| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594351
Identifier: 83594351
GI number: 83594351
Start: 3477618
End: 3479663
Strand: Reverse
Name: 83594351
Synonym: Rru_A3021
Alternate gene names: NA
Gene position: 3479663-3477618 (Counterclockwise)
Preceding gene: 83594359
Following gene: 83594345
Centisome position: 79.94
GC content: 41.98
Gene sequence:
>2046_bases TTGGTAATTCTAAATTTTAATAAGGATATGTTTATGAGTGGCGGCACCAATAAAAGGTATCAGAGTTTTTTAGACGCAAT AAAGCATTACGATATTTCTAAAGCTGTCGCAAATTTAGAGTTTCTAAGTACAGAAGACATTAAAAAAGCGATTGATATTC AGTTAAGCCGCCCAGGGGCCTTTCAAATTCTCGGAGATCGCAGCAAGAGAGACGATTTTTATAAAAAATTATTGACTGCG CCTGCGCTTATTTACCGTCATGCTGACGCGCAAGCATTCGCCTTGGGCCTTCACAGTAAGATTATGAAGATCGAGCGATG CTTTGATCAAATTCGGGCATCCTTGCCGGAATGCGATATCTCTAAATACCCGGAAGATGTCCAATTCTGGAGCCATATCG AACGCGCAACGCAGGAGCTCCAATATTTGCAGAAAAAATTAGATTCTATAGGCGAGGAATTTTTTAAATCCCGGGCGCCT GTCCTGATTCCACAGGTGATTATAATCGAGGGGCCATCGGGCGAAAAGATCGATGCCGATTCTGCGTTTCACTGTGTCAT CGAAAATTTAAGTCTGTCTTTAAAAATGCTTTCCTATGAGTATAATTTATACGTGAATGAAAAGGTGGTCGGCCCTCAGA AGCCAGAGATAACAGATGAGCACATTTATAAATCTGGACCTATTCAATTGTTAGCCAGTTCATGGAGTGCGCTTGAGGAT ATTGCTAACCGTACATTATTGTTTGGTGGTGAAATCTCAAGCTTTGACGATATTGGAATTTCTCCAGAGAGAAGCCATGA AGCTTTTTTTAAAAAGTTCAAAGATGGAAGTGTTTTTAATCGCGGGGTTACAGAAAGAGAGGTATTCGATCTCATTGCCA ATCGCCGGCTTCACGCGTTCCTGCTTCAGTCTGCTTTTTTTTCATCTAGAGATAATCTATGCGGTATCGTCATGGCTGAA GGCGAGAAAGTACCCAATCTTTTAGTTAGGCGTTTTATTTCGATAGATGAAGCACTCGCTCTGGAAGCTCTTCAGGAAAT CCTCTCTTACGACATTGTTGAAGACAACGAGCGATACCATGGCCTAACCATGCGAGAGTGGGTGCGAGGTTATTCGTCAC TCAAGTTTATGGCGATGTCTAAGCCAGATGATTCTTGTTGGTTAACGTTTGAGAAGCCGGAACTGGAGCAGCATTTTAGA GAATTCGAACTTCCGAAATCTTGCATCCCAGCCTTGATTGGCCATCTGACCTTTGGCAAGGATAGTCGCGATCTCTGGGA TTCTCCGCTGATTCGGTCGCAAGGTGACAAGTTCACGATCCTCGTACAGGCATTGAAGGAGAGCAATCTTCCAAACGTAA TTCTTTCGAGGTTGGCTTCTCTGACCACTCGATTCAACAGGAAAGGAAAGAGCTTTGAGAATAAAATCATATCATTTTTC AGAAATAAGGGTTATCAATGCGAATCAAAAAAATTTAACATTGACGGTAGTCAATATGAATATGATGCCTTGCTGATAAT TGACGATACCATATTTCTGATTGAATGTAAAAACAGGACTATTTCTGGGAATCATGCTGTTCAGGCTTTCCGCTACGCGG AGTTCATCACGGAGACAGTAAAGCAAGTTCAGCGTCTCGAAAAGGGACTTAGGGAGCGGCCTGATATTGTAAAATCAGTT TTCAATAAAGATCTTTCTGAGCTGAAATTAGTGCCGCTTATCATAAATTCATTGACATATTCGAGGCCCCCTATTGAGGG GGTTTACATTTCTGACTTCTCTGCAATAAGAAAATTCTTCGACAAGGAAATCTCGCGGTGGGTGAAGAAAGATGACGTAT TTGTTAAAGGGGAGGTCATGCACCAGATGTGGGTTGGTGAGCACCCAACTGCCAAAGAATTTCTGGAATATTTATTGTCT CCTCCTCAGATAAATTTTTTCATGAAAAATTTGACATACAAAGCCTATCCGCACCCTACTTCCGAAGAGGCGGTGTTCGT CTCTGGTTTTCTGGATATCGACGAAACTGCTGTTGTAGAGAGCTAA
Upstream 100 bases:
>100_bases CTCCAATATAGGATCATGGGTGTAGCACCTCATGGAGTGCGGTACTTCATCTGGGAAACATTCCAATGCAGGTCAATCTA GGTGATCTGTCATACAAGGC
Downstream 100 bases:
>100_bases GAAAAAGGTTGCCGAAGCCAGTTGATTGGTAATTACCCCGCATGCGCCTGATTGAACTGGGCGGGATGAAGGTTGCTCGT CCACCTTGGCCGGCTTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MVILNFNKDMFMSGGTNKRYQSFLDAIKHYDISKAVANLEFLSTEDIKKAIDIQLSRPGAFQILGDRSKRDDFYKKLLTA PALIYRHADAQAFALGLHSKIMKIERCFDQIRASLPECDISKYPEDVQFWSHIERATQELQYLQKKLDSIGEEFFKSRAP VLIPQVIIIEGPSGEKIDADSAFHCVIENLSLSLKMLSYEYNLYVNEKVVGPQKPEITDEHIYKSGPIQLLASSWSALED IANRTLLFGGEISSFDDIGISPERSHEAFFKKFKDGSVFNRGVTEREVFDLIANRRLHAFLLQSAFFSSRDNLCGIVMAE GEKVPNLLVRRFISIDEALALEALQEILSYDIVEDNERYHGLTMREWVRGYSSLKFMAMSKPDDSCWLTFEKPELEQHFR EFELPKSCIPALIGHLTFGKDSRDLWDSPLIRSQGDKFTILVQALKESNLPNVILSRLASLTTRFNRKGKSFENKIISFF RNKGYQCESKKFNIDGSQYEYDALLIIDDTIFLIECKNRTISGNHAVQAFRYAEFITETVKQVQRLEKGLRERPDIVKSV FNKDLSELKLVPLIINSLTYSRPPIEGVYISDFSAIRKFFDKEISRWVKKDDVFVKGEVMHQMWVGEHPTAKEFLEYLLS PPQINFFMKNLTYKAYPHPTSEEAVFVSGFLDIDETAVVES
Sequences:
>Translated_681_residues MVILNFNKDMFMSGGTNKRYQSFLDAIKHYDISKAVANLEFLSTEDIKKAIDIQLSRPGAFQILGDRSKRDDFYKKLLTA PALIYRHADAQAFALGLHSKIMKIERCFDQIRASLPECDISKYPEDVQFWSHIERATQELQYLQKKLDSIGEEFFKSRAP VLIPQVIIIEGPSGEKIDADSAFHCVIENLSLSLKMLSYEYNLYVNEKVVGPQKPEITDEHIYKSGPIQLLASSWSALED IANRTLLFGGEISSFDDIGISPERSHEAFFKKFKDGSVFNRGVTEREVFDLIANRRLHAFLLQSAFFSSRDNLCGIVMAE GEKVPNLLVRRFISIDEALALEALQEILSYDIVEDNERYHGLTMREWVRGYSSLKFMAMSKPDDSCWLTFEKPELEQHFR EFELPKSCIPALIGHLTFGKDSRDLWDSPLIRSQGDKFTILVQALKESNLPNVILSRLASLTTRFNRKGKSFENKIISFF RNKGYQCESKKFNIDGSQYEYDALLIIDDTIFLIECKNRTISGNHAVQAFRYAEFITETVKQVQRLEKGLRERPDIVKSV FNKDLSELKLVPLIINSLTYSRPPIEGVYISDFSAIRKFFDKEISRWVKKDDVFVKGEVMHQMWVGEHPTAKEFLEYLLS PPQINFFMKNLTYKAYPHPTSEEAVFVSGFLDIDETAVVES >Mature_681_residues MVILNFNKDMFMSGGTNKRYQSFLDAIKHYDISKAVANLEFLSTEDIKKAIDIQLSRPGAFQILGDRSKRDDFYKKLLTA PALIYRHADAQAFALGLHSKIMKIERCFDQIRASLPECDISKYPEDVQFWSHIERATQELQYLQKKLDSIGEEFFKSRAP VLIPQVIIIEGPSGEKIDADSAFHCVIENLSLSLKMLSYEYNLYVNEKVVGPQKPEITDEHIYKSGPIQLLASSWSALED IANRTLLFGGEISSFDDIGISPERSHEAFFKKFKDGSVFNRGVTEREVFDLIANRRLHAFLLQSAFFSSRDNLCGIVMAE GEKVPNLLVRRFISIDEALALEALQEILSYDIVEDNERYHGLTMREWVRGYSSLKFMAMSKPDDSCWLTFEKPELEQHFR EFELPKSCIPALIGHLTFGKDSRDLWDSPLIRSQGDKFTILVQALKESNLPNVILSRLASLTTRFNRKGKSFENKIISFF RNKGYQCESKKFNIDGSQYEYDALLIIDDTIFLIECKNRTISGNHAVQAFRYAEFITETVKQVQRLEKGLRERPDIVKSV FNKDLSELKLVPLIINSLTYSRPPIEGVYISDFSAIRKFFDKEISRWVKKDDVFVKGEVMHQMWVGEHPTAKEFLEYLLS PPQINFFMKNLTYKAYPHPTSEEAVFVSGFLDIDETAVVES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78321; Mature: 78321
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVILNFNKDMFMSGGTNKRYQSFLDAIKHYDISKAVANLEFLSTEDIKKAIDIQLSRPGA CEEEECCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHCEEECCCCC FQILGDRSKRDDFYKKLLTAPALIYRHADAQAFALGLHSKIMKIERCFDQIRASLPECDI EEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SKYPEDVQFWSHIERATQELQYLQKKLDSIGEEFFKSRAPVLIPQVIIIEGPSGEKIDAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEEECCCCCCCCCC SAFHCVIENLSLSLKMLSYEYNLYVNEKVVGPQKPEITDEHIYKSGPIQLLASSWSALED HHHHHHHHHHHHEEEEEEEEEEEEECCEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH IANRTLLFGGEISSFDDIGISPERSHEAFFKKFKDGSVFNRGVTEREVFDLIANRRLHAF HHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHH LLQSAFFSSRDNLCGIVMAEGEKVPNLLVRRFISIDEALALEALQEILSYDIVEDNERYH HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GLTMREWVRGYSSLKFMAMSKPDDSCWLTFEKPELEQHFREFELPKSCIPALIGHLTFGK CCHHHHHHCCHHHEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCC DSRDLWDSPLIRSQGDKFTILVQALKESNLPNVILSRLASLTTRFNRKGKSFENKIISFF CCHHHCCCCCHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RNKGYQCESKKFNIDGSQYEYDALLIIDDTIFLIECKNRTISGNHAVQAFRYAEFITETV HCCCCCCCCCEECCCCCCEEEEEEEEEECEEEEEEECCCEECCCHHHHHHHHHHHHHHHH KQVQRLEKGLRERPDIVKSVFNKDLSELKLVPLIINSLTYSRPPIEGVYISDFSAIRKFF HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH DKEISRWVKKDDVFVKGEVMHQMWVGEHPTAKEFLEYLLSPPQINFFMKNLTYKAYPHPT HHHHHHHHHHCCEEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEECCCCC SEEAVFVSGFLDIDETAVVES CCCEEEEEECCCCCCHHHCCC >Mature Secondary Structure MVILNFNKDMFMSGGTNKRYQSFLDAIKHYDISKAVANLEFLSTEDIKKAIDIQLSRPGA CEEEECCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHCEEECCCCC FQILGDRSKRDDFYKKLLTAPALIYRHADAQAFALGLHSKIMKIERCFDQIRASLPECDI EEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SKYPEDVQFWSHIERATQELQYLQKKLDSIGEEFFKSRAPVLIPQVIIIEGPSGEKIDAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEEECCCCCCCCCC SAFHCVIENLSLSLKMLSYEYNLYVNEKVVGPQKPEITDEHIYKSGPIQLLASSWSALED HHHHHHHHHHHHEEEEEEEEEEEEECCEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH IANRTLLFGGEISSFDDIGISPERSHEAFFKKFKDGSVFNRGVTEREVFDLIANRRLHAF HHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHH LLQSAFFSSRDNLCGIVMAEGEKVPNLLVRRFISIDEALALEALQEILSYDIVEDNERYH HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GLTMREWVRGYSSLKFMAMSKPDDSCWLTFEKPELEQHFREFELPKSCIPALIGHLTFGK CCHHHHHHCCHHHEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCC DSRDLWDSPLIRSQGDKFTILVQALKESNLPNVILSRLASLTTRFNRKGKSFENKIISFF CCHHHCCCCCHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RNKGYQCESKKFNIDGSQYEYDALLIIDDTIFLIECKNRTISGNHAVQAFRYAEFITETV HCCCCCCCCCEECCCCCCEEEEEEEEEECEEEEEEECCCEECCCHHHHHHHHHHHHHHHH KQVQRLEKGLRERPDIVKSVFNKDLSELKLVPLIINSLTYSRPPIEGVYISDFSAIRKFF HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH DKEISRWVKKDDVFVKGEVMHQMWVGEHPTAKEFLEYLLSPPQINFFMKNLTYKAYPHPT HHHHHHHHHHCCEEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEECCCCC SEEAVFVSGFLDIDETAVVES CCCEEEEEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA