| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594416
Identifier: 83594416
GI number: 83594416
Start: 3551436
End: 3552197
Strand: Reverse
Name: 83594416
Synonym: Rru_A3086
Alternate gene names: NA
Gene position: 3552197-3551436 (Counterclockwise)
Preceding gene: 83594420
Following gene: 83594415
Centisome position: 81.61
GC content: 72.05
Gene sequence:
>762_bases GTGGCCAAGCCGCCAGCCGATACCGATCCCCAACAGGATGCCCTTTTCCGCGAGGTCGAGGAAGACCTGCGTCATGAACG TCTGGCCGAAATCTGGAAACAGTACGGCGGGCTGATCATCGCGGCCGCCGTGGTGGTCGTTCTGGCGGTCGCCGGTGTTC AGGGCTGGCGGGTTTATCAGGCCGATCAGCGCGCCGAACAGGCCGCCCGTTTCGATGCCGCCCGCGACCGCCTAGCCAAG GGCGACAGCGCCGCGCTTGAGGATCTGGCCGCCCTGGCGGCGGACCGCTCTTCGGGCTATGCGCCGCTTGCCGCCTTGCG CCGCGCCGCCGCCCTGGCCGACGAGGGCAAGACCGACGAGGCGATTCAGGGCTATCGCGGCCTGATCAACGATAGCGCCG CCGATCCGGTGTTTCGCGATGCGGCGCGGGTGCTGGCCGTGCTTCACGGTCTGACCCTGCTTGATCCGGCCGAGATCGGC GGGTTGTTGCAGCCGCTGCGCGACGGTACCGGCCCCTGGCGGCCGCTGGCCGAGGAACTGGCGGCGGTGTCGAGCCTGCG CCAGGGCGACAGCAAGGCGGCGATCGAGATTTTGCGGGGGATCCTGGGCGATCCCCAGGCGCCGCGGGGCGTGCGCCAGC GCGCCGGCGGTCTGCTGGCCGCCCTGGGCGCCAGCCCGACTCCGCCGGCGGAGTCGGGCGAGAGCTCGTCTTCGGGCCCG GCTCCGGCCGCCCCCCCTGCCGGAGGCGGGAATGGCGGCTGA
Upstream 100 bases:
>100_bases AGCGCGCGCGGGCGATTGCCAAGGCGCGAGGCTGTGGCTATGGTGACGCGCGTTCGTCCGCCCGGACCCTATTGCCGTGC CTGCCCCTAAGGAGAGACGC
Downstream 100 bases:
>100_bases TCGGGCGATGGGTCGGCGGTTTGCCGCTCTGGTGCTAAGTGTGACCTTCAGTCTGGCCCTGGCCGGCTGTTCGGACACTT GGCTGGGTGATTCCTGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAKPPADTDPQQDALFREVEEDLRHERLAEIWKQYGGLIIAAAVVVVLAVAGVQGWRVYQADQRAEQAARFDAARDRLAK GDSAALEDLAALAADRSSGYAPLAALRRAAALADEGKTDEAIQGYRGLINDSAADPVFRDAARVLAVLHGLTLLDPAEIG GLLQPLRDGTGPWRPLAEELAAVSSLRQGDSKAAIEILRGILGDPQAPRGVRQRAGGLLAALGASPTPPAESGESSSSGP APAAPPAGGGNGG
Sequences:
>Translated_253_residues MAKPPADTDPQQDALFREVEEDLRHERLAEIWKQYGGLIIAAAVVVVLAVAGVQGWRVYQADQRAEQAARFDAARDRLAK GDSAALEDLAALAADRSSGYAPLAALRRAAALADEGKTDEAIQGYRGLINDSAADPVFRDAARVLAVLHGLTLLDPAEIG GLLQPLRDGTGPWRPLAEELAAVSSLRQGDSKAAIEILRGILGDPQAPRGVRQRAGGLLAALGASPTPPAESGESSSSGP APAAPPAGGGNGG >Mature_252_residues AKPPADTDPQQDALFREVEEDLRHERLAEIWKQYGGLIIAAAVVVVLAVAGVQGWRVYQADQRAEQAARFDAARDRLAKG DSAALEDLAALAADRSSGYAPLAALRRAAALADEGKTDEAIQGYRGLINDSAADPVFRDAARVLAVLHGLTLLDPAEIGG LLQPLRDGTGPWRPLAEELAAVSSLRQGDSKAAIEILRGILGDPQAPRGVRQRAGGLLAALGASPTPPAESGESSSSGPA PAAPPAGGGNGG
Specific function: Unknown
COG id: COG4649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26083; Mature: 25952
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPPADTDPQQDALFREVEEDLRHERLAEIWKQYGGLIIAAAVVVVLAVAGVQGWRVYQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH ADQRAEQAARFDAARDRLAKGDSAALEDLAALAADRSSGYAPLAALRRAAALADEGKTDE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH AIQGYRGLINDSAADPVFRDAARVLAVLHGLTLLDPAEIGGLLQPLRDGTGPWRPLAEEL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHH AAVSSLRQGDSKAAIEILRGILGDPQAPRGVRQRAGGLLAALGASPTPPAESGESSSSGP HHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC APAAPPAGGGNGG CCCCCCCCCCCCC >Mature Secondary Structure AKPPADTDPQQDALFREVEEDLRHERLAEIWKQYGGLIIAAAVVVVLAVAGVQGWRVYQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH ADQRAEQAARFDAARDRLAKGDSAALEDLAALAADRSSGYAPLAALRRAAALADEGKTDE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH AIQGYRGLINDSAADPVFRDAARVLAVLHGLTLLDPAEIGGLLQPLRDGTGPWRPLAEEL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHH AAVSSLRQGDSKAAIEILRGILGDPQAPRGVRQRAGGLLAALGASPTPPAESGESSSSGP HHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC APAAPPAGGGNGG CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA