| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is engA [H]
Identifier: 83594414
GI number: 83594414
Start: 3548482
End: 3549984
Strand: Reverse
Name: engA [H]
Synonym: Rru_A3084
Alternate gene names: 83594414
Gene position: 3549984-3548482 (Counterclockwise)
Preceding gene: 83594415
Following gene: 83594413
Centisome position: 81.56
GC content: 66.2
Gene sequence:
>1503_bases ATGTTCACTGTCGCCATCATCGGCCGGCCCAATGTGGGCAAGTCCACCCTGTTCAACCGGCTGTGCGGTCGCCGGCTGGC CATCGTCCATGACATGCCCGGCGTGACCCGCGACCGCCGCGAGGGCAAGGCCTCGCTGGCCGATCTGGTCTTCCGGGTGG TCGATACCGCCGGTCTGGAAGAGGCGGGCCCCGAGGTGCTGGAAGGCCGCATGCGCCAGCAGACCGACCGCGCCCTGTCG GAGGCCCATGTCGCCCTGATGCTGATCGACTCGCGGGCCGGGGTGACGCCGCTCGACGCCCATTTCGCCGAGATTCTGCG CAAGGCGCCGATCCCGGTGATTCTGGTCGCCAATAAATGCGAAGGCGGGGCGGGCAAGCCCGGTTTCTACGAATCCTACA GCATGGGCCTGGGTGATCCGGTGCCGTTGTCGGCCGAGCATGGCGAAGGGCTGTCGCTGCTCTATGAAGCCCTTATGCCG ATCTATGACGCCCATATGGCCCAGGAGGCCAAGGACGAGGCCGACGCCGTGCGCGCCGCCTTCCTGGAAACCGAAGCCGC GAGCGCGGCCAAGCCCTATATCGATTTCGCCTCCCTCGAACCCGACGAGGTTCCCGAGGACGACGACTCCGATCCCTCGC AAGATCCCGAGGATGATTTCTCGGTCGAGGCCTTCGATCCGCGCGGCGAACGGCCGATCCAAATGGCGATCATCGGCCGG CCCAACACCGGCAAGTCGACCCTGATCAACCGCCTGATCGGCGATGACCGGCTGGTCACCGGCCCCGAGGCCGGCGTGAC TCGCGATGCCATCGAGGTCGATTGGGAATGGGGCGGCCGGCGGTTCCGGCTGGTCGATACCGCCGGTCTGCGGCGCAAGG CCCGGGTCGAGAACAGCCTGGAAAAGCTGATGGTGGCCGATACCCTGAACGCCATCCGTCTGGCCGAGGTCTGCGTGCTG ATGCTCGACGCCAATATGGTGATGGACCGCCAGGACCTGACCATTGCCCGGCTGGTCATCGACGAGGGCCGGGCCCTGGT CATCGCCGTCAACAAATGGGATGCCTGCGCCGATCGCAAGGCCGCGCTGCAGCGGCTGGCCGATCGGCTGGAAACCTCGC TGGCCCAGGTGCGCGGCGTTCCCTTCGTCACCCTGTCGGCTTTGGAGGGCCATGGCCTCAATCGCCTGATGGACGCGGCG TTGGAAGCCCATGCCAAATGGAACCGCCGGGTGCCGACCAGCCGCTTCAATCGCTGGCTGAAGGGCATGATCGACCGCCA TCCGCTGCCGATGGGCAAGCATGGCCGACGCCTGCGCATCCGCTATGGCACCCAGGCCAAGATCCGGCCGCCGACCTTCG CCCTGTTCATGACCCGGCCCGATGATCTGCCCGAATCCTATGTGCGGTATCTGAATTCGGGGCTGCGCGAGGATTTCGAC ATGGCCGGCACGCCGATCCGCCTGCTGTTCCGCGCCACCAAGAACCCCTACGCCGATAAATAG
Upstream 100 bases:
>100_bases CGCTGATCCCGTTTTCCGCCCCATATGCAAAGGGCGGAAAAGGGGCCGGGTCGGACGGCCGTTCCGGGGCGGGACCCCGG AACCAATGGATATCTGAAAT
Downstream 100 bases:
>100_bases CCGGTGGTAACCCGGGGGTGACTCCTTGGCAGAGAAGGAAAACGGCCCCAGATCACCGGGGTCTTTTTCTTTTTTGAAAG GGGGGGTCCCATGGGGTCCT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MFTVAIIGRPNVGKSTLFNRLCGRRLAIVHDMPGVTRDRREGKASLADLVFRVVDTAGLEEAGPEVLEGRMRQQTDRALS EAHVALMLIDSRAGVTPLDAHFAEILRKAPIPVILVANKCEGGAGKPGFYESYSMGLGDPVPLSAEHGEGLSLLYEALMP IYDAHMAQEAKDEADAVRAAFLETEAASAAKPYIDFASLEPDEVPEDDDSDPSQDPEDDFSVEAFDPRGERPIQMAIIGR PNTGKSTLINRLIGDDRLVTGPEAGVTRDAIEVDWEWGGRRFRLVDTAGLRRKARVENSLEKLMVADTLNAIRLAEVCVL MLDANMVMDRQDLTIARLVIDEGRALVIAVNKWDACADRKAALQRLADRLETSLAQVRGVPFVTLSALEGHGLNRLMDAA LEAHAKWNRRVPTSRFNRWLKGMIDRHPLPMGKHGRRLRIRYGTQAKIRPPTFALFMTRPDDLPESYVRYLNSGLREDFD MAGTPIRLLFRATKNPYADK
Sequences:
>Translated_500_residues MFTVAIIGRPNVGKSTLFNRLCGRRLAIVHDMPGVTRDRREGKASLADLVFRVVDTAGLEEAGPEVLEGRMRQQTDRALS EAHVALMLIDSRAGVTPLDAHFAEILRKAPIPVILVANKCEGGAGKPGFYESYSMGLGDPVPLSAEHGEGLSLLYEALMP IYDAHMAQEAKDEADAVRAAFLETEAASAAKPYIDFASLEPDEVPEDDDSDPSQDPEDDFSVEAFDPRGERPIQMAIIGR PNTGKSTLINRLIGDDRLVTGPEAGVTRDAIEVDWEWGGRRFRLVDTAGLRRKARVENSLEKLMVADTLNAIRLAEVCVL MLDANMVMDRQDLTIARLVIDEGRALVIAVNKWDACADRKAALQRLADRLETSLAQVRGVPFVTLSALEGHGLNRLMDAA LEAHAKWNRRVPTSRFNRWLKGMIDRHPLPMGKHGRRLRIRYGTQAKIRPPTFALFMTRPDDLPESYVRYLNSGLREDFD MAGTPIRLLFRATKNPYADK >Mature_500_residues MFTVAIIGRPNVGKSTLFNRLCGRRLAIVHDMPGVTRDRREGKASLADLVFRVVDTAGLEEAGPEVLEGRMRQQTDRALS EAHVALMLIDSRAGVTPLDAHFAEILRKAPIPVILVANKCEGGAGKPGFYESYSMGLGDPVPLSAEHGEGLSLLYEALMP IYDAHMAQEAKDEADAVRAAFLETEAASAAKPYIDFASLEPDEVPEDDDSDPSQDPEDDFSVEAFDPRGERPIQMAIIGR PNTGKSTLINRLIGDDRLVTGPEAGVTRDAIEVDWEWGGRRFRLVDTAGLRRKARVENSLEKLMVADTLNAIRLAEVCVL MLDANMVMDRQDLTIARLVIDEGRALVIAVNKWDACADRKAALQRLADRLETSLAQVRGVPFVTLSALEGHGLNRLMDAA LEAHAKWNRRVPTSRFNRWLKGMIDRHPLPMGKHGRRLRIRYGTQAKIRPPTFALFMTRPDDLPESYVRYLNSGLREDFD MAGTPIRLLFRATKNPYADK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=499, Percent_Identity=37.4749498997996, Blast_Score=313, Evalue=1e-86, Organism=Escherichia coli, GI2367268, Length=162, Percent_Identity=35.1851851851852, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788919, Length=150, Percent_Identity=30.6666666666667, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 55456; Mature: 55456
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTVAIIGRPNVGKSTLFNRLCGRRLAIVHDMPGVTRDRREGKASLADLVFRVVDTAGLE CEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC EAGPEVLEGRMRQQTDRALSEAHVALMLIDSRAGVTPLDAHFAEILRKAPIPVILVANKC CCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECC EGGAGKPGFYESYSMGLGDPVPLSAEHGEGLSLLYEALMPIYDAHMAQEAKDEADAVRAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLETEAASAAKPYIDFASLEPDEVPEDDDSDPSQDPEDDFSVEAFDPRGERPIQMAIIGR HHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEC PNTGKSTLINRLIGDDRLVTGPEAGVTRDAIEVDWEWGGRRFRLVDTAGLRRKARVENSL CCCCHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHH EKLMVADTLNAIRLAEVCVLMLDANMVMDRQDLTIARLVIDEGRALVIAVNKWDACADRK HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHH AALQRLADRLETSLAQVRGVPFVTLSALEGHGLNRLMDAALEAHAKWNRRVPTSRFNRWL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH KGMIDRHPLPMGKHGRRLRIRYGTQAKIRPPTFALFMTRPDDLPESYVRYLNSGLREDFD HHHHHCCCCCCCCCCCEEEEEECCCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH MAGTPIRLLFRATKNPYADK CCCCHHHHHEECCCCCCCCC >Mature Secondary Structure MFTVAIIGRPNVGKSTLFNRLCGRRLAIVHDMPGVTRDRREGKASLADLVFRVVDTAGLE CEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC EAGPEVLEGRMRQQTDRALSEAHVALMLIDSRAGVTPLDAHFAEILRKAPIPVILVANKC CCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECC EGGAGKPGFYESYSMGLGDPVPLSAEHGEGLSLLYEALMPIYDAHMAQEAKDEADAVRAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLETEAASAAKPYIDFASLEPDEVPEDDDSDPSQDPEDDFSVEAFDPRGERPIQMAIIGR HHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEC PNTGKSTLINRLIGDDRLVTGPEAGVTRDAIEVDWEWGGRRFRLVDTAGLRRKARVENSL CCCCHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHH EKLMVADTLNAIRLAEVCVLMLDANMVMDRQDLTIARLVIDEGRALVIAVNKWDACADRK HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHH AALQRLADRLETSLAQVRGVPFVTLSALEGHGLNRLMDAALEAHAKWNRRVPTSRFNRWL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH KGMIDRHPLPMGKHGRRLRIRYGTQAKIRPPTFALFMTRPDDLPESYVRYLNSGLREDFD HHHHHCCCCCCCCCCCEEEEEECCCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH MAGTPIRLLFRATKNPYADK CCCCHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA