPSGGAAAMSPLQMRVEQMRASLDDLKLRYTEKHPAMEETRRQLAILEDRLRSEGGSSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
GGMGAIPNPVYENVRMEKVALTAQIAALENRFTRKTEEVAQLEAKAPRVPEVEAEFTRLT
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RDAELVRRQFEELQARQEAAKLSQSREMEAEKVQFRVINPPQKAQHPSGIKRSLLITAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHCCCCCCHHHHHHHHHHH
FGGLGLGLALTFLISAMQSTFYSPYRIIHALGVPVIGTISFIAPRRTLGSKLALGSFSAS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCHHHHCCHHCCCCCHHH
ALLLVVAWMALMLVEYQWGLPTLLPQRLQDQFSFPMTASLASGHSLPAQPAV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNAIFEALLSHVPAMWRRRWIVMVVAWVACLVGWGAVALIPNVYSTATTVYVETESLLRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHEEEEEEHHHHHHH
LLQGMTIDVGTDKLRIMNQTLTSRPNLEKVVRVVGLGGSSPADFNAAVTKVQKDISVRMS
HHCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEE
ERNNTFTISYGARDPEVAFRVVDTLLTIFVESNLGFARQELDVAREFIGKQVKEYEERVA
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAERKLADFKRENTEFLPGASTYREYLDGLRRETAAIAAEIADTKAKVASMTTQLGDLKP
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MVPSGGAAAMSPLQMRVEQMRASLDDLKLRYTEKHPAMEETRRQLAILEDRLRSEGGSSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
GGMGAIPNPVYENVRMEKVALTAQIAALENRFTRKTEEVAQLEAKAPRVPEVEAEFTRLT
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RDAELVRRQFEELQARQEAAKLSQSREMEAEKVQFRVINPPQKAQHPSGIKRSLLITAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHCCCCCCHHHHHHHHHHH
FGGLGLGLALTFLISAMQSTFYSPYRIIHALGVPVIGTISFIAPRRTLGSKLALGSFSAS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCHHHHCCHHCCCCCHHH
ALLLVVAWMALMLVEYQWGLPTLLPQRLQDQFSFPMTASLASGHSLPAQPAV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA