Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is ykgJ [C]

Identifier: 83594338

GI number: 83594338

Start: 3465533

End: 3465844

Strand: Reverse

Name: ykgJ [C]

Synonym: Rru_A3008

Alternate gene names: 83594338

Gene position: 3465844-3465533 (Counterclockwise)

Preceding gene: 83594340

Following gene: 83594336

Centisome position: 79.62

GC content: 69.87

Gene sequence:

>312_bases
ATGCTGGATTGCCGGTTTTGCGGAGCGTGCTGCGCGTTTTCACGGTTTTGGCCGGTGCTGCGGCCAAGCGACCGCCTGGG
CGAGGGGGGCATTCCCCCGGAGCTGACCACCGCCGAGGGCGCGCGCATGCTGTGTGAGGGCGACCGCTGCGTGGCCCTTC
AGGGAACCCTGGGCGACAGGGTGTCTTGCGCGATTTACGCCAATCGGCCCGAGGCCTGCCAATCCTTCAGCCCCGGCGGC
CGCGCCTGCCATCTCGCCCGTCAGGAGGTGGGGTTGGAGGTCCGGGCGTTTGGCCGCCGGGAGGCGTTCTGA

Upstream 100 bases:

>100_bases
AAACCCGCCAGCATGGGCTTTCGCAAAAGGAGAAATTTGGGCCGCATCTTCCCTTTTTAAGGGAAGATTGGTCCATGGGA
TCAGTGAGAGTGGCCTTTTA

Downstream 100 bases:

>100_bases
GTTATCCCCGTTCGACGGGAACGGCGACCTCGTTGCGGCGCAAGAACGGCAGGCTGAACGGCGGATCATAGAAATAGGCC
ACCGCCTCGCCGCTGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MLDCRFCGACCAFSRFWPVLRPSDRLGEGGIPPELTTAEGARMLCEGDRCVALQGTLGDRVSCAIYANRPEACQSFSPGG
RACHLARQEVGLEVRAFGRREAF

Sequences:

>Translated_103_residues
MLDCRFCGACCAFSRFWPVLRPSDRLGEGGIPPELTTAEGARMLCEGDRCVALQGTLGDRVSCAIYANRPEACQSFSPGG
RACHLARQEVGLEVRAFGRREAF
>Mature_103_residues
MLDCRFCGACCAFSRFWPVLRPSDRLGEGGIPPELTTAEGARMLCEGDRCVALQGTLGDRVSCAIYANRPEACQSFSPGG
RACHLARQEVGLEVRAFGRREAF

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11200; Mature: 11200

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
8.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDCRFCGACCAFSRFWPVLRPSDRLGEGGIPPELTTAEGARMLCEGDRCVALQGTLGDR
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCC
VSCAIYANRPEACQSFSPGGRACHLARQEVGLEVRAFGRREAF
EEEEEEECCCHHHHCCCCCCCEEEHHHHHHCEEEEECCCCCCC
>Mature Secondary Structure
MLDCRFCGACCAFSRFWPVLRPSDRLGEGGIPPELTTAEGARMLCEGDRCVALQGTLGDR
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCC
VSCAIYANRPEACQSFSPGGRACHLARQEVGLEVRAFGRREAF
EEEEEEECCCHHHHCCCCCCCEEEHHHHHHCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA